RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
TNFRSF1A-215ENST00000543359 TBC1D8O95759 1140 aa16.2■□□□□ 0.18
TNFRSF1A-215ENST00000543359 SREBF2Q12772 1141 aa16.2■□□□□ 0.18
TNFRSF1A-215ENST00000543359 FAM163AQ96GL9 167 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-215ENST00000543359 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
TNFRSF1A-215ENST00000543359 FAM198AQ9UFP1 575 aa16.2■□□□□ 0.18
TNFRSF1A-215ENST00000543359 RPAP1Q9BWH6 1393 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-215ENST00000543359 MANSC4A6NHS7 340 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ARID4AP29374 1257 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 MAP3K9P80192 1104 aa16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 PI16Q6UXB8 463 aa16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ZFPM1Q8IX07 1006 aa16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 FAM151AQ8WW52 585 aa16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
TNFRSF1A-215ENST00000543359 TESPA1A2RU30 521 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 IGF2BP3O00425 579 aaKnown RBP eCLIP16.18■□□□□ 0.182e-6■■■□□ 18.3
TNFRSF1A-215ENST00000543359 SURF6O75683 361 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 INHBEP58166 350 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 VGLL4Q14135 290 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 SPATA5Q8NB90 893 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 MS4A4AQ96JQ5 239 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 PTPN18Q99952 460 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ELP3Q9H9T3 547 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 USP40Q9NVE5 1235 aa16.18■□□□□ 0.18
TNFRSF1A-215ENST00000543359 RFX7Q2KHR2 1363 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 MCAMP43121 646 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 DGKZQ13574 1117 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 TNNI3KQ59H18 835 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 OPTNQ96CV9 577 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ABCF2Q9UG63 623 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 FPGT-TNNI3KV9GXZ4 949 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 CENPFP49454 3210 aa16.17■□□□□ 0.18
TNFRSF1A-215ENST00000543359 GPR25O00155 361 aa16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 MECOMQ03112 1051 aa16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 SPTY2D1Q68D10 685 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ZNF296Q8WUU4 475 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 NSUN4Q96CB9 384 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 DBNDD2Q9BQY9 259 aa16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 IDI2Q9BXS1 227 aa16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 SNCAIPQ9Y6H5 919 aa16.16■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ATRNL1Q5VV63 1379 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 GPR75-ASB3A0A0A6YYF3 556 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 WDHD1O75717 1129 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 TCP10Q12799 353 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ZKSCAN4Q969J2 545 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 EAF2Q96CJ1 260 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 ZNF112Q9UJU3 913 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 MROH7-TTC4A0A0A0MT08 1334 aa16.15■□□□□ 0.18
TNFRSF1A-215ENST00000543359 TNRC18O15417 2968 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 SPDYE5A6NIY4 337 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ALDH1A1P00352 501 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 MS4A1P11836 297 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 RGS3P49796 1198 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 RHBDL3P58872 404 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ERICH6Q7L0X2 663 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 SIRT2Q8IXJ6 389 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ZNF512BQ96KM6 892 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 WRNIP1Q96S55 665 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 DDX4Q9NQI0 724 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ZBTB40Q9NUA8 1239 aa16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 DBNLQ9UJU6 430 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ENTPD3O75355 529 aa16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 INPP5BP32019 993 aa16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CTU1Q7Z7A3 348 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 BRI3BPQ8WY22 251 aa16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 HOOK2Q96ED9 719 aa16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ZNF341Q9BYN7 854 aa16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 TLR7Q9NYK1 1049 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-215ENST00000543359 AK9Q5TCS8 1911 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CYP2E1P05181 493 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 BTDP43251 543 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 ERO1BQ86YB8 467 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 EXOC6BQ9Y2D4 811 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 COG6Q9Y2V7 657 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CSADQ9Y600 493 aa16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 MYO5AQ9Y4I1 1855 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-215ENST00000543359 PHF20L1A8MW92 1017 aa16.11■□□□□ 0.17
TNFRSF1A-215ENST00000543359 NPM3O75607 178 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-215ENST00000543359 SLURP2P0DP57 97 aa16.11■□□□□ 0.17
TNFRSF1A-215ENST00000543359 GTF2A2P52657 109 aa16.11■□□□□ 0.17
TNFRSF1A-215ENST00000543359 CRHR2Q13324 411 aa16.11■□□□□ 0.17
TNFRSF1A-215ENST00000543359 C20orf194Q5TEA3 1177 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms