RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 CCDC150Q8NCX0 1101 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 VPS54Q9P1Q0 977 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 RAD50Q92878 1312 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 PI16Q6UXB8 463 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 RBM17Q96I25 401 aaKnown RBP9.42□□□□□ -0.9
CHD7-203ENST00000525508 VPS16Q9H269 839 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 GREM2Q9H772 168 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 RMND1Q9NWS8 449 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 GUCA1BQ9UMX6 200 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 DDX39AO00148 427 aaKnown RBP9.42□□□□□ -0.9
CHD7-203ENST00000525508 UBXN1Q04323 297 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 STXBP4Q6ZWJ1 553 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 IQUBQ8NA54 791 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 EEF2KMTQ96G04 330 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 CAPZA3Q96KX2 299 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 MAGI2Q86UL8 1455 aa9.42□□□□□ -0.9
CHD7-203ENST00000525508 BMP15O95972 392 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 DCAF17Q5H9S7 520 aaPredicted RBP9.41□□□□□ -0.9
CHD7-203ENST00000525508 FAM114A1Q8IWE2 563 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 ALS2CR12Q96Q35 445 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 ADORA1P30542 326 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 UBE4AQ14139 1066 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 ME3Q16798 604 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 PPP4R3BQ5MIZ7 849 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 MFSD14BQ5SR56 506 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 E7EWF7 191 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 NEMFO60524 1076 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 CA8P35219 290 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 PPARDQ03181 441 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 USPL1Q5W0Q7 1092 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 TBC1D7Q9P0N9 293 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 CEP170Q5SW79 1584 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 EIF2AK4Q9P2K8 1649 aaKnown RBP9.41□□□□□ -0.9
CHD7-203ENST00000525508 RTL9Q8NET4 1388 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 NPC1L1Q9UHC9 1359 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 SETD1BQ9UPS6 1966 aaKnown RBP9.41□□□□□ -0.9
CHD7-203ENST00000525508 TMEM110-MUSTN1A8MSY1 372 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 IGSF3O75054 1194 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 CAVIN2O95810 425 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 SLC1A4P43007 532 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 SSH3Q8TE77 659 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 SYNCQ9H7C4 482 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 STK32BQ9NY57 414 aa9.41□□□□□ -0.9
CHD7-203ENST00000525508 SNAP23O00161 211 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 TRAF5O00463 557 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 CCNT1O60563 726 aaKnown RBP9.4□□□□□ -0.9
CHD7-203ENST00000525508 FAM13AO94988 1023 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 ANO1Q5XXA6 986 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 NSMFQ6X4W1 530 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 TMEM87AQ8NBN3 555 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 PHKA1P46020 1223 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 SIK1P57059 783 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 RAPGEF1Q13905 1077 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 KRT40Q6A162 431 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 DYMQ7RTS9 669 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 BRAPQ7Z569 592 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 CCDC42Q96M95 316 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 H0YIN7 160 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 GOLGA8HP0CJ92 632 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 KRT13P13646 458 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 GBP2P32456 591 aaPredicted RBP9.4□□□□□ -0.9
CHD7-203ENST00000525508 MAATS1Q7Z4T9 603 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 HOOK3Q86VS8 718 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 PLEKHF1Q96S99 279 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 PYM1Q9BRP8 204 aaKnown RBP9.4□□□□□ -0.9
CHD7-203ENST00000525508 KCNH3Q9ULD8 1083 aa9.4□□□□□ -0.9
CHD7-203ENST00000525508 CFBP00751 764 aa9.4□□□□□ -0.91
CHD7-203ENST00000525508 GTF2F1P35269 517 aaKnown RBP eCLIP9.4□□□□□ -0.91
CHD7-203ENST00000525508 CTSWP56202 376 aa9.4□□□□□ -0.91
CHD7-203ENST00000525508 PPP1R9BQ96SB3 815 aa9.4□□□□□ -0.91
CHD7-203ENST00000525508 GBP3Q9H0R5 595 aa9.4□□□□□ -0.91
CHD7-203ENST00000525508 SEC31BQ9NQW1 1179 aa9.4□□□□□ -0.91
CHD7-203ENST00000525508 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.91
CHD7-203ENST00000525508 MAST1Q9Y2H9 1570 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 MYCLP12524 364 aaPredicted RBP9.39□□□□□ -0.91
CHD7-203ENST00000525508 HSPA4P34932 840 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 RNASE9P60153 205 aaKnown RBP9.39□□□□□ -0.91
CHD7-203ENST00000525508 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 FERMT2Q96AC1 680 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 ROBO2Q9HCK4 1378 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 ATP5JP18859 108 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 ADCK5Q3MIX3 580 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 SYT10Q6XYQ8 523 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
CHD7-203ENST00000525508 CCDC97Q96F63 343 aaPredicted RBP9.39□□□□□ -0.91
CHD7-203ENST00000525508 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 BABAM1Q9NWV8 329 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 ABCC4O15439 1325 aa9.39□□□□□ -0.91
CHD7-203ENST00000525508 CYLC1P35663 651 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms