RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 CSADQ9Y600 493 aa28.96■■■□□ 2.23
SMPD1-209ENST00000533196 DCAF15Q66K64 600 aa28.95■■■□□ 2.22
SMPD1-209ENST00000533196 OTUD7BQ6GQQ9 843 aa28.95■■■□□ 2.22
SMPD1-209ENST00000533196 CDC42EP5Q6NZY7 148 aa28.95■■■□□ 2.22
SMPD1-209ENST00000533196 ITPRIPQ8IWB1 547 aa28.95■■■□□ 2.22
SMPD1-209ENST00000533196 SLF2Q8IX21 1173 aa28.95■■■□□ 2.22
SMPD1-209ENST00000533196 SSH3Q8TE77 659 aa28.95■■■□□ 2.22
SMPD1-209ENST00000533196 FAM151AQ8WW52 585 aa28.95■■■□□ 2.22
SMPD1-209ENST00000533196 GPR25O00155 361 aa28.94■■■□□ 2.22
SMPD1-209ENST00000533196 ZBTB7BO15156 539 aaPredicted RBP28.94■■■□□ 2.22
SMPD1-209ENST00000533196 ELP3Q9H9T3 547 aa28.94■■■□□ 2.22
SMPD1-209ENST00000533196 GPR108Q9NPR9 543 aa28.94■■■□□ 2.22
SMPD1-209ENST00000533196 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.94■■■□□ 2.22
SMPD1-209ENST00000533196 AK9Q5TCS8 1911 aa28.94■■■□□ 2.22
SMPD1-209ENST00000533196 TESPA1A2RU30 521 aaPredicted RBP28.93■■■□□ 2.22
SMPD1-209ENST00000533196 CCDC85CA6NKD9 419 aa28.93■■■□□ 2.22
SMPD1-209ENST00000533196 ZNF296Q8WUU4 475 aaPredicted RBP28.93■■■□□ 2.22
SMPD1-209ENST00000533196 OPTNQ96CV9 577 aa28.93■■■□□ 2.22
SMPD1-209ENST00000533196 GAKO14976 1311 aa28.93■■■□□ 2.22
SMPD1-209ENST00000533196 MS4A1P11836 297 aa28.92■■■□□ 2.22
SMPD1-209ENST00000533196 RLBP1P12271 317 aa28.92■■■□□ 2.22
SMPD1-209ENST00000533196 GJA5P36382 358 aa28.92■■■□□ 2.22
SMPD1-209ENST00000533196 VGLL4Q14135 290 aa28.92■■■□□ 2.22
SMPD1-209ENST00000533196 GORABQ5T7V8 394 aa28.92■■■□□ 2.22
SMPD1-209ENST00000533196 FAM163AQ96GL9 167 aaPredicted RBP28.92■■■□□ 2.22
SMPD1-209ENST00000533196 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.92■■■□□ 2.22
SMPD1-209ENST00000533196 PKN2Q16513 984 aaKnown RBP28.91■■■□□ 2.22
SMPD1-209ENST00000533196 DZIP1Q86YF9 867 aaKnown RBP28.91■■■□□ 2.22
SMPD1-209ENST00000533196 USP40Q9NVE5 1235 aa28.91■■■□□ 2.22
SMPD1-209ENST00000533196 ABCF2Q9UG63 623 aa28.91■■■□□ 2.22
SMPD1-209ENST00000533196 IGF2BP3O00425 579 aaKnown RBP eCLIP28.9■■■□□ 2.22
SMPD1-209ENST00000533196 ARID4AP29374 1257 aaPredicted RBP28.9■■■□□ 2.22
SMPD1-209ENST00000533196 ZNF341Q9BYN7 854 aa28.9■■■□□ 2.22
SMPD1-209ENST00000533196 FKTNO75072 461 aa28.89■■■□□ 2.22
SMPD1-209ENST00000533196 UQCRFS1P1P0C7P4 283 aa28.89■■■□□ 2.22
SMPD1-209ENST00000533196 ERICH6Q7L0X2 663 aa28.89■■■□□ 2.22
SMPD1-209ENST00000533196 WRNIP1Q96S55 665 aa28.89■■■□□ 2.22
SMPD1-209ENST00000533196 SPDYE5A6NIY4 337 aa28.88■■■□□ 2.21
SMPD1-209ENST00000533196 GTF2A2P52657 109 aa28.88■■■□□ 2.21
SMPD1-209ENST00000533196 OS9Q13438 667 aaPredicted RBP28.88■■■□□ 2.21
SMPD1-209ENST00000533196 SPATA5Q8NB90 893 aa28.88■■■□□ 2.21
SMPD1-209ENST00000533196 MS4A4AQ96JQ5 239 aa28.88■■■□□ 2.21
SMPD1-209ENST00000533196 IDI2Q9BXS1 227 aa28.88■■■□□ 2.21
SMPD1-209ENST00000533196 HMG20BQ9P0W2 317 aa28.88■■■□□ 2.21
SMPD1-209ENST00000533196 NOP58Q9Y2X3 529 aaKnown RBP28.88■■■□□ 2.21
SMPD1-209ENST00000533196 SURF6O75683 361 aaKnown RBP28.87■■■□□ 2.21
SMPD1-209ENST00000533196 NFIAQ12857 509 aa28.87■■■□□ 2.21
SMPD1-209ENST00000533196 ERO1BQ86YB8 467 aa28.87■■■□□ 2.21
SMPD1-209ENST00000533196 C1orf115Q9H7X2 142 aa28.87■■■□□ 2.21
SMPD1-209ENST00000533196 FAM198AQ9UFP1 575 aa28.87■■■□□ 2.21
SMPD1-209ENST00000533196 ENTPD3O75355 529 aa28.86■■■□□ 2.21
SMPD1-209ENST00000533196 SNCAIPQ9Y6H5 919 aa28.86■■■□□ 2.21
SMPD1-209ENST00000533196 TCP10Q12799 353 aa28.85■■■□□ 2.21
SMPD1-209ENST00000533196 TNNI3KQ59H18 835 aa28.85■■■□□ 2.21
SMPD1-209ENST00000533196 R3HDMLQ9H3Y0 253 aa28.85■■■□□ 2.21
SMPD1-209ENST00000533196 FPGT-TNNI3KV9GXZ4 949 aa28.85■■■□□ 2.21
SMPD1-209ENST00000533196 MROH7-TTC4A0A0A0MT08 1334 aa28.85■■■□□ 2.21
SMPD1-209ENST00000533196 MAP4K4O95819 1239 aaPredicted RBP28.84■■■□□ 2.21
SMPD1-209ENST00000533196 LDHCP07864 332 aa28.84■■■□□ 2.21
SMPD1-209ENST00000533196 RGS19P49795 217 aa28.84■■■□□ 2.21
SMPD1-209ENST00000533196 GSTO1P78417 241 aa28.84■■■□□ 2.21
SMPD1-209ENST00000533196 OTUD5Q96G74 571 aa28.84■■■□□ 2.21
SMPD1-209ENST00000533196 PTPN18Q99952 460 aa28.84■■■□□ 2.21
SMPD1-209ENST00000533196 ZNF112Q9UJU3 913 aa28.84■■■□□ 2.21
SMPD1-209ENST00000533196 IGSF3O75054 1194 aa28.83■■■□□ 2.21
SMPD1-209ENST00000533196 MECOMQ03112 1051 aa28.83■■■□□ 2.21
SMPD1-209ENST00000533196 CCDC158Q5M9N0 1113 aa28.83■■■□□ 2.21
SMPD1-209ENST00000533196 MIGA2Q7L4E1 593 aa28.83■■■□□ 2.21
SMPD1-209ENST00000533196 CNKSR2Q8WXI2 1034 aa28.83■■■□□ 2.21
SMPD1-209ENST00000533196 RFX7Q2KHR2 1363 aa28.83■■■□□ 2.21
SMPD1-209ENST00000533196 DOCK2Q92608 1830 aa28.83■■■□□ 2.21
SMPD1-209ENST00000533196 GPR75-ASB3A0A0A6YYF3 556 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 CCL15-CCL14A0A0B4J2E2 113 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 MCAMP43121 646 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 BTDP43251 543 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 RGS3P49796 1198 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 PPIL2Q13356 520 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 CCL15Q16663 113 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 BRI3BPQ8WY22 251 aa28.82■■■□□ 2.2
SMPD1-209ENST00000533196 ZKSCAN4Q969J2 545 aaPredicted RBP28.82■■■□□ 2.2
SMPD1-209ENST00000533196 NPM3O75607 178 aaKnown RBP28.81■■■□□ 2.2
SMPD1-209ENST00000533196 PPATQ06203 517 aa28.81■■■□□ 2.2
SMPD1-209ENST00000533196 CEP85Q6P2H3 762 aa28.81■■■□□ 2.2
SMPD1-209ENST00000533196 PANK1Q8TE04 598 aa28.81■■■□□ 2.2
SMPD1-209ENST00000533196 NSUN4Q96CB9 384 aaKnown RBP28.81■■■□□ 2.2
SMPD1-209ENST00000533196 ZNF512BQ96KM6 892 aaPredicted RBP28.81■■■□□ 2.2
SMPD1-209ENST00000533196 CETPP11597 493 aa28.8■■■□□ 2.2
SMPD1-209ENST00000533196 CRHR2Q13324 411 aa28.8■■■□□ 2.2
SMPD1-209ENST00000533196 TTC39AQ5SRH9 613 aa28.8■■■□□ 2.2
SMPD1-209ENST00000533196 PI16Q6UXB8 463 aa28.8■■■□□ 2.2
SMPD1-209ENST00000533196 ZCCHC17Q9NP64 241 aaKnown RBP28.8■■■□□ 2.2
SMPD1-209ENST00000533196 WDHD1O75717 1129 aaPredicted RBP28.79■■■□□ 2.2
SMPD1-209ENST00000533196 SNAPC2Q13487 334 aa28.79■■■□□ 2.2
SMPD1-209ENST00000533196 NOL9Q5SY16 702 aaKnown RBP28.79■■■□□ 2.2
SMPD1-209ENST00000533196 DBNDD2Q9BQY9 259 aa28.79■■■□□ 2.2
SMPD1-209ENST00000533196 RAI14Q9P0K7 980 aa28.79■■■□□ 2.2
SMPD1-209ENST00000533196 FBXO46Q6PJ61 603 aaPredicted RBP28.78■■■□□ 2.2
SMPD1-209ENST00000533196 TBC1D9Q6ZT07 1266 aa28.78■■■□□ 2.2
SMPD1-209ENST00000533196 ZNF384Q8TF68 577 aa28.78■■■□□ 2.2
SMPD1-209ENST00000533196 ERO1AQ96HE7 468 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms