RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	PPIL2	Q13356	520 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	KIF22	Q14807	665 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	ZGPAT	Q8N5A5	531 aa	Known RBP	13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	ARHGAP45	Q92619	1136 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	ARMC5	Q96C12	935 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	SIL1	Q9H173	461 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	COPRS	Q9NQ92	184 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	USP40	Q9NVE5	1235 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	SNCAIP	Q9Y6H5	919 aa		13.23	□□□□□ -0.29
ARAP1-215	ENST00000542264	HTT	P42858	3142 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	IRF6	O14896	467 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	IPO8	O15397	1037 aa	Known RBP	13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	TLR2	O60603	784 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	GNRH1	P01148	92 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	GNAI3	P08754	354 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	CDC42EP5	Q6NZY7	148 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	MIGA2	Q7L4E1	593 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	SLF2	Q8IX21	1173 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	FAM43A	Q8N2R8	423 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	TMEM106C	Q9BVX2	250 aa		13.22	□□□□□ -0.29
ARAP1-215	ENST00000542264	SALL1	Q9NSC2	1324 aa		13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	TCP10	Q12799	353 aa		13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	ZNF112	Q9UJU3	913 aa		13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	AKAP2	Q9Y2D5	859 aa		13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	DAGLA	Q9Y4D2	1042 aa		13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	LRRFIP2	Q9Y608	721 aa	Known RBP	13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	CENPF	P49454	3210 aa		13.21	□□□□□ -0.29
ARAP1-215	ENST00000542264	BTBD19	C9JJ37	291 aa		13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	CCER2	I3L3R5	266 aa		13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	PRDX5	P30044	214 aa		13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	RARS	P54136	660 aa	Known RBP	13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	PRMT2	P55345	433 aa		13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	DIXDC1	Q155Q3	683 aa		13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	MKI67	P46013	3256 aa	Known RBP	13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.2	□□□□□ -0.3
ARAP1-215	ENST00000542264	PHKA1	P46020	1223 aa		13.19	□□□□□ -0.3
ARAP1-215	ENST00000542264	TIMM10	P62072	90 aa		13.19	□□□□□ -0.3
ARAP1-215	ENST00000542264	SLC9C1	Q4G0N8	1177 aa		13.19	□□□□□ -0.3
ARAP1-215	ENST00000542264	CCDC102B	Q68D86	513 aa		13.19	□□□□□ -0.3
ARAP1-215	ENST00000542264	GCC1	Q96CN9	775 aa		13.19	□□□□□ -0.3
ARAP1-215	ENST00000542264	FAM163A	Q96GL9	167 aa	Predicted RBP	13.19	□□□□□ -0.3
ARAP1-215	ENST00000542264	POTEF	A5A3E0	1075 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	CXCL11	O14625	94 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	SRGAP3	O43295	1099 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	ENTPD3	O75355	529 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	HOXD10	P28358	340 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	INPP5B	P32019	993 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	LACTB	P83111	547 aa	Predicted RBP	13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	NFIA	Q12857	509 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	MVP	Q14764	893 aa	Known RBP	13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	NOL9	Q5SY16	702 aa	Known RBP	13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	ANKRD23	Q86SG2	305 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	MEIS3	Q99687	375 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	IDI2	Q9BXS1	227 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	FAM198A	Q9UFP1	575 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	KCNH4	Q9UQ05	1017 aa		13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	PA2G4	Q9UQ80	394 aa	Known RBP	13.18	□□□□□ -0.3
ARAP1-215	ENST00000542264	PDS5A	Q29RF7	1337 aa	Known RBP	13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	MTX1	Q13505	466 aa		13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	C17orf99	Q6UX52	265 aa		13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	DZIP1	Q86YF9	867 aa	Known RBP	13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	ZNF333	Q96JL9	665 aa		13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	PICK1	Q9NRD5	415 aa		13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	ABCF2	Q9UG63	623 aa		13.17	□□□□□ -0.3
ARAP1-215	ENST00000542264	KIAA0100	Q14667	2235 aa	Known RBP	13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	PDHX	O00330	501 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	MAP4K4	O95819	1239 aa	Predicted RBP	13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	EN2	P19622	333 aa	Predicted RBP	13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	ADORA1	P30542	326 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	CAP1	Q01518	475 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	MAP3K10	Q02779	954 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	SLC4A8	Q2Y0W8	1093 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	GORAB	Q5T7V8	394 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	FASTKD5	Q7L8L6	764 aa	Known RBP	13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	XAGE2	Q96GT9	111 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	PTCH2	Q9Y6C5	1203 aa		13.16	□□□□□ -0.3
ARAP1-215	ENST00000542264	GAK	O14976	1311 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264		A0A1B0GUL7	405 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	PHF20L1	A8MW92	1017 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	GNAI2	P04899	355 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	LDHC	P07864	332 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	RGS3	P49796	1198 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	GSTO1	P78417	241 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	TFCP2	Q12800	502 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	RASGRF1	Q13972	1273 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	ERICH6	Q7L0X2	663 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	ZFPM1	Q8IX07	1006 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	NEUROD6	Q96NK8	337 aa		13.15	□□□□□ -0.3
ARAP1-215	ENST00000542264	ECM29	Q5VYK3	1845 aa		13.14	□□□□□ -0.31
ARAP1-215	ENST00000542264	CTNND1	O60716	968 aa	Known RBP	13.14	□□□□□ -0.31
ARAP1-215	ENST00000542264	NPM3	O75607	178 aa	Known RBP	13.14	□□□□□ -0.31
ARAP1-215	ENST00000542264	FMNL1	O95466	1100 aa	Predicted RBP	13.14	□□□□□ -0.31
ARAP1-215	ENST00000542264	PSMC4	P43686	418 aa		13.14	□□□□□ -0.31
ARAP1-215	ENST00000542264	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
ARAP1-215	ENST00000542264	ATF7IP	Q6VMQ6	1270 aa		13.14	□□□□□ -0.31
ARAP1-215	ENST00000542264	SCYL3	Q8IZE3	742 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms