RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 FAM43AQ8N2R8 423 aa16.06■□□□□ 0.16
PTCH1-218ENST00000548945 HDAC5Q9UQL6 1122 aa16.06■□□□□ 0.16
PTCH1-218ENST00000548945 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
PTCH1-218ENST00000548945 TLR2O60603 784 aa16.05■□□□□ 0.16
PTCH1-218ENST00000548945 CAP1Q01518 475 aa16.05■□□□□ 0.16
PTCH1-218ENST00000548945 FAM151AQ8WW52 585 aa16.05■□□□□ 0.16
PTCH1-218ENST00000548945 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
PTCH1-218ENST00000548945 ZNF341Q9BYN7 854 aa16.05■□□□□ 0.16
PTCH1-218ENST00000548945 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
PTCH1-218ENST00000548945 IRF6O14896 467 aa16.04■□□□□ 0.16
PTCH1-218ENST00000548945 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-218ENST00000548945 PPATQ06203 517 aa16.04■□□□□ 0.16
PTCH1-218ENST00000548945 NBPF11Q86T75 865 aa16.04■□□□□ 0.16
PTCH1-218ENST00000548945 TRMT2AQ8IZ69 625 aaKnown RBP16.04■□□□□ 0.16
PTCH1-218ENST00000548945 ZKSCAN4Q969J2 545 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-218ENST00000548945 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
PTCH1-218ENST00000548945 MYH2Q9UKX2 1941 aa16.04■□□□□ 0.16
PTCH1-218ENST00000548945 SALL1Q9NSC2 1324 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 SEMA3EO15041 775 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 GNRH1P01148 92 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 ATP2B3Q16720 1220 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 ZNF333Q96JL9 665 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 CEP126Q9P2H0 1117 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 ZNF112Q9UJU3 913 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 DAGLAQ9Y4D2 1042 aa16.03■□□□□ 0.16
PTCH1-218ENST00000548945 BTBD19C9JJ37 291 aa16.02■□□□□ 0.16
PTCH1-218ENST00000548945 KIF22Q14807 665 aa16.02■□□□□ 0.16
PTCH1-218ENST00000548945 SLC9C1Q4G0N8 1177 aa16.02■□□□□ 0.16
PTCH1-218ENST00000548945 TMEM106CQ9BVX2 250 aa16.02■□□□□ 0.16
PTCH1-218ENST00000548945 DOCK2Q92608 1830 aa16.01■□□□□ 0.15
PTCH1-218ENST00000548945 LDHBP07195 334 aaKnown RBP16.01■□□□□ 0.15
PTCH1-218ENST00000548945 PRDX5P30044 214 aa16.01■□□□□ 0.15
PTCH1-218ENST00000548945 IL15P40933 162 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-218ENST00000548945 PRMT2P55345 433 aa16.01■□□□□ 0.15
PTCH1-218ENST00000548945 LACTBP83111 547 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-218ENST00000548945 CDC42EP5Q6NZY7 148 aa16.01■□□□□ 0.15
PTCH1-218ENST00000548945 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
PTCH1-218ENST00000548945 DENND2AQ9ULE3 1009 aa16.01■□□□□ 0.15
PTCH1-218ENST00000548945 KCNH4Q9UQ05 1017 aa16.01■□□□□ 0.15
PTCH1-218ENST00000548945 PTCH2Q9Y6C5 1203 aa16.01■□□□□ 0.15
PTCH1-218ENST00000548945 INPP5BP32019 993 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 DIXDC1Q155Q3 683 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
PTCH1-218ENST00000548945 MIGA2Q7L4E1 593 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 ANKRD23Q86SG2 305 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 ZGPATQ8N5A5 531 aaKnown RBP16■□□□□ 0.15
PTCH1-218ENST00000548945 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 SIL1Q9H173 461 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 COPRSQ9NQ92 184 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 ZSWIM8A7E2V4 1837 aa16■□□□□ 0.15
PTCH1-218ENST00000548945 PDS5AQ29RF7 1337 aaKnown RBP15.99■□□□□ 0.15
PTCH1-218ENST00000548945 EN2P19622 333 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-218ENST00000548945 C17orf99Q6UX52 265 aa15.99■□□□□ 0.15
PTCH1-218ENST00000548945 FAM198AQ9UFP1 575 aa15.99■□□□□ 0.15
PTCH1-218ENST00000548945 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
PTCH1-218ENST00000548945 TCP10Q12799 353 aa15.98■□□□□ 0.15
PTCH1-218ENST00000548945 NFIAQ12857 509 aa15.98■□□□□ 0.15
PTCH1-218ENST00000548945 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
PTCH1-218ENST00000548945 IDI2Q9BXS1 227 aa15.98■□□□□ 0.15
PTCH1-218ENST00000548945 USP40Q9NVE5 1235 aa15.98■□□□□ 0.15
PTCH1-218ENST00000548945 LRRFIP2Q9Y608 721 aaKnown RBP15.98■□□□□ 0.15
PTCH1-218ENST00000548945 ENTPD3O75355 529 aa15.97■□□□□ 0.15
PTCH1-218ENST00000548945 PHKA1P46020 1223 aa15.97■□□□□ 0.15
PTCH1-218ENST00000548945 SLF2Q8IX21 1173 aa15.97■□□□□ 0.15
PTCH1-218ENST00000548945 FAM163AQ96GL9 167 aaPredicted RBP15.97■□□□□ 0.15
PTCH1-218ENST00000548945 ARHGAP39Q9C0H5 1083 aa15.97■□□□□ 0.15
PTCH1-218ENST00000548945 PTPRFP10586 1907 aa15.97■□□□□ 0.15
PTCH1-218ENST00000548945 ATRNL1Q5VV63 1379 aa15.97■□□□□ 0.15
PTCH1-218ENST00000548945 MGAMO43451 1857 aa15.97■□□□□ 0.15
PTCH1-218ENST00000548945 GAKO14976 1311 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 ADGRA2Q96PE1 1338 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 PDHXO00330 501 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 CXCL11O14625 94 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 MOGSQ13724 837 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 SLC4A8Q2Y0W8 1093 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 CCDC102BQ68D86 513 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 ARHGAP45Q92619 1136 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 RFX7Q2KHR2 1363 aa15.96■□□□□ 0.15
PTCH1-218ENST00000548945 GNAI3P08754 354 aa15.95■□□□□ 0.14
PTCH1-218ENST00000548945 HOXD10P28358 340 aa15.95■□□□□ 0.14
PTCH1-218ENST00000548945 MAP3K10Q02779 954 aa15.95■□□□□ 0.14
PTCH1-218ENST00000548945 SPTY2D1Q68D10 685 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-218ENST00000548945 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
PTCH1-218ENST00000548945 AKAP2Q9Y2D5 859 aa15.95■□□□□ 0.14
PTCH1-218ENST00000548945 DOCK1Q14185 1865 aa15.95■□□□□ 0.14
PTCH1-218ENST00000548945 TRIOBPQ9H2D6 2365 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 PHIPQ8WWQ0 1821 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 PHF20L1A8MW92 1017 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 ADORA1P30542 326 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 PSMC4P43686 418 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 RGS3P49796 1198 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 MTX1Q13505 466 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 RASGRF1Q13972 1273 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 DZIP1Q86YF9 867 aaKnown RBP15.94■□□□□ 0.14
PTCH1-218ENST00000548945 ZFPM1Q8IX07 1006 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 TRIM47Q96LD4 638 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 PARK7Q99497 189 aaKnown RBP15.94■□□□□ 0.14
PTCH1-218ENST00000548945 MEIS3Q99687 375 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 SRRDQ9UH36 339 aa15.94■□□□□ 0.14
PTCH1-218ENST00000548945 CPA4Q9UI42 421 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms