RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 ERICH6Q7L0X2 663 aa15□□□□□ -0.01
SF3B2-213ENST00000533421 ABCF2Q9UG63 623 aa15□□□□□ -0.01
SF3B2-213ENST00000533421 NOP58Q9Y2X3 529 aaKnown RBP15□□□□□ -0.01
SF3B2-213ENST00000533421 RPAP1Q9BWH6 1393 aaPredicted RBP14.99□□□□□ -0.01
SF3B2-213ENST00000533421 MANSC4A6NHS7 340 aaPredicted RBP14.99□□□□□ -0.01
SF3B2-213ENST00000533421 IGSF3O75054 1194 aa14.99□□□□□ -0.01
SF3B2-213ENST00000533421 LDHCP07864 332 aa14.99□□□□□ -0.01
SF3B2-213ENST00000533421 ARID4AP29374 1257 aaPredicted RBP14.99□□□□□ -0.01
SF3B2-213ENST00000533421 GSTO1P78417 241 aa14.99□□□□□ -0.01
SF3B2-213ENST00000533421 TTC39AQ5SRH9 613 aa14.99□□□□□ -0.01
SF3B2-213ENST00000533421 DCAF15Q66K64 600 aa14.99□□□□□ -0.01
SF3B2-213ENST00000533421 APOBEC3HQ6NTF7 200 aaKnown RBP14.99□□□□□ -0.01
SF3B2-213ENST00000533421 RPAP2Q8IXW5 612 aaPredicted RBP14.99□□□□□ -0.01
SF3B2-213ENST00000533421 CSRNP1Q96S65 589 aa14.99□□□□□ -0.01
SF3B2-213ENST00000533421 DAGLAQ9Y4D2 1042 aa14.99□□□□□ -0.01
SF3B2-213ENST00000533421 ALDH1A1P00352 501 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 SPRYD7Q5W111 196 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 SPATA5Q8NB90 893 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 ZIC5Q96T25 663 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 TMEM39BQ9GZU3 492 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 IL1RAPL2Q9NP60 686 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 CSADQ9Y600 493 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
SF3B2-213ENST00000533421 USP2O75604 605 aaPredicted RBP14.97□□□□□ -0.01
SF3B2-213ENST00000533421 TRPA1O75762 1119 aa14.97□□□□□ -0.01
SF3B2-213ENST00000533421 MAP4K4O95819 1239 aaPredicted RBP14.97□□□□□ -0.01
SF3B2-213ENST00000533421 DIXDC1Q155Q3 683 aa14.97□□□□□ -0.01
SF3B2-213ENST00000533421 OTUD7BQ6GQQ9 843 aa14.97□□□□□ -0.01
SF3B2-213ENST00000533421 FAM151AQ8WW52 585 aa14.97□□□□□ -0.01
SF3B2-213ENST00000533421 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
SF3B2-213ENST00000533421 RNF186Q9NXI6 227 aa14.97□□□□□ -0.01
SF3B2-213ENST00000533421 TLR7Q9NYK1 1049 aaKnown RBP14.97□□□□□ -0.01
SF3B2-213ENST00000533421 SSC5DA1L4H1 1573 aa14.97□□□□□ -0.01
SF3B2-213ENST00000533421 AOX1Q06278 1338 aa14.96□□□□□ -0.01
SF3B2-213ENST00000533421 SMARCA5O60264 1052 aaPredicted RBP14.96□□□□□ -0.01
SF3B2-213ENST00000533421 TM4SF4P48230 202 aa14.96□□□□□ -0.01
SF3B2-213ENST00000533421 FAM163AQ96GL9 167 aaPredicted RBP14.96□□□□□ -0.01
SF3B2-213ENST00000533421 TEPSINQ96N21 525 aa14.96□□□□□ -0.01
SF3B2-213ENST00000533421 USP40Q9NVE5 1235 aa14.96□□□□□ -0.01
SF3B2-213ENST00000533421 HMG20BQ9P0W2 317 aa14.96□□□□□ -0.01
SF3B2-213ENST00000533421 LRP2BPQ9P2M1 347 aa14.96□□□□□ -0.01
SF3B2-213ENST00000533421 TSKSQ9UJT2 592 aa14.96□□□□□ -0.01
SF3B2-213ENST00000533421 MYH2Q9UKX2 1941 aa14.96□□□□□ -0.02
SF3B2-213ENST00000533421 GAKO14976 1311 aa14.95□□□□□ -0.02
SF3B2-213ENST00000533421 CACNB3P54284 484 aa14.95□□□□□ -0.02
SF3B2-213ENST00000533421 MAP3K9P80192 1104 aa14.95□□□□□ -0.02
SF3B2-213ENST00000533421 CDC42EP5Q6NZY7 148 aa14.95□□□□□ -0.02
SF3B2-213ENST00000533421 WNK4Q96J92 1243 aa14.95□□□□□ -0.02
SF3B2-213ENST00000533421 ZNF512BQ96KM6 892 aaPredicted RBP14.95□□□□□ -0.02
SF3B2-213ENST00000533421 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
SF3B2-213ENST00000533421 RAI14Q9P0K7 980 aa14.95□□□□□ -0.02
SF3B2-213ENST00000533421 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
SF3B2-213ENST00000533421 MROH7-TTC4A0A0A0MT08 1334 aa14.94□□□□□ -0.02
SF3B2-213ENST00000533421 ENTPD3O75355 529 aa14.94□□□□□ -0.02
SF3B2-213ENST00000533421 MKRN3Q13064 507 aaKnown RBP14.94□□□□□ -0.02
SF3B2-213ENST00000533421 DBNDD2Q9BQY9 259 aa14.94□□□□□ -0.02
SF3B2-213ENST00000533421 ZNF341Q9BYN7 854 aa14.94□□□□□ -0.02
SF3B2-213ENST00000533421 AK9Q5TCS8 1911 aa14.94□□□□□ -0.02
SF3B2-213ENST00000533421 WDHD1O75717 1129 aaPredicted RBP14.93□□□□□ -0.02
SF3B2-213ENST00000533421 MCAMP43121 646 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 MECOMQ03112 1051 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 TMED8Q6PL24 325 aaPredicted RBP14.93□□□□□ -0.02
SF3B2-213ENST00000533421 CLASRPQ8N2M8 674 aaKnown RBP14.93□□□□□ -0.02
SF3B2-213ENST00000533421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.93□□□□□ -0.02
SF3B2-213ENST00000533421 RHPN1Q8TCX5 695 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 EAF2Q96CJ1 260 aaPredicted RBP14.93□□□□□ -0.02
SF3B2-213ENST00000533421 KIF1BPQ96EK5 621 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 CLMNQ96JQ2 1002 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 WRNIP1Q96S55 665 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 IDI2Q9BXS1 227 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 FZD1Q9UP38 647 aa14.93□□□□□ -0.02
SF3B2-213ENST00000533421 RAB11FIP3O75154 756 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 BAG3O95817 575 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
SF3B2-213ENST00000533421 PLCG2P16885 1265 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 BTDP43251 543 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 GTF2A2P52657 109 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 TCP10Q12799 353 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
SF3B2-213ENST00000533421 AACSQ86V21 672 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 CERS3Q8IU89 383 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 ZSCAN29Q8IWY8 852 aaPredicted RBP14.92□□□□□ -0.02
SF3B2-213ENST00000533421 OPTNQ96CV9 577 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 ELP3Q9H9T3 547 aa14.92□□□□□ -0.02
SF3B2-213ENST00000533421 LAMB1P07942 1786 aa14.91□□□□□ -0.02
SF3B2-213ENST00000533421 GPR75-ASB3A0A0A6YYF3 556 aa14.91□□□□□ -0.02
SF3B2-213ENST00000533421 IGHDP01880 384 aa14.91□□□□□ -0.02
SF3B2-213ENST00000533421 VGLL4Q14135 290 aa14.91□□□□□ -0.02
SF3B2-213ENST00000533421 NAA16Q6N069 864 aaPredicted RBP14.91□□□□□ -0.02
SF3B2-213ENST00000533421 PI16Q6UXB8 463 aa14.91□□□□□ -0.02
SF3B2-213ENST00000533421 NSUN4Q96CB9 384 aaKnown RBP14.91□□□□□ -0.02
SF3B2-213ENST00000533421 CFHR5Q9BXR6 569 aa14.91□□□□□ -0.02
SF3B2-213ENST00000533421 DBNLQ9UJU6 430 aaKnown RBP14.91□□□□□ -0.02
SF3B2-213ENST00000533421 OTOFQ9HC10 1997 aa14.91□□□□□ -0.02
SF3B2-213ENST00000533421 NPM3O75607 178 aaKnown RBP14.9□□□□□ -0.02
SF3B2-213ENST00000533421 RGS3P49796 1198 aa14.9□□□□□ -0.02
SF3B2-213ENST00000533421 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.9□□□□□ -0.02
SF3B2-213ENST00000533421 ERO1BQ86YB8 467 aa14.9□□□□□ -0.02
SF3B2-213ENST00000533421 IFNL1Q8IU54 200 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms