RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GRIK5Q16478 980 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 RAET1EQ8TD07 263 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 RNF208Q9H0X6 261 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 BIN2Q9UBW5 565 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 TTF2Q9UNY4 1162 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 CSADQ9Y600 493 aa12.59□□□□□ -0.39
CLSTN3-203ENST00000534830 EVI5O60447 810 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 FARP2O94887 1054 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 GJB1P08034 283 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 CCL5P13501 91 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 GRK4P32298 578 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 BCAMP50895 628 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 HDLBPQ00341 1268 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 TNFAIP1Q13829 316 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 PUM3Q15397 648 aaKnown RBP12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 UBE2Q1Q7Z7E8 422 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 ZNF70Q9UC06 446 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 STAP2Q9UGK3 403 aa12.58□□□□□ -0.4
CLSTN3-203ENST00000534830 ZBTB22O15209 634 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 CIAO1O76071 339 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 UBTFL1P0CB47 393 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 CETPP11597 493 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 HOXD10P28358 340 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 PSMC4P43686 418 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 CRKP46108 304 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 VPS37DQ86XT2 251 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 DZIP1LQ8IYY4 767 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 DEFB123Q8N688 67 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 TBC1D22AQ8WUA7 517 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 LPIN2Q92539 896 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 TEPSINQ96N21 525 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 SRRDQ9UH36 339 aa12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
CLSTN3-203ENST00000534830 BTBD19C9JJ37 291 aa12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 UBXN2AP68543 259 aa12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 TRIM47Q96LD4 638 aa12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 MEIS3Q99687 375 aa12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 TDRD3Q9H7E2 651 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 SUGT1Q9Y2Z0 365 aa12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 LRRFIP2Q9Y608 721 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-203ENST00000534830 TCP10L2B9ZVM9 353 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 OSBPP22059 807 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 CTGFP29279 349 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 CHAF1AQ13111 956 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 Q7L0L9 218 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 U2AF1L4Q8WU68 220 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 COPRSQ9NQ92 184 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 MYPNQ86TC9 1320 aa12.55□□□□□ -0.4
CLSTN3-203ENST00000534830 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 BCAR3O75815 825 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 SLC5A1P13866 664 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 TRIM27P14373 513 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 SNAPC2Q13487 334 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 MTX1Q13505 466 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 APOBEC3HQ6NTF7 200 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 MIER1Q8N108 512 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 ZDHHC15Q96MV8 337 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 STXBP5LQ9Y2K9 1186 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 UNC80Q8N2C7 3258 aa12.54□□□□□ -0.4
CLSTN3-203ENST00000534830 IRF6O14896 467 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 IL15P40933 162 aaPredicted RBP12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 TNNI2P48788 182 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 HHIPL2Q6UWX4 724 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 C17orf99Q6UX52 265 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 TEKT1Q969V4 418 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 SIL1Q9H173 461 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 UNC93B1Q9H1C4 597 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 CEP126Q9P2H0 1117 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
CLSTN3-203ENST00000534830 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 SGPL1O95470 568 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 TFRCP02786 760 aaKnown RBP12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 GNAI3P08754 354 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 ATP2B3Q16720 1220 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 FKBP1CQ5VVH2 108 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 WDR66Q8TBY9 1149 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 SNCAIPQ9Y6H5 919 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 MAST3O60307 1309 aa12.52□□□□□ -0.41
CLSTN3-203ENST00000534830 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms