RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 CNKSR2Q8WXI2 1034 aa20.74■□□□□ 0.91
DDB1-215ENST00000539712 NEUROD6Q96NK8 337 aa20.74■□□□□ 0.91
DDB1-215ENST00000539712 LAMB1P07942 1786 aa20.74■□□□□ 0.91
DDB1-215ENST00000539712 MANSC4A6NHS7 340 aaPredicted RBP20.73■□□□□ 0.91
DDB1-215ENST00000539712 IGF2BP3O00425 579 aaKnown RBP eCLIP20.73■□□□□ 0.91
DDB1-215ENST00000539712 MAP3K9P80192 1104 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 VGLL4Q14135 290 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 PI16Q6UXB8 463 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 ELP3Q9H9T3 547 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 TMOD2Q9NZR1 351 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 HMG20BQ9P0W2 317 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 FAM198AQ9UFP1 575 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 GAKO14976 1311 aa20.73■□□□□ 0.91
DDB1-215ENST00000539712 INHBEP58166 350 aa20.72■□□□□ 0.91
DDB1-215ENST00000539712 NOM1Q5C9Z4 860 aaKnown RBP20.72■□□□□ 0.91
DDB1-215ENST00000539712 IFNL1Q8IU54 200 aa20.72■□□□□ 0.91
DDB1-215ENST00000539712 FAM151AQ8WW52 585 aa20.72■□□□□ 0.91
DDB1-215ENST00000539712 FAM163AQ96GL9 167 aaPredicted RBP20.72■□□□□ 0.91
DDB1-215ENST00000539712 PTPN18Q99952 460 aa20.72■□□□□ 0.91
DDB1-215ENST00000539712 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
DDB1-215ENST00000539712 HTTP42858 3142 aa20.72■□□□□ 0.91
DDB1-215ENST00000539712 RPAP1Q9BWH6 1393 aaPredicted RBP20.72■□□□□ 0.91
DDB1-215ENST00000539712 TESPA1A2RU30 521 aaPredicted RBP20.71■□□□□ 0.91
DDB1-215ENST00000539712 ARID4AP29374 1257 aaPredicted RBP20.71■□□□□ 0.91
DDB1-215ENST00000539712 ZFPM1Q8IX07 1006 aa20.71■□□□□ 0.91
DDB1-215ENST00000539712 ZGPATQ8N5A5 531 aaKnown RBP20.71■□□□□ 0.91
DDB1-215ENST00000539712 ZNF296Q8WUU4 475 aaPredicted RBP20.71■□□□□ 0.91
DDB1-215ENST00000539712 OPTNQ96CV9 577 aa20.71■□□□□ 0.91
DDB1-215ENST00000539712 MS4A4AQ96JQ5 239 aa20.71■□□□□ 0.91
DDB1-215ENST00000539712 GPR108Q9NPR9 543 aa20.71■□□□□ 0.91
DDB1-215ENST00000539712 USP40Q9NVE5 1235 aa20.71■□□□□ 0.91
DDB1-215ENST00000539712 ABCF2Q9UG63 623 aa20.71■□□□□ 0.91
DDB1-215ENST00000539712 GPR25O00155 361 aa20.7■□□□□ 0.9
DDB1-215ENST00000539712 SURF6O75683 361 aaKnown RBP20.7■□□□□ 0.9
DDB1-215ENST00000539712 TCP10Q12799 353 aa20.7■□□□□ 0.9
DDB1-215ENST00000539712 CEP85Q6P2H3 762 aa20.7■□□□□ 0.9
DDB1-215ENST00000539712 SPATA5Q8NB90 893 aa20.7■□□□□ 0.9
DDB1-215ENST00000539712 MYH2Q9UKX2 1941 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 MCAMP43121 646 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 MECOMQ03112 1051 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 TNNI3KQ59H18 835 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 TBC1D9Q6ZT07 1266 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 MIGA2Q7L4E1 593 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 SNCAIPQ9Y6H5 919 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 FPGT-TNNI3KV9GXZ4 949 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 RFX7Q2KHR2 1363 aa20.69■□□□□ 0.9
DDB1-215ENST00000539712 CTU1Q7Z7A3 348 aaKnown RBP20.68■□□□□ 0.9
DDB1-215ENST00000539712 ZKSCAN4Q969J2 545 aaPredicted RBP20.68■□□□□ 0.9
DDB1-215ENST00000539712 DBNDD2Q9BQY9 259 aa20.68■□□□□ 0.9
DDB1-215ENST00000539712 IDI2Q9BXS1 227 aa20.68■□□□□ 0.9
DDB1-215ENST00000539712 CCDC85CA6NKD9 419 aa20.67■□□□□ 0.9
DDB1-215ENST00000539712 WDHD1O75717 1129 aaPredicted RBP20.67■□□□□ 0.9
DDB1-215ENST00000539712 ALDH1A1P00352 501 aa20.67■□□□□ 0.9
DDB1-215ENST00000539712 GORABQ5T7V8 394 aa20.67■□□□□ 0.9
DDB1-215ENST00000539712 SPTY2D1Q68D10 685 aaPredicted RBP20.67■□□□□ 0.9
DDB1-215ENST00000539712 SH3BP5LQ7L8J4 393 aa20.67■□□□□ 0.9
DDB1-215ENST00000539712 DZIP1Q86YF9 867 aaKnown RBP20.67■□□□□ 0.9
DDB1-215ENST00000539712 WRNIP1Q96S55 665 aa20.67■□□□□ 0.9
DDB1-215ENST00000539712 ZNF112Q9UJU3 913 aa20.67■□□□□ 0.9
DDB1-215ENST00000539712 GPR75-ASB3A0A0A6YYF3 556 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 SPDYE5A6NIY4 337 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 RHBDL3P58872 404 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 ERICH6Q7L0X2 663 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 BRI3BPQ8WY22 251 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 NSUN4Q96CB9 384 aaKnown RBP20.66■□□□□ 0.9
DDB1-215ENST00000539712 HOOK2Q96ED9 719 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 CSADQ9Y600 493 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 ATRNL1Q5VV63 1379 aa20.66■□□□□ 0.9
DDB1-215ENST00000539712 MROH7-TTC4A0A0A0MT08 1334 aa20.65■□□□□ 0.9
DDB1-215ENST00000539712 INPP5BP32019 993 aa20.65■□□□□ 0.9
DDB1-215ENST00000539712 RGS3P49796 1198 aa20.65■□□□□ 0.9
DDB1-215ENST00000539712 DCAF15Q66K64 600 aa20.65■□□□□ 0.9
DDB1-215ENST00000539712 OTUD5Q96G74 571 aa20.65■□□□□ 0.9
DDB1-215ENST00000539712 ZNF341Q9BYN7 854 aa20.65■□□□□ 0.9
DDB1-215ENST00000539712 DDX4Q9NQI0 724 aaKnown RBP20.65■□□□□ 0.9
DDB1-215ENST00000539712 DBNLQ9UJU6 430 aaKnown RBP20.65■□□□□ 0.9
DDB1-215ENST00000539712 ENTPD3O75355 529 aa20.64■□□□□ 0.89
DDB1-215ENST00000539712 UQCRFS1P1P0C7P4 283 aa20.64■□□□□ 0.89
DDB1-215ENST00000539712 BTDP43251 543 aa20.64■□□□□ 0.89
DDB1-215ENST00000539712 OS9Q13438 667 aaPredicted RBP20.64■□□□□ 0.89
DDB1-215ENST00000539712 EAF2Q96CJ1 260 aaPredicted RBP20.64■□□□□ 0.89
DDB1-215ENST00000539712 SNRKQ9NRH2 765 aa20.64■□□□□ 0.89
DDB1-215ENST00000539712 TLR7Q9NYK1 1049 aaKnown RBP20.64■□□□□ 0.89
DDB1-215ENST00000539712 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
DDB1-215ENST00000539712 CENPFP49454 3210 aa20.64■□□□□ 0.89
DDB1-215ENST00000539712 FKTNO75072 461 aa20.63■□□□□ 0.89
DDB1-215ENST00000539712 MAP3K10Q02779 954 aa20.63■□□□□ 0.89
DDB1-215ENST00000539712 CRHR2Q13324 411 aa20.63■□□□□ 0.89
DDB1-215ENST00000539712 ERO1BQ86YB8 467 aa20.63■□□□□ 0.89
DDB1-215ENST00000539712 SLF2Q8IX21 1173 aa20.63■□□□□ 0.89
DDB1-215ENST00000539712 ZNF512BQ96KM6 892 aaPredicted RBP20.63■□□□□ 0.89
DDB1-215ENST00000539712 ZBTB40Q9NUA8 1239 aa20.63■□□□□ 0.89
DDB1-215ENST00000539712 PHF20L1A8MW92 1017 aa20.62■□□□□ 0.89
DDB1-215ENST00000539712 IRF6O14896 467 aa20.62■□□□□ 0.89
DDB1-215ENST00000539712 SLURP2P0DP57 97 aa20.62■□□□□ 0.89
DDB1-215ENST00000539712 MS4A1P11836 297 aa20.62■□□□□ 0.89
DDB1-215ENST00000539712 GTF2A2P52657 109 aa20.62■□□□□ 0.89
DDB1-215ENST00000539712 SIRT2Q8IXJ6 389 aa20.62■□□□□ 0.89
DDB1-215ENST00000539712 COG6Q9Y2V7 657 aa20.62■□□□□ 0.89
DDB1-215ENST00000539712 CCL15-CCL14A0A0B4J2E2 113 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms