RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TMEM39BQ9GZU3 492 aa16.34■□□□□ 0.21
CAPN1-215ENST00000528396 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-215ENST00000528396 ZBTB47Q9UFB7 747 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-215ENST00000528396 AOC2O75106 756 aa16.33■□□□□ 0.2
CAPN1-215ENST00000528396 MAP2K2P36507 400 aa16.33■□□□□ 0.2
CAPN1-215ENST00000528396 IREB2P48200 963 aaKnown RBP16.33■□□□□ 0.2
CAPN1-215ENST00000528396 NOGQ13253 232 aa16.33■□□□□ 0.2
CAPN1-215ENST00000528396 NBPF12Q5TAG4 269 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-215ENST00000528396 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
CAPN1-215ENST00000528396 MOB2Q70IA6 237 aa16.33■□□□□ 0.2
CAPN1-215ENST00000528396 MROH7-TTC4A0A0A0MT08 1334 aa16.33■□□□□ 0.2
CAPN1-215ENST00000528396 HSPA1AP0DMV8 641 aaKnown RBP16.32■□□□□ 0.2
CAPN1-215ENST00000528396 HSPA1BP0DMV9 641 aaKnown RBP16.32■□□□□ 0.2
CAPN1-215ENST00000528396 BTDP43251 543 aa16.32■□□□□ 0.2
CAPN1-215ENST00000528396 ZAP70P43403 619 aa16.32■□□□□ 0.2
CAPN1-215ENST00000528396 NAA16Q6N069 864 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-215ENST00000528396 FAM83AQ86UY5 434 aa16.32■□□□□ 0.2
CAPN1-215ENST00000528396 SUPT16HQ9Y5B9 1047 aaKnown RBP16.32■□□□□ 0.2
CAPN1-215ENST00000528396 GAKO14976 1311 aa16.31■□□□□ 0.2
CAPN1-215ENST00000528396 IDH1O75874 414 aaKnown RBP16.31■□□□□ 0.2
CAPN1-215ENST00000528396 CYP2E1P05181 493 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-215ENST00000528396 TCP10Q12799 353 aa16.31■□□□□ 0.2
CAPN1-215ENST00000528396 AAMPQ13685 434 aa16.31■□□□□ 0.2
CAPN1-215ENST00000528396 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
CAPN1-215ENST00000528396 GPATCH3Q96I76 525 aa16.31■□□□□ 0.2
CAPN1-215ENST00000528396 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
CAPN1-215ENST00000528396 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
CAPN1-215ENST00000528396 MYH2Q9UKX2 1941 aa16.3■□□□□ 0.2
CAPN1-215ENST00000528396 BAG3O95817 575 aa16.3■□□□□ 0.2
CAPN1-215ENST00000528396 MAP3K12Q12852 859 aa16.3■□□□□ 0.2
CAPN1-215ENST00000528396 FAM163AQ96GL9 167 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-215ENST00000528396 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-215ENST00000528396 IGSF3O75054 1194 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 SLC10A3P09131 477 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-215ENST00000528396 DCAF15Q66K64 600 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 RASAL3Q86YV0 1011 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 ZSCAN29Q8IWY8 852 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-215ENST00000528396 FAM151AQ8WW52 585 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 SLC10A4Q96EP9 437 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 DNAJC2Q99543 621 aaKnown RBP16.29■□□□□ 0.2
CAPN1-215ENST00000528396 FZD1Q9UP38 647 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 PCNTO95613 3336 aa16.29■□□□□ 0.2
CAPN1-215ENST00000528396 GPR75-ASB3A0A0A6YYF3 556 aa16.28■□□□□ 0.2
CAPN1-215ENST00000528396 PLCG2P16885 1265 aa16.28■□□□□ 0.2
CAPN1-215ENST00000528396 RGS3P49796 1198 aa16.28■□□□□ 0.2
CAPN1-215ENST00000528396 NFIAQ12857 509 aa16.28■□□□□ 0.2
CAPN1-215ENST00000528396 PICALMQ13492 652 aa16.28■□□□□ 0.2
CAPN1-215ENST00000528396 TEPSINQ96N21 525 aa16.28■□□□□ 0.2
CAPN1-215ENST00000528396 PIH1D3Q9NQM4 214 aaKnown RBP16.28■□□□□ 0.2
CAPN1-215ENST00000528396 NDUFB9Q9Y6M9 179 aa16.28■□□□□ 0.2
CAPN1-215ENST00000528396 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
CAPN1-215ENST00000528396 UNCXA6NJT0 531 aa16.27■□□□□ 0.2
CAPN1-215ENST00000528396 MAP4K4O95819 1239 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-215ENST00000528396 KIF23Q02241 960 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-215ENST00000528396 CDAN1Q8IWY9 1227 aa16.27■□□□□ 0.2
CAPN1-215ENST00000528396 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
CAPN1-215ENST00000528396 ANKRD13AQ8IZ07 590 aa16.27■□□□□ 0.2
CAPN1-215ENST00000528396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
CAPN1-215ENST00000528396 WBP1LQ9NX94 342 aa16.27■□□□□ 0.2
CAPN1-215ENST00000528396 CSADQ9Y600 493 aa16.27■□□□□ 0.2
CAPN1-215ENST00000528396 RPAP1Q9BWH6 1393 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-215ENST00000528396 AKAP11Q9UKA4 1901 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 FAM155AB1AL88 458 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-215ENST00000528396 GOLIM4O00461 696 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 ENTPD3O75355 529 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 USP2O75604 605 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-215ENST00000528396 CYP7A1P22680 504 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
CAPN1-215ENST00000528396 MAP3K11Q16584 847 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 LDLRAD1Q5T700 205 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-215ENST00000528396 MAGEB6Q8N7X4 407 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 ZNF384Q8TF68 577 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 IDI2Q9BXS1 227 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 AATFQ9NY61 560 aaKnown RBP eCLIP16.26■□□□□ 0.196e-6■■■■■ 54.7
CAPN1-215ENST00000528396 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
CAPN1-215ENST00000528396 AK9Q5TCS8 1911 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 ATP5JP18859 108 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 CTCFP49711 727 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-215ENST00000528396 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-215ENST00000528396 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 CSRNP1Q96S65 589 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 BOLA2Q9H3K6 86 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-215ENST00000528396 ECHDC1Q9NTX5 307 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 MAST2Q6P0Q8 1798 aa16.25■□□□□ 0.19
CAPN1-215ENST00000528396 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 FOXN1O15353 648 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 CA12O43570 354 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 WDHD1O75717 1129 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-215ENST00000528396 MAP3K9P80192 1104 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 HDAC1Q13547 482 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-215ENST00000528396 MIGA2Q7L4E1 593 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 GCC1Q96CN9 775 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
CAPN1-215ENST00000528396 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms