RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 GAKO14976 1311 aa21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 CA12O43570 354 aa21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 RRP1P56182 461 aaKnown RBP21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 MAP3K11Q16584 847 aa21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 LDLRAD1Q5T700 205 aa21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 ERICH6Q7L0X2 663 aa21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 TEPSINQ96N21 525 aa21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 TLR7Q9NYK1 1049 aaKnown RBP21.14■□□□□ 0.97
CHMP1A-208ENST00000550102 IREB2P48200 963 aaKnown RBP21.13■□□□□ 0.97
CHMP1A-208ENST00000550102 COL13A1Q5TAT6 717 aaPredicted RBP21.13■□□□□ 0.97
CHMP1A-208ENST00000550102 CDC42EP5Q6NZY7 148 aa21.13■□□□□ 0.97
CHMP1A-208ENST00000550102 EAF2Q96CJ1 260 aaPredicted RBP21.13■□□□□ 0.97
CHMP1A-208ENST00000550102 ZNF512BQ96KM6 892 aaPredicted RBP21.13■□□□□ 0.97
CHMP1A-208ENST00000550102 ZIC5Q96T25 663 aa21.13■□□□□ 0.97
CHMP1A-208ENST00000550102 FZD1Q9UP38 647 aa21.13■□□□□ 0.97
CHMP1A-208ENST00000550102 MROH7-TTC4A0A0A0MT08 1334 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 CDK5RAP2Q96SN8 1893 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 KIF23Q02241 960 aaPredicted RBP21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 MECOMQ03112 1051 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 AACSQ86V21 672 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 CDAN1Q8IWY9 1227 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 RHPN1Q8TCX5 695 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 KIF1BPQ96EK5 621 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 FOCADQ5VW36 1801 aa21.12■□□□□ 0.97
CHMP1A-208ENST00000550102 RFX7Q2KHR2 1363 aa21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 UNCXA6NJT0 531 aa21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 HSPA8P11142 646 aaKnown RBP21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 GSTO1P78417 241 aa21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 HOOK2Q96ED9 719 aa21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 CCDC8Q9H0W5 538 aaPredicted RBP21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 IL1RAPL2Q9NP60 686 aa21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 PRDM10Q9NQV6 1147 aa21.11■□□□□ 0.97
CHMP1A-208ENST00000550102 APBB1O00213 710 aa21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 TBC1D9Q6ZT07 1266 aa21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 REM2Q8IYK8 340 aaPredicted RBP21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 FAM163AQ96GL9 167 aaPredicted RBP21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 SNRKQ9NRH2 765 aa21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 USP40Q9NVE5 1235 aa21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 RAI14Q9P0K7 980 aa21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 LRP2BPQ9P2M1 347 aa21.1■□□□□ 0.97
CHMP1A-208ENST00000550102 RAB11FIP3O75154 756 aa21.09■□□□□ 0.97
CHMP1A-208ENST00000550102 LBX1P52954 281 aa21.09■□□□□ 0.97
CHMP1A-208ENST00000550102 CLASRPQ8N2M8 674 aaKnown RBP21.09■□□□□ 0.97
CHMP1A-208ENST00000550102 USP2O75604 605 aaPredicted RBP21.08■□□□□ 0.97
CHMP1A-208ENST00000550102 BTDP43251 543 aa21.08■□□□□ 0.97
CHMP1A-208ENST00000550102 ANKRD13AQ8IZ07 590 aa21.08■□□□□ 0.97
CHMP1A-208ENST00000550102 ZNF384Q8TF68 577 aa21.08■□□□□ 0.97
CHMP1A-208ENST00000550102 FAM151AQ8WW52 585 aa21.08■□□□□ 0.97
CHMP1A-208ENST00000550102 NSUN4Q96CB9 384 aaKnown RBP21.08■□□□□ 0.97
CHMP1A-208ENST00000550102 CLMNQ96JQ2 1002 aa21.08■□□□□ 0.97
CHMP1A-208ENST00000550102 LDHCP07864 332 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 TCP10Q12799 353 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 NFIAQ12857 509 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 SPRYD7Q5W111 196 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 DCAF15Q66K64 600 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 TNS4Q8IZW8 715 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 SLC10A4Q96EP9 437 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 SAGE1Q9NXZ1 904 aa21.07■□□□□ 0.96
CHMP1A-208ENST00000550102 CASP8AP2Q9UKL3 1982 aa21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 MYH7P12883 1935 aa21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 GPR75-ASB3A0A0A6YYF3 556 aa21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 CYP2E1P05181 493 aaPredicted RBP21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 ZAP70P43403 619 aa21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 MKRN3Q13064 507 aaKnown RBP21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 CSRNP1Q96S65 589 aa21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 FAM198AQ9UFP1 575 aa21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 TSKSQ9UJT2 592 aa21.06■□□□□ 0.96
CHMP1A-208ENST00000550102 IGSF3O75054 1194 aa21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 IFIT2P09913 472 aaKnown RBP21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 ZBTB48P10074 688 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 RGS3P49796 1198 aa21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 SREBF2Q12772 1141 aa21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.05■□□□□ 0.965e-25■■□□□ 13.4
CHMP1A-208ENST00000550102 WNK4Q96J92 1243 aa21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 NOL10Q9BSC4 688 aaKnown RBP21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 IDI2Q9BXS1 227 aa21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 CSADQ9Y600 493 aa21.05■□□□□ 0.96
CHMP1A-208ENST00000550102 ENTPD3O75355 529 aa21.04■□□□□ 0.96
CHMP1A-208ENST00000550102 MAP4K4O95819 1239 aaPredicted RBP21.04■□□□□ 0.96
CHMP1A-208ENST00000550102 NAA16Q6N069 864 aaPredicted RBP21.04■□□□□ 0.96
CHMP1A-208ENST00000550102 DOCK1Q14185 1865 aa21.04■□□□□ 0.96
CHMP1A-208ENST00000550102 COL2A1P02458 1487 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-208ENST00000550102 WDHD1O75717 1129 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-208ENST00000550102 VGLL4Q14135 290 aa21.03■□□□□ 0.96
CHMP1A-208ENST00000550102 WRNIP1Q96S55 665 aa21.03■□□□□ 0.96
CHMP1A-208ENST00000550102 LRRCC1Q9C099 1032 aa21.03■□□□□ 0.96
CHMP1A-208ENST00000550102 PIH1D3Q9NQM4 214 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-208ENST00000550102 RHBDL3P58872 404 aa21.02■□□□□ 0.96
CHMP1A-208ENST00000550102 MAP3K9P80192 1104 aa21.02■□□□□ 0.96
CHMP1A-208ENST00000550102 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.02■□□□□ 0.96
CHMP1A-208ENST00000550102 ZNF341Q9BYN7 854 aa21.02■□□□□ 0.96
CHMP1A-208ENST00000550102 BCL11AQ9H165 835 aa21.02■□□□□ 0.96
CHMP1A-208ENST00000550102 ELP3Q9H9T3 547 aa21.02■□□□□ 0.96
CHMP1A-208ENST00000550102 RNF186Q9NXI6 227 aa21.02■□□□□ 0.96
CHMP1A-208ENST00000550102 ATAD5Q96QE3 1844 aa21.01■□□□□ 0.95
CHMP1A-208ENST00000550102 MANSC4A6NHS7 340 aaPredicted RBP21.01■□□□□ 0.95
CHMP1A-208ENST00000550102 TRPA1O75762 1119 aa21.01■□□□□ 0.95
CHMP1A-208ENST00000550102 IDH1O75874 414 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-208ENST00000550102 PICALMQ13492 652 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms