RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 PPATQ06203 517 aa28.26■■■□□ 2.11
CDKN3-207ENST00000543789 SLFN5Q08AF3 891 aa28.26■■■□□ 2.11
CDKN3-207ENST00000543789 RPAP1Q9BWH6 1393 aaPredicted RBP28.25■■■□□ 2.11
CDKN3-207ENST00000543789 OTOFQ9HC10 1997 aa28.25■■■□□ 2.11
CDKN3-207ENST00000543789 LACTBP83111 547 aaPredicted RBP28.25■■■□□ 2.11
CDKN3-207ENST00000543789 ALDH1L2Q3SY69 923 aa28.25■■■□□ 2.11
CDKN3-207ENST00000543789 ATG9AQ7Z3C6 839 aa28.25■■■□□ 2.11
CDKN3-207ENST00000543789 ARAP2Q8WZ64 1704 aa28.25■■■□□ 2.11
CDKN3-207ENST00000543789 MKI67P46013 3256 aaKnown RBP28.25■■■□□ 2.11
CDKN3-207ENST00000543789 CENPFP49454 3210 aa28.25■■■□□ 2.11
CDKN3-207ENST00000543789 INPP5BP32019 993 aa28.24■■■□□ 2.11
CDKN3-207ENST00000543789 SLC4A8Q2Y0W8 1093 aa28.24■■■□□ 2.11
CDKN3-207ENST00000543789 ARHGAP39Q9C0H5 1083 aa28.24■■■□□ 2.11
CDKN3-207ENST00000543789 DAGLAQ9Y4D2 1042 aa28.24■■■□□ 2.11
CDKN3-207ENST00000543789 GNRH1P01148 92 aa28.23■■■□□ 2.11
CDKN3-207ENST00000543789 TCP10Q12799 353 aa28.23■■■□□ 2.11
CDKN3-207ENST00000543789 CDC42EP5Q6NZY7 148 aa28.23■■■□□ 2.11
CDKN3-207ENST00000543789 GNL3LQ9NVN8 582 aaKnown RBP28.23■■■□□ 2.11
CDKN3-207ENST00000543789 CEP126Q9P2H0 1117 aa28.23■■■□□ 2.11
CDKN3-207ENST00000543789 FBXO3Q9UK99 471 aa28.23■■■□□ 2.11
CDKN3-207ENST00000543789 DIXDC1Q155Q3 683 aa28.22■■■□□ 2.11
CDKN3-207ENST00000543789 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.22■■■□□ 2.11
CDKN3-207ENST00000543789 SIL1Q9H173 461 aa28.22■■■□□ 2.11
CDKN3-207ENST00000543789 SMC4Q9NTJ3 1288 aa28.22■■■□□ 2.11
CDKN3-207ENST00000543789 ZNF112Q9UJU3 913 aa28.22■■■□□ 2.11
CDKN3-207ENST00000543789 CIAO1O76071 339 aa28.21■■■□□ 2.11
CDKN3-207ENST00000543789 UBTFL1P0CB47 393 aaPredicted RBP28.21■■■□□ 2.11
CDKN3-207ENST00000543789 HABP4Q5JVS0 413 aaKnown RBP28.21■■■□□ 2.11
CDKN3-207ENST00000543789 LDHBP07195 334 aaKnown RBP28.2■■■□□ 2.1
CDKN3-207ENST00000543789 PRDX5P30044 214 aa28.2■■■□□ 2.1
CDKN3-207ENST00000543789 ATP2B3Q16720 1220 aa28.2■■■□□ 2.1
CDKN3-207ENST00000543789 C17orf99Q6UX52 265 aa28.2■■■□□ 2.1
CDKN3-207ENST00000543789 USP40Q9NVE5 1235 aa28.2■■■□□ 2.1
CDKN3-207ENST00000543789 KIAA0100Q14667 2235 aaKnown RBP28.2■■■□□ 2.1
CDKN3-207ENST00000543789 MYCP01106 439 aaPredicted RBP28.19■■■□□ 2.1
CDKN3-207ENST00000543789 PRMT2P55345 433 aa28.19■■■□□ 2.1
CDKN3-207ENST00000543789 NFIAQ12857 509 aa28.19■■■□□ 2.1
CDKN3-207ENST00000543789 ANKRD23Q86SG2 305 aa28.19■■■□□ 2.1
CDKN3-207ENST00000543789 SH3TC2Q8TF17 1288 aa28.19■■■□□ 2.1
CDKN3-207ENST00000543789 KCNH4Q9UQ05 1017 aa28.19■■■□□ 2.1
CDKN3-207ENST00000543789 CDCA7LQ96GN5 454 aa28.18■■■□□ 2.1
CDKN3-207ENST00000543789 FAM198AQ9UFP1 575 aa28.18■■■□□ 2.1
CDKN3-207ENST00000543789 CPA4Q9UI42 421 aa28.18■■■□□ 2.1
CDKN3-207ENST00000543789 DENND2AQ9ULE3 1009 aa28.18■■■□□ 2.1
CDKN3-207ENST00000543789 BRCA2P51587 3418 aa28.17■■■□□ 2.1
CDKN3-207ENST00000543789 PDHXO00330 501 aa28.17■■■□□ 2.1
CDKN3-207ENST00000543789 HDAC5Q9UQL6 1122 aa28.17■■■□□ 2.1
CDKN3-207ENST00000543789 SEMA3EO15041 775 aa28.16■■■□□ 2.1
CDKN3-207ENST00000543789 IL15P40933 162 aaPredicted RBP28.16■■■□□ 2.1
CDKN3-207ENST00000543789 SALL1Q9NSC2 1324 aa28.16■■■□□ 2.1
CDKN3-207ENST00000543789 ECM2O94769 699 aaPredicted RBP28.15■■■□□ 2.1
CDKN3-207ENST00000543789 NOL9Q5SY16 702 aaKnown RBP28.15■■■□□ 2.1
CDKN3-207ENST00000543789 NOB1Q9ULX3 412 aaKnown RBP28.15■■■□□ 2.1
CDKN3-207ENST00000543789 HOXD10P28358 340 aa28.14■■■□□ 2.1
CDKN3-207ENST00000543789 PSMC4P43686 418 aa28.14■■■□□ 2.1
CDKN3-207ENST00000543789 PHKA1P46020 1223 aa28.14■■■□□ 2.1
CDKN3-207ENST00000543789 ZFPM1Q8IX07 1006 aa28.14■■■□□ 2.1
CDKN3-207ENST00000543789 CXCL11O14625 94 aa28.13■■■□□ 2.09
CDKN3-207ENST00000543789 MOGSQ13724 837 aa28.13■■■□□ 2.09
CDKN3-207ENST00000543789 TRMT2AQ8IZ69 625 aaKnown RBP28.13■■■□□ 2.09
CDKN3-207ENST00000543789 ZGPATQ8N5A5 531 aaKnown RBP28.13■■■□□ 2.09
CDKN3-207ENST00000543789 SRRDQ9UH36 339 aa28.13■■■□□ 2.09
CDKN3-207ENST00000543789 PA2G4Q9UQ80 394 aaKnown RBP28.13■■■□□ 2.09
CDKN3-207ENST00000543789 LRRFIP2Q9Y608 721 aaKnown RBP28.13■■■□□ 2.09
CDKN3-207ENST00000543789 CTGFP29279 349 aa28.12■■■□□ 2.09
CDKN3-207ENST00000543789 TRIM47Q96LD4 638 aa28.12■■■□□ 2.09
CDKN3-207ENST00000543789 ZBTB22O15209 634 aa28.11■■■□□ 2.09
CDKN3-207ENST00000543789 FMNL1O95466 1100 aaPredicted RBP28.11■■■□□ 2.09
CDKN3-207ENST00000543789 CT47B1P0C2W7 299 aaPredicted RBP28.11■■■□□ 2.09
CDKN3-207ENST00000543789 CCDC102BQ68D86 513 aa28.11■■■□□ 2.09
CDKN3-207ENST00000543789 API5Q9BZZ5 524 aaKnown RBP28.11■■■□□ 2.09
CDKN3-207ENST00000543789 COPRSQ9NQ92 184 aa28.11■■■□□ 2.09
CDKN3-207ENST00000543789 IDI2Q9BXS1 227 aa28.1■■■□□ 2.09
CDKN3-207ENST00000543789 ADGRA2Q96PE1 1338 aa28.1■■■□□ 2.09
CDKN3-207ENST00000543789 RBBP6Q7Z6E9 1792 aaKnown RBP28.09■■■□□ 2.09
CDKN3-207ENST00000543789 PHF20L1A8MW92 1017 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 ENTPD3O75355 529 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 OSBPP22059 807 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 ADORA1P30542 326 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 RGS3P49796 1198 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 GPAT2Q6NUI2 795 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 RAET1EQ8TD07 263 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 PARK7Q99497 189 aaKnown RBP28.09■■■□□ 2.09
CDKN3-207ENST00000543789 PICK1Q9NRD5 415 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 ZHX2Q9Y6X8 837 aa28.09■■■□□ 2.09
CDKN3-207ENST00000543789 SLF2Q8IX21 1173 aa28.08■■■□□ 2.09
CDKN3-207ENST00000543789 TIMM10P62072 90 aa28.07■■■□□ 2.08
CDKN3-207ENST00000543789 MTFR1Q15390 333 aa28.07■■■□□ 2.08
CDKN3-207ENST00000543789 FASTKD5Q7L8L6 764 aaKnown RBP28.07■■■□□ 2.08
CDKN3-207ENST00000543789 DZIP1Q86YF9 867 aaKnown RBP28.07■■■□□ 2.08
CDKN3-207ENST00000543789 ZSCAN29Q8IWY8 852 aaPredicted RBP28.07■■■□□ 2.08
CDKN3-207ENST00000543789 SCYL3Q8IZE3 742 aa28.07■■■□□ 2.08
CDKN3-207ENST00000543789 ABCF2Q9UG63 623 aa28.07■■■□□ 2.08
CDKN3-207ENST00000543789 GAKO14976 1311 aa28.07■■■□□ 2.08
CDKN3-207ENST00000543789 CYP2C8P10632 490 aa28.06■■■□□ 2.08
CDKN3-207ENST00000543789 GRK4P32298 578 aa28.06■■■□□ 2.08
CDKN3-207ENST00000543789 FAM163AQ96GL9 167 aaPredicted RBP28.06■■■□□ 2.08
CDKN3-207ENST00000543789 MEIS3Q99687 375 aa28.06■■■□□ 2.08
CDKN3-207ENST00000543789 MYPNQ86TC9 1320 aa28.06■■■□□ 2.08
CDKN3-207ENST00000543789 BCRP11274 1271 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms