RNA–Protein interactions for RNA: ENST00000551861.1

ITGA5-208, Transcript of integrin subunit alpha 5, human

TSL 4

Gene ITGA5, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGA5-208	ENST00000551861	RFX5	P48382	616 aa	Predicted RBP	13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	PPAT	Q06203	517 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	PPIL2	Q13356	520 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	SLC9C1	Q4G0N8	1177 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	MIGA2	Q7L4E1	593 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	FAM43A	Q8N2R8	423 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	ZGPAT	Q8N5A5	531 aa	Known RBP	13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	FAM151A	Q8WW52	585 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	ZCCHC17	Q9NP64	241 aa	Known RBP	13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	PCDH10	Q9P2E7	1040 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	DENND2A	Q9ULE3	1009 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	SNCAIP	Q9Y6H5	919 aa		13.75	□□□□□ -0.21
ITGA5-208	ENST00000551861	IRF6	O14896	467 aa		13.74	□□□□□ -0.21
ITGA5-208	ENST00000551861	SEMA3E	O15041	775 aa		13.74	□□□□□ -0.21
ITGA5-208	ENST00000551861	IL15	P40933	162 aa	Predicted RBP	13.74	□□□□□ -0.21
ITGA5-208	ENST00000551861	TCP10	Q12799	353 aa		13.74	□□□□□ -0.21
ITGA5-208	ENST00000551861	ARMC5	Q96C12	935 aa		13.74	□□□□□ -0.21
ITGA5-208	ENST00000551861	NOB1	Q9ULX3	412 aa	Known RBP	13.74	□□□□□ -0.21
ITGA5-208	ENST00000551861	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.73	□□□□□ -0.21
ITGA5-208	ENST00000551861	TLR2	O60603	784 aa		13.73	□□□□□ -0.21
ITGA5-208	ENST00000551861	GNRH1	P01148	92 aa		13.73	□□□□□ -0.21
ITGA5-208	ENST00000551861	SLC4A8	Q2Y0W8	1093 aa		13.73	□□□□□ -0.21
ITGA5-208	ENST00000551861	SLF2	Q8IX21	1173 aa		13.73	□□□□□ -0.21
ITGA5-208	ENST00000551861	CDCA7L	Q96GN5	454 aa		13.73	□□□□□ -0.21
ITGA5-208	ENST00000551861	USP40	Q9NVE5	1235 aa		13.73	□□□□□ -0.21
ITGA5-208	ENST00000551861	POTEF	A5A3E0	1075 aa		13.72	□□□□□ -0.21
ITGA5-208	ENST00000551861	BTBD19	C9JJ37	291 aa		13.72	□□□□□ -0.21
ITGA5-208	ENST00000551861	DIXDC1	Q155Q3	683 aa		13.72	□□□□□ -0.21
ITGA5-208	ENST00000551861	ATG9A	Q7Z3C6	839 aa		13.72	□□□□□ -0.21
ITGA5-208	ENST00000551861	DAGLA	Q9Y4D2	1042 aa		13.72	□□□□□ -0.21
ITGA5-208	ENST00000551861	LRRFIP2	Q9Y608	721 aa	Known RBP	13.72	□□□□□ -0.21
ITGA5-208	ENST00000551861	MYH13	Q9UKX3	1938 aa		13.72	□□□□□ -0.21
ITGA5-208	ENST00000551861	CENPF	P49454	3210 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	AK9	Q5TCS8	1911 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	HOXD10	P28358	340 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	PRDX5	P30044	214 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	PRMT2	P55345	433 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	CDC42EP5	Q6NZY7	148 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	DZIP1	Q86YF9	867 aa	Known RBP	13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	ABCF2	Q9UG63	623 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	AKAP2	Q9Y2D5	859 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	PTCH2	Q9Y6C5	1203 aa		13.71	□□□□□ -0.21
ITGA5-208	ENST00000551861	SALL1	Q9NSC2	1324 aa		13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	GNAI3	P08754	354 aa		13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	EN2	P19622	333 aa	Predicted RBP	13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	INPP5B	P32019	993 aa		13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	LACTB	P83111	547 aa	Predicted RBP	13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	ANKRD23	Q86SG2	305 aa		13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	ZNF333	Q96JL9	665 aa		13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	COPRS	Q9NQ92	184 aa		13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	PICK1	Q9NRD5	415 aa		13.7	□□□□□ -0.22
ITGA5-208	ENST00000551861	PDHX	O00330	501 aa		13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	FMNL1	O95466	1100 aa	Predicted RBP	13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	PHKA1	P46020	1223 aa		13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	NFIA	Q12857	509 aa		13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	CCDC102B	Q68D86	513 aa		13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	YTHDC1	Q96MU7	727 aa	Known RBP	13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	ZNF112	Q9UJU3	913 aa		13.69	□□□□□ -0.22
ITGA5-208	ENST00000551861	IPO8	O15397	1037 aa	Known RBP	13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	SRGAP3	O43295	1099 aa		13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	ENTPD3	O75355	529 aa		13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	ECM2	O94769	699 aa	Predicted RBP	13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	MYC	P01106	439 aa	Predicted RBP	13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	NOL9	Q5SY16	702 aa	Known RBP	13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	GORAB	Q5T7V8	394 aa		13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	TRMT2A	Q8IZ69	625 aa	Known RBP	13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	RAET1E	Q8TD07	263 aa		13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	ARHGAP45	Q92619	1136 aa		13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	PARK7	Q99497	189 aa	Known RBP	13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	CPA4	Q9UI42	421 aa		13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	PA2G4	Q9UQ80	394 aa	Known RBP	13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	HTT	P42858	3142 aa		13.68	□□□□□ -0.22
ITGA5-208	ENST00000551861	CXCL11	O14625	94 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	PSMC4	P43686	418 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	RGS3	P49796	1198 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	TIMM10	P62072	90 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	MVP	Q14764	893 aa	Known RBP	13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	ERICH6	Q7L0X2	663 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	FASTKD5	Q7L8L6	764 aa	Known RBP	13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	SH3TC2	Q8TF17	1288 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	NEUROD6	Q96NK8	337 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	MEIS3	Q99687	375 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	IDI2	Q9BXS1	227 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	FAM198A	Q9UFP1	575 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	KCNH4	Q9UQ05	1017 aa		13.67	□□□□□ -0.22
ITGA5-208	ENST00000551861	KIAA0100	Q14667	2235 aa	Known RBP	13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861		A0A1B0GUL7	405 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	ZBTB22	O15209	634 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	ADORA1	P30542	326 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	CAP1	Q01518	475 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	PICALM	Q13492	652 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	C17orf99	Q6UX52	265 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	SCYL3	Q8IZE3	742 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	XAGE2	Q96GT9	111 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	ARHGAP39	Q9C0H5	1083 aa		13.66	□□□□□ -0.22
ITGA5-208	ENST00000551861	ZHX2	Q9Y6X8	837 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms