RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PRMT2P55345 433 aa16.2■□□□□ 0.18
TNFRSF1A-207ENST00000535958 LACTBP83111 547 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-207ENST00000535958 PPATQ06203 517 aa16.2■□□□□ 0.18
TNFRSF1A-207ENST00000535958 APOBEC3HQ6NTF7 200 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-207ENST00000535958 AK9Q5TCS8 1911 aa16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ZNF316A6NFI3 1004 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 E9PSI1 815 aa16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 EYA2O00167 538 aa16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 MIGA2Q7L4E1 593 aa16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 SH3TC2Q8TF17 1288 aa16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 FAM151AQ8WW52 585 aa16.19■□□□□ 0.18
TNFRSF1A-207ENST00000535958 HOXD10P28358 340 aa16.18■□□□□ 0.18
TNFRSF1A-207ENST00000535958 CAP1Q01518 475 aa16.18■□□□□ 0.18
TNFRSF1A-207ENST00000535958 TCP10Q12799 353 aa16.18■□□□□ 0.18
TNFRSF1A-207ENST00000535958 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-207ENST00000535958 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 FGFR2P21802 821 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 INPP5BP32019 993 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ANKRD23Q86SG2 305 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 RAET1EQ8TD07 263 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 SSH1Q8WYL5 1049 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ARHGAP39Q9C0H5 1083 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 SIL1Q9H173 461 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 SMC4Q9NTJ3 1288 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 CPA4Q9UI42 421 aa16.17■□□□□ 0.18
TNFRSF1A-207ENST00000535958 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 FMNL1O95466 1100 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 DIXDC1Q155Q3 683 aa16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 PARK7Q99497 189 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 HDAC5Q9UQL6 1122 aa16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 DAGLAQ9Y4D2 1042 aa16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 BRCA2P51587 3418 aa16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
TNFRSF1A-207ENST00000535958 PDHXO00330 501 aa16.15■□□□□ 0.18
TNFRSF1A-207ENST00000535958 PSMC4P43686 418 aa16.15■□□□□ 0.18
TNFRSF1A-207ENST00000535958 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-207ENST00000535958 BIN2Q9UBW5 565 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-207ENST00000535958 FBXO3Q9UK99 471 aa16.15■□□□□ 0.18
TNFRSF1A-207ENST00000535958 DENND2AQ9ULE3 1009 aa16.15■□□□□ 0.18
TNFRSF1A-207ENST00000535958 PRDX5P30044 214 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 ALDH1L2Q3SY69 923 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 CDC42EP5Q6NZY7 148 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 C17orf99Q6UX52 265 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 NKX2-3Q8TAU0 364 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 PICK1Q9NRD5 415 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 USP40Q9NVE5 1235 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SRRDQ9UH36 339 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 MYPNQ86TC9 1320 aa16.14■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SEMA3EO15041 775 aa16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 CIAO1O76071 339 aa16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 UBXN2AP68543 259 aa16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 NFIAQ12857 509 aa16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 NOL9Q5SY16 702 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 DZIP1Q86YF9 867 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 KCNH4Q9UQ05 1017 aa16.13■□□□□ 0.17
TNFRSF1A-207ENST00000535958 DOCK2Q92608 1830 aa16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 GRK4P32298 578 aa16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 IL15P40933 162 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 RFX5P48382 616 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 FCGRTP55899 365 aa16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 TRIM47Q96LD4 638 aa16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 ZNF112Q9UJU3 913 aa16.12■□□□□ 0.17
TNFRSF1A-207ENST00000535958 CXCL11O14625 94 aa16.11■□□□□ 0.17
TNFRSF1A-207ENST00000535958 OSBPP22059 807 aa16.11■□□□□ 0.17
TNFRSF1A-207ENST00000535958 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-207ENST00000535958 ATG9AQ7Z3C6 839 aa16.11■□□□□ 0.17
TNFRSF1A-207ENST00000535958 DPF3Q92784 378 aa16.11■□□□□ 0.17
TNFRSF1A-207ENST00000535958 LRRFIP2Q9Y608 721 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SALL1Q9NSC2 1324 aa16.11■□□□□ 0.17
TNFRSF1A-207ENST00000535958 RGS3P49796 1198 aa16.1■□□□□ 0.17
TNFRSF1A-207ENST00000535958 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
TNFRSF1A-207ENST00000535958 HTATIP2Q9BUP3 242 aa16.1■□□□□ 0.17
TNFRSF1A-207ENST00000535958 FAM198AQ9UFP1 575 aa16.1■□□□□ 0.17
TNFRSF1A-207ENST00000535958 ABCF2Q9UG63 623 aa16.1■□□□□ 0.17
TNFRSF1A-207ENST00000535958 COLQQ9Y215 455 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-207ENST00000535958 ENTPD3O75355 529 aa16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 PHKA1P46020 1223 aa16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SLFN5Q08AF3 891 aa16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 MTFR1Q15390 333 aa16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SLAIN1Q8ND83 568 aa16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 SMCR8Q8TEV9 937 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 API5Q9BZZ5 524 aaKnown RBP16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
TNFRSF1A-207ENST00000535958 MYH2Q9UKX2 1941 aa16.08■□□□□ 0.16
TNFRSF1A-207ENST00000535958 H0YGN5 161 aa16.08■□□□□ 0.16
TNFRSF1A-207ENST00000535958 CYP2C8P10632 490 aa16.08■□□□□ 0.16
TNFRSF1A-207ENST00000535958 CCL5P13501 91 aa16.08■□□□□ 0.16
TNFRSF1A-207ENST00000535958 FXR1P51114 621 aaKnown RBP eCLIP16.08■□□□□ 0.16
TNFRSF1A-207ENST00000535958 PICALMQ13492 652 aa16.08■□□□□ 0.16
TNFRSF1A-207ENST00000535958 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms