RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.33
DDX54-208ENST00000551344 ZNF512BQ96KM6 892 aaPredicted RBP23.33■■□□□ 1.33
DDX54-208ENST00000551344 DBNDD2Q9BQY9 259 aa23.33■■□□□ 1.33
DDX54-208ENST00000551344 SSC5DA1L4H1 1573 aa23.32■■□□□ 1.32
DDX54-208ENST00000551344 MCAMP43121 646 aa23.32■■□□□ 1.32
DDX54-208ENST00000551344 TTC39AQ5SRH9 613 aa23.32■■□□□ 1.32
DDX54-208ENST00000551344 HOOK2Q96ED9 719 aa23.32■■□□□ 1.32
DDX54-208ENST00000551344 EXOC6BQ9Y2D4 811 aa23.32■■□□□ 1.32
DDX54-208ENST00000551344 SIRT2Q8IXJ6 389 aa23.31■■□□□ 1.32
DDX54-208ENST00000551344 ANKRD13AQ8IZ07 590 aa23.31■■□□□ 1.32
DDX54-208ENST00000551344 EAF2Q96CJ1 260 aaPredicted RBP23.31■■□□□ 1.32
DDX54-208ENST00000551344 USP40Q9NVE5 1235 aa23.31■■□□□ 1.32
DDX54-208ENST00000551344 SAGE1Q9NXZ1 904 aa23.31■■□□□ 1.32
DDX54-208ENST00000551344 GAKO14976 1311 aa23.31■■□□□ 1.32
DDX54-208ENST00000551344 IFFO2Q5TF58 517 aa23.3■■□□□ 1.32
DDX54-208ENST00000551344 SPRYD7Q5W111 196 aa23.3■■□□□ 1.32
DDX54-208ENST00000551344 PI16Q6UXB8 463 aa23.3■■□□□ 1.32
DDX54-208ENST00000551344 CDAN1Q8IWY9 1227 aa23.3■■□□□ 1.32
DDX54-208ENST00000551344 FAM151AQ8WW52 585 aa23.3■■□□□ 1.32
DDX54-208ENST00000551344 LDHCP07864 332 aa23.29■■□□□ 1.32
DDX54-208ENST00000551344 TM4SF4P48230 202 aa23.29■■□□□ 1.32
DDX54-208ENST00000551344 GSTO1P78417 241 aa23.29■■□□□ 1.32
DDX54-208ENST00000551344 MECOMQ03112 1051 aa23.29■■□□□ 1.32
DDX54-208ENST00000551344 TBC1D9Q6ZT07 1266 aa23.29■■□□□ 1.32
DDX54-208ENST00000551344 TNS4Q8IZW8 715 aa23.29■■□□□ 1.32
DDX54-208ENST00000551344 CCDC8Q9H0W5 538 aaPredicted RBP23.29■■□□□ 1.32
DDX54-208ENST00000551344 RNF186Q9NXI6 227 aa23.29■■□□□ 1.32
DDX54-208ENST00000551344 DBNLQ9UJU6 430 aaKnown RBP23.29■■□□□ 1.32
DDX54-208ENST00000551344 IGSF3O75054 1194 aa23.28■■□□□ 1.32
DDX54-208ENST00000551344 RHPN1Q8TCX5 695 aa23.28■■□□□ 1.32
DDX54-208ENST00000551344 CLMNQ96JQ2 1002 aa23.28■■□□□ 1.32
DDX54-208ENST00000551344 LRP2BPQ9P2M1 347 aa23.28■■□□□ 1.32
DDX54-208ENST00000551344 TSKSQ9UJT2 592 aa23.28■■□□□ 1.32
DDX54-208ENST00000551344 GPR75-ASB3A0A0A6YYF3 556 aa23.27■■□□□ 1.32
DDX54-208ENST00000551344 RAB11FIP3O75154 756 aa23.27■■□□□ 1.32
DDX54-208ENST00000551344 ZBTB48P10074 688 aaPredicted RBP23.27■■□□□ 1.32
DDX54-208ENST00000551344 INHBEP58166 350 aa23.27■■□□□ 1.32
DDX54-208ENST00000551344 MAP3K9P80192 1104 aa23.27■■□□□ 1.32
DDX54-208ENST00000551344 NSUN4Q96CB9 384 aaKnown RBP23.27■■□□□ 1.32
DDX54-208ENST00000551344 KIF1BPQ96EK5 621 aa23.27■■□□□ 1.32
DDX54-208ENST00000551344 IDI2Q9BXS1 227 aa23.27■■□□□ 1.32
DDX54-208ENST00000551344 RAI14Q9P0K7 980 aa23.27■■□□□ 1.32
DDX54-208ENST00000551344 RPAP1Q9BWH6 1393 aaPredicted RBP23.27■■□□□ 1.31
DDX54-208ENST00000551344 TRPA1O75762 1119 aa23.26■■□□□ 1.31
DDX54-208ENST00000551344 SREBF2Q12772 1141 aa23.26■■□□□ 1.31
DDX54-208ENST00000551344 NFIAQ12857 509 aa23.26■■□□□ 1.31
DDX54-208ENST00000551344 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
DDX54-208ENST00000551344 SNRKQ9NRH2 765 aa23.26■■□□□ 1.31
DDX54-208ENST00000551344 MROH7-TTC4A0A0A0MT08 1334 aa23.26■■□□□ 1.31
DDX54-208ENST00000551344 MAP4K4O95819 1239 aaPredicted RBP23.25■■□□□ 1.31
DDX54-208ENST00000551344 TCP10Q12799 353 aa23.25■■□□□ 1.31
DDX54-208ENST00000551344 MKRN3Q13064 507 aaKnown RBP23.25■■□□□ 1.31
DDX54-208ENST00000551344 DCAF15Q66K64 600 aa23.25■■□□□ 1.31
DDX54-208ENST00000551344 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.25■■□□□ 1.31
DDX54-208ENST00000551344 AACSQ86V21 672 aa23.25■■□□□ 1.31
DDX54-208ENST00000551344 CLASRPQ8N2M8 674 aaKnown RBP23.25■■□□□ 1.31
DDX54-208ENST00000551344 ZNF384Q8TF68 577 aa23.25■■□□□ 1.31
DDX54-208ENST00000551344 WNK4Q96J92 1243 aa23.25■■□□□ 1.31
DDX54-208ENST00000551344 TLR7Q9NYK1 1049 aaKnown RBP23.25■■□□□ 1.31
DDX54-208ENST00000551344 FAM198AQ9UFP1 575 aa23.25■■□□□ 1.31
DDX54-208ENST00000551344 MYH2Q9UKX2 1941 aa23.24■■□□□ 1.31
DDX54-208ENST00000551344 MANSC4A6NHS7 340 aaPredicted RBP23.24■■□□□ 1.31
DDX54-208ENST00000551344 ENTPD3O75355 529 aa23.24■■□□□ 1.31
DDX54-208ENST00000551344 CYP2E1P05181 493 aaPredicted RBP23.24■■□□□ 1.31
DDX54-208ENST00000551344 BTDP43251 543 aa23.24■■□□□ 1.31
DDX54-208ENST00000551344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.24■■□□□ 1.31
DDX54-208ENST00000551344 IL1RAPL2Q9NP60 686 aa23.23■■□□□ 1.31
DDX54-208ENST00000551344 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.23■■□□□ 1.31
DDX54-208ENST00000551344 CSADQ9Y600 493 aa23.23■■□□□ 1.31
DDX54-208ENST00000551344 ZAP70P43403 619 aa23.22■■□□□ 1.31
DDX54-208ENST00000551344 ZNF341Q9BYN7 854 aa23.22■■□□□ 1.31
DDX54-208ENST00000551344 AKAP11Q9UKA4 1901 aa23.21■■□□□ 1.31
DDX54-208ENST00000551344 NPM3O75607 178 aaKnown RBP23.21■■□□□ 1.31
DDX54-208ENST00000551344 WDHD1O75717 1129 aaPredicted RBP23.21■■□□□ 1.31
DDX54-208ENST00000551344 RGS3P49796 1198 aa23.21■■□□□ 1.31
DDX54-208ENST00000551344 RHBDL3P58872 404 aa23.21■■□□□ 1.31
DDX54-208ENST00000551344 VGLL4Q14135 290 aa23.21■■□□□ 1.31
DDX54-208ENST00000551344 MIGA2Q7L4E1 593 aa23.21■■□□□ 1.31
DDX54-208ENST00000551344 ZFPM1Q8IX07 1006 aa23.21■■□□□ 1.31
DDX54-208ENST00000551344 ELP3Q9H9T3 547 aa23.21■■□□□ 1.31
DDX54-208ENST00000551344 APBB1O00213 710 aa23.2■■□□□ 1.3
DDX54-208ENST00000551344 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
DDX54-208ENST00000551344 OPTNQ96CV9 577 aa23.2■■□□□ 1.3
DDX54-208ENST00000551344 WRNIP1Q96S55 665 aa23.2■■□□□ 1.3
DDX54-208ENST00000551344 BAG3O95817 575 aa23.19■■□□□ 1.3
DDX54-208ENST00000551344 ALDH1A1P00352 501 aa23.19■■□□□ 1.3
DDX54-208ENST00000551344 IFIT2P09913 472 aaKnown RBP23.19■■□□□ 1.3
DDX54-208ENST00000551344 GJA5P36382 358 aa23.19■■□□□ 1.3
DDX54-208ENST00000551344 RRP1P56182 461 aaKnown RBP23.19■■□□□ 1.3
DDX54-208ENST00000551344 NOL10Q9BSC4 688 aaKnown RBP23.19■■□□□ 1.3
DDX54-208ENST00000551344 ZNF112Q9UJU3 913 aa23.19■■□□□ 1.3
DDX54-208ENST00000551344 PPP4CP60510 307 aa23.18■■□□□ 1.3
DDX54-208ENST00000551344 PIH1D3Q9NQM4 214 aaKnown RBP23.18■■□□□ 1.3
DDX54-208ENST00000551344 RFX7Q2KHR2 1363 aa23.17■■□□□ 1.3
DDX54-208ENST00000551344 TESPA1A2RU30 521 aaPredicted RBP23.17■■□□□ 1.3
DDX54-208ENST00000551344 PLCG2P16885 1265 aa23.17■■□□□ 1.3
DDX54-208ENST00000551344 TMED8Q6PL24 325 aaPredicted RBP23.17■■□□□ 1.3
DDX54-208ENST00000551344 ERO1BQ86YB8 467 aa23.17■■□□□ 1.3
DDX54-208ENST00000551344 IFNL1Q8IU54 200 aa23.17■■□□□ 1.3
DDX54-208ENST00000551344 ZSCAN29Q8IWY8 852 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms