RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 MCAMP43121 646 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
CCDC38-205ENST00000546947 LBX1P52954 281 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 CACNB3P54284 484 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 TTC39AQ5SRH9 613 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 DBNDD2Q9BQY9 259 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 TMEM39BQ9GZU3 492 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 EXOC6BQ9Y2D4 811 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 OTOFQ9HC10 1997 aa18.15■□□□□ 0.5
CCDC38-205ENST00000546947 LAMB1P07942 1786 aa18.14■□□□□ 0.5
CCDC38-205ENST00000546947 AK9Q5TCS8 1911 aa18.14■□□□□ 0.49
CCDC38-205ENST00000546947 USP2O75604 605 aaPredicted RBP18.14■□□□□ 0.49
CCDC38-205ENST00000546947 CDC42EP5Q6NZY7 148 aa18.14■□□□□ 0.49
CCDC38-205ENST00000546947 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
CCDC38-205ENST00000546947 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
CCDC38-205ENST00000546947 FZD1Q9UP38 647 aa18.14■□□□□ 0.49
CCDC38-205ENST00000546947 GAKO14976 1311 aa18.14■□□□□ 0.49
CCDC38-205ENST00000546947 RPAP1Q9BWH6 1393 aaPredicted RBP18.14■□□□□ 0.49
CCDC38-205ENST00000546947 MAST2Q6P0Q8 1798 aa18.13■□□□□ 0.49
CCDC38-205ENST00000546947 PI16Q6UXB8 463 aa18.13■□□□□ 0.49
CCDC38-205ENST00000546947 EAF2Q96CJ1 260 aaPredicted RBP18.13■□□□□ 0.49
CCDC38-205ENST00000546947 HOOK2Q96ED9 719 aa18.13■□□□□ 0.49
CCDC38-205ENST00000546947 CSRNP1Q96S65 589 aa18.13■□□□□ 0.49
CCDC38-205ENST00000546947 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
CCDC38-205ENST00000546947 SIRT2Q8IXJ6 389 aa18.12■□□□□ 0.49
CCDC38-205ENST00000546947 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
CCDC38-205ENST00000546947 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
CCDC38-205ENST00000546947 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
CCDC38-205ENST00000546947 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
CCDC38-205ENST00000546947 USP40Q9NVE5 1235 aa18.12■□□□□ 0.49
CCDC38-205ENST00000546947 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
CCDC38-205ENST00000546947 SAGE1Q9NXZ1 904 aa18.12■□□□□ 0.49
CCDC38-205ENST00000546947 DBNLQ9UJU6 430 aaKnown RBP18.12■□□□□ 0.49
CCDC38-205ENST00000546947 IGSF3O75054 1194 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 GSTO1P78417 241 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 MECOMQ03112 1051 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 CDAN1Q8IWY9 1227 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 RHPN1Q8TCX5 695 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 KIF1BPQ96EK5 621 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 SLC10A4Q96EP9 437 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 MROH7-TTC4A0A0A0MT08 1334 aa18.11■□□□□ 0.49
CCDC38-205ENST00000546947 MYO5AQ9Y4I1 1855 aaKnown RBP18.11■□□□□ 0.49
CCDC38-205ENST00000546947 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
CCDC38-205ENST00000546947 LDHCP07864 332 aa18.1■□□□□ 0.49
CCDC38-205ENST00000546947 SPRYD7Q5W111 196 aa18.1■□□□□ 0.49
CCDC38-205ENST00000546947 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
CCDC38-205ENST00000546947 NSUN4Q96CB9 384 aaKnown RBP18.1■□□□□ 0.49
CCDC38-205ENST00000546947 IDI2Q9BXS1 227 aa18.1■□□□□ 0.49
CCDC38-205ENST00000546947 TLR7Q9NYK1 1049 aaKnown RBP18.1■□□□□ 0.49
CCDC38-205ENST00000546947 LRP2BPQ9P2M1 347 aa18.1■□□□□ 0.49
CCDC38-205ENST00000546947 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
CCDC38-205ENST00000546947 BTDP43251 543 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 TM4SF4P48230 202 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 SREBF2Q12772 1141 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 DCAF15Q66K64 600 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 AACSQ86V21 672 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 TNS4Q8IZW8 715 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 CLASRPQ8N2M8 674 aaKnown RBP18.09■□□□□ 0.49
CCDC38-205ENST00000546947 WNK4Q96J92 1243 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 CLMNQ96JQ2 1002 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 RNF186Q9NXI6 227 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 RAI14Q9P0K7 980 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 DOCK2Q92608 1830 aa18.09■□□□□ 0.49
CCDC38-205ENST00000546947 GPR75-ASB3A0A0A6YYF3 556 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 NPM3O75607 178 aaKnown RBP18.08■□□□□ 0.48
CCDC38-205ENST00000546947 MAP4K4O95819 1239 aaPredicted RBP18.08■□□□□ 0.48
CCDC38-205ENST00000546947 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
CCDC38-205ENST00000546947 TCP10Q12799 353 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 NFIAQ12857 509 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 MKRN3Q13064 507 aaKnown RBP18.08■□□□□ 0.48
CCDC38-205ENST00000546947 IFFO2Q5TF58 517 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.08■□□□□ 0.48
CCDC38-205ENST00000546947 ZNF384Q8TF68 577 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 IL1RAPL2Q9NP60 686 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 SNRKQ9NRH2 765 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 FAM198AQ9UFP1 575 aa18.08■□□□□ 0.48
CCDC38-205ENST00000546947 RFX7Q2KHR2 1363 aa18.07■□□□□ 0.48
CCDC38-205ENST00000546947 MANSC4A6NHS7 340 aaPredicted RBP18.07■□□□□ 0.48
CCDC38-205ENST00000546947 ENTPD3O75355 529 aa18.07■□□□□ 0.48
CCDC38-205ENST00000546947 CYP2E1P05181 493 aaPredicted RBP18.07■□□□□ 0.48
CCDC38-205ENST00000546947 ZAP70P43403 619 aa18.07■□□□□ 0.48
CCDC38-205ENST00000546947 MAP3K9P80192 1104 aa18.07■□□□□ 0.48
CCDC38-205ENST00000546947 CSADQ9Y600 493 aa18.07■□□□□ 0.48
CCDC38-205ENST00000546947 CASP8AP2Q9UKL3 1982 aa18.06■□□□□ 0.48
CCDC38-205ENST00000546947 TRPA1O75762 1119 aa18.06■□□□□ 0.48
CCDC38-205ENST00000546947 INHBEP58166 350 aa18.06■□□□□ 0.48
CCDC38-205ENST00000546947 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.06■□□□□ 0.48
CCDC38-205ENST00000546947 ZNF341Q9BYN7 854 aa18.06■□□□□ 0.48
CCDC38-205ENST00000546947 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
CCDC38-205ENST00000546947 APBB1O00213 710 aa18.05■□□□□ 0.48
CCDC38-205ENST00000546947 WDHD1O75717 1129 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-205ENST00000546947 RGS3P49796 1198 aa18.05■□□□□ 0.48
CCDC38-205ENST00000546947 RHBDL3P58872 404 aa18.05■□□□□ 0.48
CCDC38-205ENST00000546947 VGLL4Q14135 290 aa18.05■□□□□ 0.48
CCDC38-205ENST00000546947 NAA16Q6N069 864 aaPredicted RBP18.05■□□□□ 0.48
CCDC38-205ENST00000546947 ELP3Q9H9T3 547 aa18.05■□□□□ 0.48
CCDC38-205ENST00000546947 IFIT2P09913 472 aaKnown RBP18.04■□□□□ 0.48
CCDC38-205ENST00000546947 OPTNQ96CV9 577 aa18.04■□□□□ 0.48
CCDC38-205ENST00000546947 WRNIP1Q96S55 665 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms