RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PRKG1Q13976 671 aa19.51■□□□□ 0.71
DDX54-204ENST00000546898 LDLRAD1Q5T700 205 aa19.51■□□□□ 0.71
DDX54-204ENST00000546898 ERICH6Q7L0X2 663 aa19.51■□□□□ 0.71
DDX54-204ENST00000546898 REM2Q8IYK8 340 aaPredicted RBP19.51■□□□□ 0.71
DDX54-204ENST00000546898 TEPSINQ96N21 525 aa19.51■□□□□ 0.71
DDX54-204ENST00000546898 MYO5AQ9Y4I1 1855 aaKnown RBP19.51■□□□□ 0.71
DDX54-204ENST00000546898 DOCK2Q92608 1830 aa19.51■□□□□ 0.71
DDX54-204ENST00000546898 IREB2P48200 963 aaKnown RBP19.5■□□□□ 0.71
DDX54-204ENST00000546898 CACNB3P54284 484 aa19.5■□□□□ 0.71
DDX54-204ENST00000546898 SIRT2Q8IXJ6 389 aa19.5■□□□□ 0.71
DDX54-204ENST00000546898 EAF2Q96CJ1 260 aaPredicted RBP19.5■□□□□ 0.71
DDX54-204ENST00000546898 TMEM39BQ9GZU3 492 aa19.5■□□□□ 0.71
DDX54-204ENST00000546898 DBNLQ9UJU6 430 aaKnown RBP19.5■□□□□ 0.71
DDX54-204ENST00000546898 IGSF3O75054 1194 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
DDX54-204ENST00000546898 KIF23Q02241 960 aaPredicted RBP19.49■□□□□ 0.71
DDX54-204ENST00000546898 PI16Q6UXB8 463 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 RHPN1Q8TCX5 695 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 HOOK2Q96ED9 719 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 KIF1BPQ96EK5 621 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 FAM163AQ96GL9 167 aaPredicted RBP19.49■□□□□ 0.71
DDX54-204ENST00000546898 ZIC5Q96T25 663 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 PRDM10Q9NQV6 1147 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 MROH7-TTC4A0A0A0MT08 1334 aa19.49■□□□□ 0.71
DDX54-204ENST00000546898 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
DDX54-204ENST00000546898 HSPA8P11142 646 aaKnown RBP19.48■□□□□ 0.71
DDX54-204ENST00000546898 GSTO1P78417 241 aa19.48■□□□□ 0.71
DDX54-204ENST00000546898 CDC42EP5Q6NZY7 148 aa19.48■□□□□ 0.71
DDX54-204ENST00000546898 CCDC8Q9H0W5 538 aaPredicted RBP19.48■□□□□ 0.71
DDX54-204ENST00000546898 RFX7Q2KHR2 1363 aa19.47■□□□□ 0.71
DDX54-204ENST00000546898 USP2O75604 605 aaPredicted RBP19.47■□□□□ 0.71
DDX54-204ENST00000546898 MECOMQ03112 1051 aa19.47■□□□□ 0.71
DDX54-204ENST00000546898 ANKRD13AQ8IZ07 590 aa19.47■□□□□ 0.71
DDX54-204ENST00000546898 FAM151AQ8WW52 585 aa19.47■□□□□ 0.71
DDX54-204ENST00000546898 TLR7Q9NYK1 1049 aaKnown RBP19.47■□□□□ 0.71
DDX54-204ENST00000546898 FZD1Q9UP38 647 aa19.47■□□□□ 0.71
DDX54-204ENST00000546898 LDHCP07864 332 aa19.46■□□□□ 0.71
DDX54-204ENST00000546898 AACSQ86V21 672 aa19.46■□□□□ 0.71
DDX54-204ENST00000546898 CDAN1Q8IWY9 1227 aa19.46■□□□□ 0.71
DDX54-204ENST00000546898 CLASRPQ8N2M8 674 aaKnown RBP19.46■□□□□ 0.71
DDX54-204ENST00000546898 NSUN4Q96CB9 384 aaKnown RBP19.46■□□□□ 0.71
DDX54-204ENST00000546898 USP40Q9NVE5 1235 aa19.46■□□□□ 0.71
DDX54-204ENST00000546898 SAGE1Q9NXZ1 904 aa19.46■□□□□ 0.71
DDX54-204ENST00000546898 BTDP43251 543 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 LBX1P52954 281 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 TBC1D9Q6ZT07 1266 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 CSRNP1Q96S65 589 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 IDI2Q9BXS1 227 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 RAI14Q9P0K7 980 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 LRP2BPQ9P2M1 347 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 CDK5RAP2Q96SN8 1893 aa19.45■□□□□ 0.7
DDX54-204ENST00000546898 FOCADQ5VW36 1801 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 GPR75-ASB3A0A0A6YYF3 556 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 MAP4K4O95819 1239 aaPredicted RBP19.44■□□□□ 0.7
DDX54-204ENST00000546898 ZBTB48P10074 688 aaPredicted RBP19.44■□□□□ 0.7
DDX54-204ENST00000546898 NFIAQ12857 509 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 SPRYD7Q5W111 196 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 DCAF15Q66K64 600 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 ZNF384Q8TF68 577 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 SLC10A4Q96EP9 437 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 IL1RAPL2Q9NP60 686 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
DDX54-204ENST00000546898 ENTPD3O75355 529 aa19.43■□□□□ 0.7
DDX54-204ENST00000546898 CYP2E1P05181 493 aaPredicted RBP19.43■□□□□ 0.7
DDX54-204ENST00000546898 SREBF2Q12772 1141 aa19.43■□□□□ 0.7
DDX54-204ENST00000546898 CLMNQ96JQ2 1002 aa19.43■□□□□ 0.7
DDX54-204ENST00000546898 FAM198AQ9UFP1 575 aa19.43■□□□□ 0.7
DDX54-204ENST00000546898 ZAP70P43403 619 aa19.42■□□□□ 0.7
DDX54-204ENST00000546898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.42■□□□□ 0.7
DDX54-204ENST00000546898 WNK4Q96J92 1243 aa19.42■□□□□ 0.7
DDX54-204ENST00000546898 CASP8AP2Q9UKL3 1982 aa19.41■□□□□ 0.7
DDX54-204ENST00000546898 APBB1O00213 710 aa19.41■□□□□ 0.7
DDX54-204ENST00000546898 IFIT2P09913 472 aaKnown RBP19.41■□□□□ 0.7
DDX54-204ENST00000546898 TM4SF4P48230 202 aa19.41■□□□□ 0.7
DDX54-204ENST00000546898 RGS3P49796 1198 aa19.41■□□□□ 0.7
DDX54-204ENST00000546898 MAP3K9P80192 1104 aa19.41■□□□□ 0.7
DDX54-204ENST00000546898 TCP10Q12799 353 aa19.41■□□□□ 0.7
DDX54-204ENST00000546898 CSADQ9Y600 493 aa19.41■□□□□ 0.7
DDX54-204ENST00000546898 COL2A1P02458 1487 aaPredicted RBP19.41■□□□□ 0.7
DDX54-204ENST00000546898 MANSC4A6NHS7 340 aaPredicted RBP19.4■□□□□ 0.7
DDX54-204ENST00000546898 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
DDX54-204ENST00000546898 WDHD1O75717 1129 aaPredicted RBP19.4■□□□□ 0.7
DDX54-204ENST00000546898 RHBDL3P58872 404 aa19.4■□□□□ 0.7
DDX54-204ENST00000546898 NAA16Q6N069 864 aaPredicted RBP19.4■□□□□ 0.7
DDX54-204ENST00000546898 TMED8Q6PL24 325 aaPredicted RBP19.4■□□□□ 0.7
DDX54-204ENST00000546898 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.4■□□□□ 0.7
DDX54-204ENST00000546898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.4■□□□□ 0.7
DDX54-204ENST00000546898 NOL10Q9BSC4 688 aaKnown RBP19.4■□□□□ 0.7
DDX54-204ENST00000546898 ZNF341Q9BYN7 854 aa19.4■□□□□ 0.7
DDX54-204ENST00000546898 RNF186Q9NXI6 227 aa19.4■□□□□ 0.7
DDX54-204ENST00000546898 INHBEP58166 350 aa19.39■□□□□ 0.69
DDX54-204ENST00000546898 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
DDX54-204ENST00000546898 VGLL4Q14135 290 aa19.39■□□□□ 0.69
DDX54-204ENST00000546898 WRNIP1Q96S55 665 aa19.39■□□□□ 0.69
DDX54-204ENST00000546898 LRRCC1Q9C099 1032 aa19.39■□□□□ 0.69
DDX54-204ENST00000546898 TSKSQ9UJT2 592 aa19.39■□□□□ 0.69
DDX54-204ENST00000546898 MYH7P12883 1935 aa19.39■□□□□ 0.69
DDX54-204ENST00000546898 BAG3O95817 575 aa19.38■□□□□ 0.69
DDX54-204ENST00000546898 ATRNL1Q5VV63 1379 aa19.38■□□□□ 0.69
DDX54-204ENST00000546898 ELP3Q9H9T3 547 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms