RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 LACTBP83111 547 aaPredicted RBP11.16□□□□□ -0.62
PRIM1-208ENST00000552590 CAMK2BQ13554 666 aa11.16□□□□□ -0.62
PRIM1-208ENST00000552590 KIF22Q14807 665 aa11.16□□□□□ -0.62
PRIM1-208ENST00000552590 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
PRIM1-208ENST00000552590 SPRYD3Q8NCJ5 442 aa11.16□□□□□ -0.62
PRIM1-208ENST00000552590 UTP14AQ9BVJ6 771 aaKnown RBP11.16□□□□□ -0.62
PRIM1-208ENST00000552590 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
PRIM1-208ENST00000552590 BIN2Q9UBW5 565 aaPredicted RBP11.16□□□□□ -0.62
PRIM1-208ENST00000552590 SASH1O94885 1247 aa11.15□□□□□ -0.62
PRIM1-208ENST00000552590 SGPL1O95470 568 aa11.15□□□□□ -0.62
PRIM1-208ENST00000552590 MAP3K11Q16584 847 aa11.15□□□□□ -0.62
PRIM1-208ENST00000552590 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
PRIM1-208ENST00000552590 TBC1D16Q8TBP0 767 aa11.15□□□□□ -0.62
PRIM1-208ENST00000552590 UNC93B1Q9H1C4 597 aa11.15□□□□□ -0.62
PRIM1-208ENST00000552590 RIPOR2Q9Y4F9 1068 aa11.15□□□□□ -0.62
PRIM1-208ENST00000552590 PRMT2P55345 433 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 PARP10Q53GL7 1025 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 MORC1Q86VD1 984 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 RAET1EQ8TD07 263 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 BRI3BPQ8WY22 251 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 PAWRQ96IZ0 340 aaKnown RBP11.14□□□□□ -0.63
PRIM1-208ENST00000552590 DACH1Q9UI36 760 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 RRP7AQ9Y3A4 280 aaKnown RBP11.14□□□□□ -0.63
PRIM1-208ENST00000552590 CEMIPQ8WUJ3 1361 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 DNAH12Q6ZR08 3092 aa11.14□□□□□ -0.63
PRIM1-208ENST00000552590 GNRH1P01148 92 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
PRIM1-208ENST00000552590 CTGFP29279 349 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 NUDT18Q6ZVK8 323 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 CELF1Q92879 486 aaKnown RBP11.13□□□□□ -0.63
PRIM1-208ENST00000552590 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
PRIM1-208ENST00000552590 SRRDQ9UH36 339 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 SSC5DA1L4H1 1573 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 PSME4Q14997 1843 aa11.13□□□□□ -0.63
PRIM1-208ENST00000552590 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
PRIM1-208ENST00000552590 MYL6BP14649 208 aa11.12□□□□□ -0.63
PRIM1-208ENST00000552590 UBXN2AP68543 259 aa11.12□□□□□ -0.63
PRIM1-208ENST00000552590 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
PRIM1-208ENST00000552590 APOBEC3FQ8IUX4 373 aaKnown RBP11.12□□□□□ -0.63
PRIM1-208ENST00000552590 MYLIPQ8WY64 445 aa11.12□□□□□ -0.63
PRIM1-208ENST00000552590 MXD3Q9BW11 206 aa11.12□□□□□ -0.63
PRIM1-208ENST00000552590 ALYREFQ86V81 257 aaKnown RBP11.12□□□□□ -0.63
PRIM1-208ENST00000552590 GAS2L2Q8NHY3 880 aa11.12□□□□□ -0.63
PRIM1-208ENST00000552590 DIS3LQ8TF46 1054 aaKnown RBP11.12□□□□□ -0.63
PRIM1-208ENST00000552590 TRIM47Q96LD4 638 aa11.12□□□□□ -0.63
PRIM1-208ENST00000552590 CCL15-CCL14A0A0B4J2E2 113 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 USP17L4A6NCW7 530 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 TLR2O60603 784 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 OSBPP22059 807 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 PSMC4P43686 418 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 CCL15Q16663 113 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 USP17L1Q7RTZ2 530 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 DEFB129Q9H1M3 183 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 PCDHB3Q9Y5E6 796 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 COL4A1P02462 1669 aa11.11□□□□□ -0.63
PRIM1-208ENST00000552590 UFL1O94874 794 aa11.1□□□□□ -0.63
PRIM1-208ENST00000552590 SWT1Q5T5J6 900 aaKnown RBP11.1□□□□□ -0.63
PRIM1-208ENST00000552590 NECAB2Q7Z6G3 386 aa11.1□□□□□ -0.63
PRIM1-208ENST00000552590 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
PRIM1-208ENST00000552590 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
PRIM1-208ENST00000552590 POLR3GLQ9BT43 218 aa11.1□□□□□ -0.63
PRIM1-208ENST00000552590 SEMA6BQ9H3T3 888 aa11.1□□□□□ -0.63
PRIM1-208ENST00000552590 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
PRIM1-208ENST00000552590 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
PRIM1-208ENST00000552590 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
PRIM1-208ENST00000552590 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
PRIM1-208ENST00000552590 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
PRIM1-208ENST00000552590 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
PRIM1-208ENST00000552590 USP2O75604 605 aaPredicted RBP11.08□□□□□ -0.64
PRIM1-208ENST00000552590 FMNL1O95466 1100 aaPredicted RBP11.08□□□□□ -0.64
PRIM1-208ENST00000552590 FOSL2P15408 326 aa11.08□□□□□ -0.64
PRIM1-208ENST00000552590 IREB2P48200 963 aaKnown RBP11.08□□□□□ -0.64
PRIM1-208ENST00000552590 ANKRD13AQ8IZ07 590 aa11.08□□□□□ -0.64
PRIM1-208ENST00000552590 HCN4Q9Y3Q4 1203 aa11.08□□□□□ -0.64
PRIM1-208ENST00000552590 COL2A1P02458 1487 aaPredicted RBP11.08□□□□□ -0.64
PRIM1-208ENST00000552590 CACNA1GO43497 2377 aa11.08□□□□□ -0.64
PRIM1-208ENST00000552590 WDHD1O75717 1129 aaPredicted RBP11.07□□□□□ -0.64
PRIM1-208ENST00000552590 HOXD10P28358 340 aa11.07□□□□□ -0.64
PRIM1-208ENST00000552590 MDM2Q00987 491 aaPredicted RBP11.07□□□□□ -0.64
PRIM1-208ENST00000552590 BLOC1S3Q6QNY0 202 aa11.07□□□□□ -0.64
PRIM1-208ENST00000552590 USP38Q8NB14 1042 aa11.07□□□□□ -0.64
PRIM1-208ENST00000552590 TRMT112Q9UI30 125 aaKnown RBP11.07□□□□□ -0.64
PRIM1-208ENST00000552590 TLL1O43897 1013 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 S1PR4O95977 384 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 AVPP01185 164 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 GTF2A2P52657 109 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 PRKCZQ05513 592 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 NBPF12Q5TAG4 269 aaPredicted RBP11.06□□□□□ -0.64
PRIM1-208ENST00000552590 NLRP10Q86W26 655 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 PODXL2Q9NZ53 605 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 ANKIB1Q9P2G1 1089 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 CPA4Q9UI42 421 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 GGA1Q9UJY5 639 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 OTOFQ9HC10 1997 aa11.06□□□□□ -0.64
PRIM1-208ENST00000552590 SUPT20HL1Q3ZLR7 823 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms