RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NBPF11Q86T75 865 aa14.99□□□□□ -0.01
CBX3P4-202ENST00000540428 ZNF333Q96JL9 665 aa14.99□□□□□ -0.01
CBX3P4-202ENST00000540428 SMC4Q9NTJ3 1288 aa14.99□□□□□ -0.01
CBX3P4-202ENST00000540428 HDAC5Q9UQL6 1122 aa14.99□□□□□ -0.01
CBX3P4-202ENST00000540428 HTTP42858 3142 aa14.99□□□□□ -0.01
CBX3P4-202ENST00000540428 GNRH1P01148 92 aa14.98□□□□□ -0.01
CBX3P4-202ENST00000540428 UBTFL1P0CB47 393 aaPredicted RBP14.98□□□□□ -0.01
CBX3P4-202ENST00000540428 ZKSCAN4Q969J2 545 aaPredicted RBP14.98□□□□□ -0.01
CBX3P4-202ENST00000540428 TMEM106CQ9BVX2 250 aa14.98□□□□□ -0.01
CBX3P4-202ENST00000540428 GNL3LQ9NVN8 582 aaKnown RBP14.98□□□□□ -0.01
CBX3P4-202ENST00000540428 DAGLAQ9Y4D2 1042 aa14.98□□□□□ -0.01
CBX3P4-202ENST00000540428 SALL1Q9NSC2 1324 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 BTBD19C9JJ37 291 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 SEMA3EO15041 775 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 KIF22Q14807 665 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 ATP2B3Q16720 1220 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 SLC9C1Q4G0N8 1177 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 TRMT2AQ8IZ69 625 aaKnown RBP14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 CEP126Q9P2H0 1117 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 ZNF112Q9UJU3 913 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 PTCH2Q9Y6C5 1203 aa14.97□□□□□ -0.01
CBX3P4-202ENST00000540428 RBBP6Q7Z6E9 1792 aaKnown RBP14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 LDHBP07195 334 aaKnown RBP14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 PRDX5P30044 214 aa14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 IL15P40933 162 aaPredicted RBP14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 PRMT2P55345 433 aa14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 LACTBP83111 547 aaPredicted RBP14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 NOL9Q5SY16 702 aaKnown RBP14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 CDC42EP5Q6NZY7 148 aa14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 MIGA2Q7L4E1 593 aa14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 API5Q9BZZ5 524 aaKnown RBP14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 DENND2AQ9ULE3 1009 aa14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 KCNH4Q9UQ05 1017 aa14.96□□□□□ -0.01
CBX3P4-202ENST00000540428 EN2P19622 333 aaPredicted RBP14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 INPP5BP32019 993 aa14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 DIXDC1Q155Q3 683 aa14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 ANKRD23Q86SG2 305 aa14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 ZGPATQ8N5A5 531 aaKnown RBP14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 SIL1Q9H173 461 aa14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 COPRSQ9NQ92 184 aa14.95□□□□□ -0.02
CBX3P4-202ENST00000540428 TCP10Q12799 353 aa14.94□□□□□ -0.02
CBX3P4-202ENST00000540428 NFIAQ12857 509 aa14.94□□□□□ -0.02
CBX3P4-202ENST00000540428 C17orf99Q6UX52 265 aa14.94□□□□□ -0.02
CBX3P4-202ENST00000540428 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.94□□□□□ -0.02
CBX3P4-202ENST00000540428 USP40Q9NVE5 1235 aa14.94□□□□□ -0.02
CBX3P4-202ENST00000540428 FAM198AQ9UFP1 575 aa14.94□□□□□ -0.02
CBX3P4-202ENST00000540428 NOB1Q9ULX3 412 aaKnown RBP14.94□□□□□ -0.02
CBX3P4-202ENST00000540428 IDI2Q9BXS1 227 aa14.93□□□□□ -0.02
CBX3P4-202ENST00000540428 LRRFIP2Q9Y608 721 aaKnown RBP14.93□□□□□ -0.02
CBX3P4-202ENST00000540428 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 KIAA0100Q14667 2235 aaKnown RBP14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 PDHXO00330 501 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 ENTPD3O75355 529 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 PHKA1P46020 1223 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 SLC4A8Q2Y0W8 1093 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 CCDC102BQ68D86 513 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 GAKO14976 1311 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
CBX3P4-202ENST00000540428 CXCL11O14625 94 aa14.91□□□□□ -0.02
CBX3P4-202ENST00000540428 HOXD10P28358 340 aa14.91□□□□□ -0.02
CBX3P4-202ENST00000540428 MOGSQ13724 837 aa14.91□□□□□ -0.02
CBX3P4-202ENST00000540428 SLF2Q8IX21 1173 aa14.91□□□□□ -0.02
CBX3P4-202ENST00000540428 ARHGAP45Q92619 1136 aa14.91□□□□□ -0.02
CBX3P4-202ENST00000540428 FAM163AQ96GL9 167 aaPredicted RBP14.91□□□□□ -0.02
CBX3P4-202ENST00000540428 PA2G4Q9UQ80 394 aaKnown RBP14.91□□□□□ -0.02
CBX3P4-202ENST00000540428 RFX7Q2KHR2 1363 aa14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 ATRNL1Q5VV63 1379 aa14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 PSMC4P43686 418 aa14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 MAP3K10Q02779 954 aa14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 HABP4Q5JVS0 413 aaKnown RBP14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 SH3TC2Q8TF17 1288 aa14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 PARK7Q99497 189 aaKnown RBP14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 SRRDQ9UH36 339 aa14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 CPA4Q9UI42 421 aa14.9□□□□□ -0.02
CBX3P4-202ENST00000540428 MKI67P46013 3256 aaKnown RBP14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 PHF20L1A8MW92 1017 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 GNAI3P08754 354 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 ADORA1P30542 326 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 RGS3P49796 1198 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 MTX1Q13505 466 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 RASGRF1Q13972 1273 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 SPTY2D1Q68D10 685 aaPredicted RBP14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 DZIP1Q86YF9 867 aaKnown RBP14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 ZFPM1Q8IX07 1006 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 SCYL3Q8IZE3 742 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 MEIS3Q99687 375 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 AKAP2Q9Y2D5 859 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 MYH13Q9UKX3 1938 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 CENPFP49454 3210 aa14.89□□□□□ -0.03
CBX3P4-202ENST00000540428 CTGFP29279 349 aa14.88□□□□□ -0.03
CBX3P4-202ENST00000540428 RARSP54136 660 aaKnown RBP14.88□□□□□ -0.03
CBX3P4-202ENST00000540428 MVPQ14764 893 aaKnown RBP14.88□□□□□ -0.03
CBX3P4-202ENST00000540428 GPAT2Q6NUI2 795 aa14.88□□□□□ -0.03
CBX3P4-202ENST00000540428 FASTKD5Q7L8L6 764 aaKnown RBP14.88□□□□□ -0.03
CBX3P4-202ENST00000540428 TRIM47Q96LD4 638 aa14.88□□□□□ -0.03
CBX3P4-202ENST00000540428 PICK1Q9NRD5 415 aa14.88□□□□□ -0.03
CBX3P4-202ENST00000540428 A0A0G2JLL6 359 aaPredicted RBP14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 A0A1B0GUL7 405 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms