RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 REM2Q8IYK8 340 aaPredicted RBP22.04■■□□□ 1.12
SMG1-203ENST00000532700 ANKRD13AQ8IZ07 590 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 ZNF296Q8WUU4 475 aaPredicted RBP22.04■■□□□ 1.12
SMG1-203ENST00000532700 PTPN18Q99952 460 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 HMG20BQ9P0W2 317 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 AK9Q5TCS8 1911 aa22.04■■□□□ 1.12
SMG1-203ENST00000532700 RPAP1Q9BWH6 1393 aaPredicted RBP22.03■■□□□ 1.12
SMG1-203ENST00000532700 ZBTB22O15209 634 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 ZBTB48P10074 688 aaPredicted RBP22.03■■□□□ 1.12
SMG1-203ENST00000532700 TBC1D9Q6ZT07 1266 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 FAM83AQ86UY5 434 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 IFNL1Q8IU54 200 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 OPTNQ96CV9 577 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 AKAP2Q9Y2D5 859 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 SNCAIPQ9Y6H5 919 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 GAKO14976 1311 aa22.03■■□□□ 1.12
SMG1-203ENST00000532700 MAST2Q6P0Q8 1798 aa22.02■■□□□ 1.12
SMG1-203ENST00000532700 MCAMP43121 646 aa22.02■■□□□ 1.12
SMG1-203ENST00000532700 SREBF2Q12772 1141 aa22.02■■□□□ 1.12
SMG1-203ENST00000532700 FKBP1CQ5VVH2 108 aa22.02■■□□□ 1.12
SMG1-203ENST00000532700 MIGA2Q7L4E1 593 aa22.02■■□□□ 1.12
SMG1-203ENST00000532700 ZKSCAN4Q969J2 545 aaPredicted RBP22.02■■□□□ 1.12
SMG1-203ENST00000532700 ABCF2Q9UG63 623 aa22.02■■□□□ 1.12
SMG1-203ENST00000532700 PDS5AQ29RF7 1337 aaKnown RBP22.02■■□□□ 1.12
SMG1-203ENST00000532700 CCDC85CA6NKD9 419 aa22.01■■□□□ 1.11
SMG1-203ENST00000532700 G3BP1Q13283 466 aaKnown RBP eCLIP22.01■■□□□ 1.11
SMG1-203ENST00000532700 MVPQ14764 893 aaKnown RBP22.01■■□□□ 1.11
SMG1-203ENST00000532700 MS4A4AQ96JQ5 239 aa22.01■■□□□ 1.11
SMG1-203ENST00000532700 DBNDD2Q9BQY9 259 aa22.01■■□□□ 1.11
SMG1-203ENST00000532700 TLR7Q9NYK1 1049 aaKnown RBP22.01■■□□□ 1.11
SMG1-203ENST00000532700 TMOD2Q9NZR1 351 aa22.01■■□□□ 1.11
SMG1-203ENST00000532700 ZSWIM8A7E2V4 1837 aa22.01■■□□□ 1.11
SMG1-203ENST00000532700 CDK5RAP2Q96SN8 1893 aa22■■□□□ 1.11
SMG1-203ENST00000532700 ATRNL1Q5VV63 1379 aa22■■□□□ 1.11
SMG1-203ENST00000532700 MANSC4A6NHS7 340 aaPredicted RBP22■■□□□ 1.11
SMG1-203ENST00000532700 GPR25O00155 361 aa22■■□□□ 1.11
SMG1-203ENST00000532700 ARID4AP29374 1257 aaPredicted RBP22■■□□□ 1.11
SMG1-203ENST00000532700 MAP3K9P80192 1104 aa22■■□□□ 1.11
SMG1-203ENST00000532700 CAP1Q01518 475 aa22■■□□□ 1.11
SMG1-203ENST00000532700 MECOMQ03112 1051 aa22■■□□□ 1.11
SMG1-203ENST00000532700 CEP85Q6P2H3 762 aa22■■□□□ 1.11
SMG1-203ENST00000532700 DDX4Q9NQI0 724 aaKnown RBP22■■□□□ 1.11
SMG1-203ENST00000532700 USP40Q9NVE5 1235 aa22■■□□□ 1.11
SMG1-203ENST00000532700 UNCXA6NJT0 531 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 INPP5BP32019 993 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 TNNI3KQ59H18 835 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 SH3BP5LQ7L8J4 393 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 SPATA5Q8NB90 893 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 FAM151AQ8WW52 585 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 WRNIP1Q96S55 665 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 CFHR5Q9BXR6 569 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 FPGT-TNNI3KV9GXZ4 949 aa21.99■■□□□ 1.11
SMG1-203ENST00000532700 SURF6O75683 361 aaKnown RBP21.98■■□□□ 1.11
SMG1-203ENST00000532700 BRI3BPQ8WY22 251 aa21.98■■□□□ 1.11
SMG1-203ENST00000532700 OTUD5Q96G74 571 aa21.98■■□□□ 1.11
SMG1-203ENST00000532700 SNRKQ9NRH2 765 aa21.98■■□□□ 1.11
SMG1-203ENST00000532700 SIPA1L1O43166 1804 aa21.97■■□□□ 1.11
SMG1-203ENST00000532700 TESPA1A2RU30 521 aaPredicted RBP21.97■■□□□ 1.11
SMG1-203ENST00000532700 WDHD1O75717 1129 aaPredicted RBP21.97■■□□□ 1.11
SMG1-203ENST00000532700 RGS3P49796 1198 aa21.97■■□□□ 1.11
SMG1-203ENST00000532700 DZIP1Q86YF9 867 aaKnown RBP21.97■■□□□ 1.11
SMG1-203ENST00000532700 NOP58Q9Y2X3 529 aaKnown RBP21.97■■□□□ 1.11
SMG1-203ENST00000532700 MROH7-TTC4A0A0A0MT08 1334 aa21.97■■□□□ 1.11
SMG1-203ENST00000532700 BTDP43251 543 aa21.96■■□□□ 1.11
SMG1-203ENST00000532700 RHBDL3P58872 404 aa21.96■■□□□ 1.11
SMG1-203ENST00000532700 CRHR2Q13324 411 aa21.96■■□□□ 1.11
SMG1-203ENST00000532700 CTU1Q7Z7A3 348 aaKnown RBP21.96■■□□□ 1.11
SMG1-203ENST00000532700 DBNLQ9UJU6 430 aaKnown RBP21.96■■□□□ 1.11
SMG1-203ENST00000532700 PHIPQ8WWQ0 1821 aa21.95■■□□□ 1.1
SMG1-203ENST00000532700 SPDYE5A6NIY4 337 aa21.95■■□□□ 1.1
SMG1-203ENST00000532700 GORABQ5T7V8 394 aa21.95■■□□□ 1.1
SMG1-203ENST00000532700 C20orf194Q5TEA3 1177 aa21.95■■□□□ 1.1
SMG1-203ENST00000532700 ZGPATQ8N5A5 531 aaKnown RBP21.95■■□□□ 1.1
SMG1-203ENST00000532700 NSUN4Q96CB9 384 aaKnown RBP21.95■■□□□ 1.1
SMG1-203ENST00000532700 EAF2Q96CJ1 260 aaPredicted RBP21.95■■□□□ 1.1
SMG1-203ENST00000532700 EXOC6BQ9Y2D4 811 aa21.95■■□□□ 1.1
SMG1-203ENST00000532700 COG6Q9Y2V7 657 aa21.95■■□□□ 1.1
SMG1-203ENST00000532700 DDTLA6NHG4 134 aaPredicted RBP21.94■■□□□ 1.1
SMG1-203ENST00000532700 OS9Q13438 667 aaPredicted RBP21.94■■□□□ 1.1
SMG1-203ENST00000532700 FAM43AQ8N2R8 423 aa21.94■■□□□ 1.1
SMG1-203ENST00000532700 FAM163AQ96GL9 167 aaPredicted RBP21.94■■□□□ 1.1
SMG1-203ENST00000532700 IDI2Q9BXS1 227 aa21.94■■□□□ 1.1
SMG1-203ENST00000532700 GPR108Q9NPR9 543 aa21.94■■□□□ 1.1
SMG1-203ENST00000532700 CSADQ9Y600 493 aa21.94■■□□□ 1.1
SMG1-203ENST00000532700 FOCADQ5VW36 1801 aa21.94■■□□□ 1.1
SMG1-203ENST00000532700 CCL15-CCL14A0A0B4J2E2 113 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 DOCK1Q14185 1865 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 CCL15Q16663 113 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 NOM1Q5C9Z4 860 aaKnown RBP21.93■■□□□ 1.1
SMG1-203ENST00000532700 ERICH6Q7L0X2 663 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 ADGRA1Q86SQ6 560 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 SIRT2Q8IXJ6 389 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 ZNF341Q9BYN7 854 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 CCDC8Q9H0W5 538 aaPredicted RBP21.93■■□□□ 1.1
SMG1-203ENST00000532700 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.93■■□□□ 1.1
SMG1-203ENST00000532700 ZNF112Q9UJU3 913 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 NDUFB9Q9Y6M9 179 aa21.93■■□□□ 1.1
SMG1-203ENST00000532700 GPR75-ASB3A0A0A6YYF3 556 aa21.92■■□□□ 1.1
SMG1-203ENST00000532700 IRF6O14896 467 aa21.92■■□□□ 1.1
SMG1-203ENST00000532700 FKTNO75072 461 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms