RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
PPFIA1-219ENST00000531657 CARMIL3Q8ND23 1372 aa11.12□□□□□ -0.63
PPFIA1-219ENST00000531657 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 TOM1O60784 492 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 PICALMQ13492 652 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 DHX8Q14562 1220 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 NOM1Q5C9Z4 860 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 STRBPQ96SI9 672 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 ANGEL1Q9UNK9 670 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 V9GYY5 206 aaPredicted RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 FOXN1O15353 648 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 CIAO1O76071 339 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 GOLGA8HP0CJ92 632 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 EXOSC10Q01780 885 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 KRT40Q6A162 431 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 NLRP3Q96P20 1036 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 CFAP45Q9UL16 551 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 MAGEB6P1A0A0J9YX57 407 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 HMGB1P09429 215 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 AKAP17AQ02040 695 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 GRIN1Q05586 938 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 WTAPQ15007 396 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 DZIP1Q86YF9 867 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 ZNF34Q8IZ26 560 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 AK7Q96M32 723 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 MXD3Q9BW11 206 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 MCM9Q9NXL9 1143 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 CCDC39Q9UFE4 941 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
PPFIA1-219ENST00000531657 ERCC3P19447 782 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 AFMP43652 599 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 APOA5Q6Q788 366 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 RASSF8Q8NHQ8 419 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 RASGRP4Q8TDF6 673 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 NACAP1Q9BZK3 213 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 CABP5Q9NP86 173 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 RTCBQ9Y3I0 505 aaKnown RBP11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 UQCRHP07919 91 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 GRIK5Q16478 980 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 CPLX2Q6PUV4 134 aaKnown RBP11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 MAPKAPK5Q8IW41 473 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 ARHGEF1Q92888 912 aaKnown RBP11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 ZKSCAN5Q9Y2L8 839 aa11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
PPFIA1-219ENST00000531657 FAM170AA1A519 330 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 GSG1L2A8MUP6 293 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 VEGFAP15692 232 aaPredicted RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 ZSCAN25Q6NSZ9 544 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 CLEC10AQ8IUN9 316 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 MB21D2Q8IYB1 491 aaPredicted RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 MINPP1Q9UNW1 487 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 BCL9O00512 1426 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 PES1O00541 588 aaKnown RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 SPTLC2O15270 562 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 NTSR2O95665 410 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 ZFYP08048 801 aaPredicted RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 USP5P45974 858 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 PNOCQ13519 176 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 TRMT44Q8IYL2 757 aaKnown RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 KLHL34Q8N239 644 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 PPP1R9BQ96SB3 815 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 SCAF8Q9UPN6 1271 aaKnown RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 KDM3BQ7LBC6 1761 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 STX17P56962 302 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 RPS8P62241 208 aaKnown RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 HMGN5P82970 282 aaKnown RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 DPCR1Q3MIW9 517 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 ZNF396Q96N95 335 aaPredicted RBP11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 CLIP2Q9UDT6 1046 aa11.09□□□□□ -0.63
PPFIA1-219ENST00000531657 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 USP49Q70CQ1 688 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 GPKOWQ92917 476 aaPredicted RBP eCLIP11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 G3V3G9 751 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 WDHD1O75717 1129 aaPredicted RBP11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 UQCRFS1P1P0C7P4 283 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 SSRP1Q08945 709 aaKnown RBP11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 RTN1Q16799 776 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 DCAF8Q5TAQ9 597 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 VGLL2Q8N8G2 317 aa11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 PPP1R1BQ9UD71 204 aaPredicted RBP11.08□□□□□ -0.64
PPFIA1-219ENST00000531657 PPARAQ07869 468 aa11.07□□□□□ -0.64
PPFIA1-219ENST00000531657 ZNF174Q15697 407 aa11.07□□□□□ -0.64
PPFIA1-219ENST00000531657 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
PPFIA1-219ENST00000531657 MYSM1Q5VVJ2 828 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms