RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 DCAF15Q66K64 600 aa14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 FAM83AQ86UY5 434 aa14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 SSH1Q8WYL5 1049 aa14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 ZNF341Q9BYN7 854 aa14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 SIL1Q9H173 461 aa14.97□□□□□ -0.01
TRAFD1-205ENST00000548277 MAST3O60307 1309 aa14.96□□□□□ -0.01
TRAFD1-205ENST00000548277 BRCA2P51587 3418 aa14.96□□□□□ -0.01
TRAFD1-205ENST00000548277 SLC5A1P13866 664 aa14.96□□□□□ -0.01
TRAFD1-205ENST00000548277 PPIL2Q13356 520 aa14.96□□□□□ -0.01
TRAFD1-205ENST00000548277 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
TRAFD1-205ENST00000548277 HOOK2Q96ED9 719 aa14.96□□□□□ -0.01
TRAFD1-205ENST00000548277 MRIQ9BWK5 157 aa14.96□□□□□ -0.01
TRAFD1-205ENST00000548277 DOCK3Q8IZD9 2030 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 HTTP42858 3142 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 EYA2O00167 538 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 CTGFP29279 349 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 CDC42EP5Q6NZY7 148 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 WDR66Q8TBY9 1149 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 FAM151AQ8WW52 585 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 USP40Q9NVE5 1235 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 DAGLAQ9Y4D2 1042 aa14.95□□□□□ -0.02
TRAFD1-205ENST00000548277 PDHXO00330 501 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 FMNL1O95466 1100 aaPredicted RBP14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 PRDX5P30044 214 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 PSMC4P43686 418 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 RFX5P48382 616 aaPredicted RBP14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 PPATQ06203 517 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 NFIAQ12857 509 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 MTFR1Q15390 333 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 ZFPM1Q8IX07 1006 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 LPIN2Q92539 896 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 SUGT1Q9Y2Z0 365 aa14.94□□□□□ -0.02
TRAFD1-205ENST00000548277 PTPRCP08575 1304 aa14.93□□□□□ -0.02
TRAFD1-205ENST00000548277 FKBP1CQ5VVH2 108 aa14.93□□□□□ -0.02
TRAFD1-205ENST00000548277 C17orf99Q6UX52 265 aa14.93□□□□□ -0.02
TRAFD1-205ENST00000548277 ATG9AQ7Z3C6 839 aa14.93□□□□□ -0.02
TRAFD1-205ENST00000548277 BIN2Q9UBW5 565 aaPredicted RBP14.93□□□□□ -0.02
TRAFD1-205ENST00000548277 DOCK2Q92608 1830 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 H0YGN5 161 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 LDHBP07195 334 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 SLURP2P0DP57 97 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 ATP2B3Q16720 1220 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 RAET1EQ8TD07 263 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 DPF3Q92784 378 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 TRIM47Q96LD4 638 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 CEP126Q9P2H0 1117 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 PA2G4Q9UQ80 394 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
TRAFD1-205ENST00000548277 CYP2C8P10632 490 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 OSBPP22059 807 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 PHKA1P46020 1223 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 FXR1P51114 621 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 ANKRD23Q86SG2 305 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 ZSCAN29Q8IWY8 852 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 CDCA7LQ96GN5 454 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 SMC4Q9NTJ3 1288 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 GNL3LQ9NVN8 582 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 FAM198AQ9UFP1 575 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 SRRDQ9UH36 339 aa14.91□□□□□ -0.02
TRAFD1-205ENST00000548277 E9PSI1 815 aa14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 HOXD10P28358 340 aa14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 GADL1Q6ZQY3 521 aa14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 ZCCHC17Q9NP64 241 aaKnown RBP14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 ZNF112Q9UJU3 913 aa14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 PTPRFP10586 1907 aa14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 MYPNQ86TC9 1320 aa14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
TRAFD1-205ENST00000548277 GNRH1P01148 92 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 ADORA1P30542 326 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 GRK4P32298 578 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 PRMT2P55345 433 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 MOGSQ13724 837 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 KCNH4Q9UQ05 1017 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 ZHX2Q9Y6X8 837 aa14.89□□□□□ -0.03
TRAFD1-205ENST00000548277 RPAP1Q9BWH6 1393 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 PHIPQ8WWQ0 1821 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 RGS3P49796 1198 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 TIMM10P62072 90 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 PICALMQ13492 652 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 GPAT2Q6NUI2 795 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 RNF208Q9H0X6 261 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 DENND2AQ9ULE3 1009 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 NOB1Q9ULX3 412 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 GABRQQ9UN88 632 aa14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 LRRFIP2Q9Y608 721 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-205ENST00000548277 CCL5P13501 91 aa14.87□□□□□ -0.03
TRAFD1-205ENST00000548277 PRKCZQ05513 592 aa14.87□□□□□ -0.03
TRAFD1-205ENST00000548277 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
TRAFD1-205ENST00000548277 CCDC84Q86UT8 332 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-205ENST00000548277 SHISA4Q96DD7 197 aa14.87□□□□□ -0.03
TRAFD1-205ENST00000548277 PICK1Q9NRD5 415 aa14.87□□□□□ -0.03
TRAFD1-205ENST00000548277 DOCK1Q14185 1865 aa14.86□□□□□ -0.03
TRAFD1-205ENST00000548277 DDTLA6NHG4 134 aaPredicted RBP14.86□□□□□ -0.03
TRAFD1-205ENST00000548277 CIAO1O76071 339 aa14.86□□□□□ -0.03
TRAFD1-205ENST00000548277 FCGRTP55899 365 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms