RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 FAM155AB1AL88 458 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-205ENST00000536255 UBE2Q2LH0YL09 131 aa16.51■□□□□ 0.23
RPAIN-205ENST00000536255 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
RPAIN-205ENST00000536255 TNNI2P48788 182 aa16.51■□□□□ 0.23
RPAIN-205ENST00000536255 CACNB3P54284 484 aa16.51■□□□□ 0.23
RPAIN-205ENST00000536255 PRKG1Q13976 671 aa16.51■□□□□ 0.23
RPAIN-205ENST00000536255 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
RPAIN-205ENST00000536255 ARMC9Q7Z3E5 817 aa16.51■□□□□ 0.23
RPAIN-205ENST00000536255 WBP1LQ9NX94 342 aa16.51■□□□□ 0.23
RPAIN-205ENST00000536255 SLC10A3P09131 477 aa16.5■□□□□ 0.23
RPAIN-205ENST00000536255 NBPF12Q5TAG4 269 aaPredicted RBP16.5■□□□□ 0.23
RPAIN-205ENST00000536255 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
RPAIN-205ENST00000536255 FKBP1CQ5VVH2 108 aa16.5■□□□□ 0.23
RPAIN-205ENST00000536255 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
RPAIN-205ENST00000536255 SLF2Q8IX21 1173 aa16.5■□□□□ 0.23
RPAIN-205ENST00000536255 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
RPAIN-205ENST00000536255 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.5■□□□□ 0.23
RPAIN-205ENST00000536255 TMEM39BQ9GZU3 492 aa16.5■□□□□ 0.23
RPAIN-205ENST00000536255 GAKO14976 1311 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 PPP1R12BO60237 982 aaPredicted RBP16.49■□□□□ 0.23
RPAIN-205ENST00000536255 IGSF3O75054 1194 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 IGHDP01880 384 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 MECOMQ03112 1051 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 CDC42EP5Q6NZY7 148 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 FAM83AQ86UY5 434 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 RASAL3Q86YV0 1011 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 SNRKQ9NRH2 765 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 ANGEL1Q9UNK9 670 aaKnown RBP16.49■□□□□ 0.23
RPAIN-205ENST00000536255 FZD1Q9UP38 647 aa16.49■□□□□ 0.23
RPAIN-205ENST00000536255 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
RPAIN-205ENST00000536255 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
RPAIN-205ENST00000536255 CDAN1Q8IWY9 1227 aa16.48■□□□□ 0.23
RPAIN-205ENST00000536255 FAM163AQ96GL9 167 aaPredicted RBP16.48■□□□□ 0.23
RPAIN-205ENST00000536255 MROH7-TTC4A0A0A0MT08 1334 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 FOXN1O15353 648 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 ATP5JP18859 108 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 GSTO1P78417 241 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 ZNF384Q8TF68 577 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 NSUN4Q96CB9 384 aaKnown RBP16.47■□□□□ 0.23
RPAIN-205ENST00000536255 ZIC5Q96T25 663 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 ECHDC1Q9NTX5 307 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 USP40Q9NVE5 1235 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
RPAIN-205ENST00000536255 RPAP1Q9BWH6 1393 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-205ENST00000536255 CYP2E1P05181 493 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-205ENST00000536255 ZAP70P43403 619 aa16.46■□□□□ 0.23
RPAIN-205ENST00000536255 TTF1Q15361 905 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-205ENST00000536255 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
RPAIN-205ENST00000536255 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 AKAP11Q9UKA4 1901 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 ERC2O15083 957 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 USP2O75604 605 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-205ENST00000536255 LDHCP07864 332 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 BTDP43251 543 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
RPAIN-205ENST00000536255 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-205ENST00000536255 NFIAQ12857 509 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 FAM151AQ8WW52 585 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
RPAIN-205ENST00000536255 RFX7Q2KHR2 1363 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 GPR75-ASB3A0A0A6YYF3 556 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 CTCFP49711 727 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-205ENST00000536255 NUCB1Q02818 461 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 TCP10Q12799 353 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 TMED8Q6PL24 325 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-205ENST00000536255 CHD1LQ86WJ1 897 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 HOOK2Q96ED9 719 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 DNAJC2Q99543 621 aaKnown RBP16.44■□□□□ 0.22
RPAIN-205ENST00000536255 IDI2Q9BXS1 227 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 BOLA2Q9H3K6 86 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
RPAIN-205ENST00000536255 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 MX1P20591 662 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 CLMNQ96JQ2 1002 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 HAUS7Q99871 368 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 LNPKQ9C0E8 428 aa16.43■□□□□ 0.22
RPAIN-205ENST00000536255 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
RPAIN-205ENST00000536255 CA12O43570 354 aa16.42■□□□□ 0.22
RPAIN-205ENST00000536255 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-205ENST00000536255 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
RPAIN-205ENST00000536255 GLRX3O76003 335 aaKnown RBP16.42■□□□□ 0.22
RPAIN-205ENST00000536255 RGS3P49796 1198 aa16.42■□□□□ 0.22
RPAIN-205ENST00000536255 RHBDL3P58872 404 aa16.42■□□□□ 0.22
RPAIN-205ENST00000536255 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-205ENST00000536255 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-205ENST00000536255 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
RPAIN-205ENST00000536255 CSRNP1Q96S65 589 aa16.42■□□□□ 0.22
RPAIN-205ENST00000536255 PAG1Q9NWQ8 432 aa16.42■□□□□ 0.22
RPAIN-205ENST00000536255 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
RPAIN-205ENST00000536255 GOLIM4O00461 696 aa16.41■□□□□ 0.22
RPAIN-205ENST00000536255 ENTPD3O75355 529 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms