RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 C20orf194Q5TEA3 1177 aa21.5■■□□□ 1.03
NR1H3-228ENST00000525441 CDC42EP5Q6NZY7 148 aa21.5■■□□□ 1.03
NR1H3-228ENST00000525441 SLC10A4Q96EP9 437 aa21.5■■□□□ 1.03
NR1H3-228ENST00000525441 FZD1Q9UP38 647 aa21.5■■□□□ 1.03
NR1H3-228ENST00000525441 USP2O75604 605 aaPredicted RBP21.49■■□□□ 1.03
NR1H3-228ENST00000525441 MCAMP43121 646 aa21.49■■□□□ 1.03
NR1H3-228ENST00000525441 GSTO1P78417 241 aa21.49■■□□□ 1.03
NR1H3-228ENST00000525441 CSRNP1Q96S65 589 aa21.49■■□□□ 1.03
NR1H3-228ENST00000525441 USP40Q9NVE5 1235 aa21.49■■□□□ 1.03
NR1H3-228ENST00000525441 GAKO14976 1311 aa21.49■■□□□ 1.03
NR1H3-228ENST00000525441 PI16Q6UXB8 463 aa21.48■■□□□ 1.03
NR1H3-228ENST00000525441 ANKRD13AQ8IZ07 590 aa21.48■■□□□ 1.03
NR1H3-228ENST00000525441 TNS4Q8IZW8 715 aa21.48■■□□□ 1.03
NR1H3-228ENST00000525441 FAM163AQ96GL9 167 aaPredicted RBP21.48■■□□□ 1.03
NR1H3-228ENST00000525441 ZNF512BQ96KM6 892 aaPredicted RBP21.48■■□□□ 1.03
NR1H3-228ENST00000525441 SAGE1Q9NXZ1 904 aa21.48■■□□□ 1.03
NR1H3-228ENST00000525441 DBNLQ9UJU6 430 aaKnown RBP21.48■■□□□ 1.03
NR1H3-228ENST00000525441 RPAP1Q9BWH6 1393 aaPredicted RBP21.48■■□□□ 1.03
NR1H3-228ENST00000525441 LDHCP07864 332 aa21.47■■□□□ 1.03
NR1H3-228ENST00000525441 MECOMQ03112 1051 aa21.47■■□□□ 1.03
NR1H3-228ENST00000525441 CDAN1Q8IWY9 1227 aa21.47■■□□□ 1.03
NR1H3-228ENST00000525441 FAM151AQ8WW52 585 aa21.47■■□□□ 1.03
NR1H3-228ENST00000525441 EAF2Q96CJ1 260 aaPredicted RBP21.47■■□□□ 1.03
NR1H3-228ENST00000525441 CCDC8Q9H0W5 538 aaPredicted RBP21.47■■□□□ 1.03
NR1H3-228ENST00000525441 RAI14Q9P0K7 980 aa21.47■■□□□ 1.03
NR1H3-228ENST00000525441 LRP2BPQ9P2M1 347 aa21.47■■□□□ 1.03
NR1H3-228ENST00000525441 SREBF2Q12772 1141 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 SPRYD7Q5W111 196 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 TBC1D9Q6ZT07 1266 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 AACSQ86V21 672 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 SIRT2Q8IXJ6 389 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 RHPN1Q8TCX5 695 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 KIF1BPQ96EK5 621 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 TSKSQ9UJT2 592 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 MROH7-TTC4A0A0A0MT08 1334 aa21.46■■□□□ 1.03
NR1H3-228ENST00000525441 RAB11FIP3O75154 756 aa21.45■■□□□ 1.02
NR1H3-228ENST00000525441 MKRN3Q13064 507 aaKnown RBP21.45■■□□□ 1.02
NR1H3-228ENST00000525441 DCAF15Q66K64 600 aa21.45■■□□□ 1.02
NR1H3-228ENST00000525441 CLMNQ96JQ2 1002 aa21.45■■□□□ 1.02
NR1H3-228ENST00000525441 SNRKQ9NRH2 765 aa21.45■■□□□ 1.02
NR1H3-228ENST00000525441 RNF186Q9NXI6 227 aa21.45■■□□□ 1.02
NR1H3-228ENST00000525441 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.02
NR1H3-228ENST00000525441 MYH2Q9UKX2 1941 aa21.45■■□□□ 1.02
NR1H3-228ENST00000525441 IGSF3O75054 1194 aa21.44■■□□□ 1.02
NR1H3-228ENST00000525441 ZBTB48P10074 688 aaPredicted RBP21.44■■□□□ 1.02
NR1H3-228ENST00000525441 BTDP43251 543 aa21.44■■□□□ 1.02
NR1H3-228ENST00000525441 MAP3K9P80192 1104 aa21.44■■□□□ 1.02
NR1H3-228ENST00000525441 TCP10Q12799 353 aa21.44■■□□□ 1.02
NR1H3-228ENST00000525441 CLASRPQ8N2M8 674 aaKnown RBP21.44■■□□□ 1.02
NR1H3-228ENST00000525441 NSUN4Q96CB9 384 aaKnown RBP21.44■■□□□ 1.02
NR1H3-228ENST00000525441 WNK4Q96J92 1243 aa21.44■■□□□ 1.02
NR1H3-228ENST00000525441 TLR7Q9NYK1 1049 aaKnown RBP21.44■■□□□ 1.02
NR1H3-228ENST00000525441 GPR75-ASB3A0A0A6YYF3 556 aa21.43■■□□□ 1.02
NR1H3-228ENST00000525441 TRPA1O75762 1119 aa21.43■■□□□ 1.02
NR1H3-228ENST00000525441 MAP4K4O95819 1239 aaPredicted RBP21.43■■□□□ 1.02
NR1H3-228ENST00000525441 NFIAQ12857 509 aa21.43■■□□□ 1.02
NR1H3-228ENST00000525441 IFFO2Q5TF58 517 aa21.43■■□□□ 1.02
NR1H3-228ENST00000525441 IDI2Q9BXS1 227 aa21.43■■□□□ 1.02
NR1H3-228ENST00000525441 IL1RAPL2Q9NP60 686 aa21.43■■□□□ 1.02
NR1H3-228ENST00000525441 CSADQ9Y600 493 aa21.43■■□□□ 1.02
NR1H3-228ENST00000525441 MANSC4A6NHS7 340 aaPredicted RBP21.42■■□□□ 1.02
NR1H3-228ENST00000525441 APBB1O00213 710 aa21.42■■□□□ 1.02
NR1H3-228ENST00000525441 ENTPD3O75355 529 aa21.42■■□□□ 1.02
NR1H3-228ENST00000525441 TM4SF4P48230 202 aa21.42■■□□□ 1.02
NR1H3-228ENST00000525441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.42■■□□□ 1.02
NR1H3-228ENST00000525441 NOL10Q9BSC4 688 aaKnown RBP21.42■■□□□ 1.02
NR1H3-228ENST00000525441 FAM198AQ9UFP1 575 aa21.42■■□□□ 1.02
NR1H3-228ENST00000525441 AKAP11Q9UKA4 1901 aa21.41■■□□□ 1.02
NR1H3-228ENST00000525441 RGS3P49796 1198 aa21.41■■□□□ 1.02
NR1H3-228ENST00000525441 RRP1P56182 461 aaKnown RBP21.41■■□□□ 1.02
NR1H3-228ENST00000525441 INHBEP58166 350 aa21.41■■□□□ 1.02
NR1H3-228ENST00000525441 ZNF341Q9BYN7 854 aa21.41■■□□□ 1.02
NR1H3-228ENST00000525441 ELP3Q9H9T3 547 aa21.41■■□□□ 1.02
NR1H3-228ENST00000525441 CYP2E1P05181 493 aaPredicted RBP21.4■■□□□ 1.02
NR1H3-228ENST00000525441 IFIT2P09913 472 aaKnown RBP21.4■■□□□ 1.02
NR1H3-228ENST00000525441 ZAP70P43403 619 aa21.4■■□□□ 1.02
NR1H3-228ENST00000525441 NAA16Q6N069 864 aaPredicted RBP21.4■■□□□ 1.02
NR1H3-228ENST00000525441 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.4■■□□□ 1.02
NR1H3-228ENST00000525441 ZNF384Q8TF68 577 aa21.4■■□□□ 1.02
NR1H3-228ENST00000525441 WRNIP1Q96S55 665 aa21.4■■□□□ 1.02
NR1H3-228ENST00000525441 VGLL4Q14135 290 aa21.39■■□□□ 1.01
NR1H3-228ENST00000525441 RFX7Q2KHR2 1363 aa21.38■■□□□ 1.01
NR1H3-228ENST00000525441 NPM3O75607 178 aaKnown RBP21.38■■□□□ 1.01
NR1H3-228ENST00000525441 WDHD1O75717 1129 aaPredicted RBP21.38■■□□□ 1.01
NR1H3-228ENST00000525441 BAG3O95817 575 aa21.38■■□□□ 1.01
NR1H3-228ENST00000525441 ALDH1A1P00352 501 aa21.38■■□□□ 1.01
NR1H3-228ENST00000525441 MIGA2Q7L4E1 593 aa21.38■■□□□ 1.01
NR1H3-228ENST00000525441 ZSCAN29Q8IWY8 852 aaPredicted RBP21.38■■□□□ 1.01
NR1H3-228ENST00000525441 OPTNQ96CV9 577 aa21.38■■□□□ 1.01
NR1H3-228ENST00000525441 PLCG2P16885 1265 aa21.37■■□□□ 1.01
NR1H3-228ENST00000525441 RHBDL3P58872 404 aa21.37■■□□□ 1.01
NR1H3-228ENST00000525441 PICALMQ13492 652 aa21.37■■□□□ 1.01
NR1H3-228ENST00000525441 PIH1D3Q9NQM4 214 aaKnown RBP21.37■■□□□ 1.01
NR1H3-228ENST00000525441 OTOFQ9HC10 1997 aa21.36■■□□□ 1.01
NR1H3-228ENST00000525441 AK9Q5TCS8 1911 aa21.36■■□□□ 1.01
NR1H3-228ENST00000525441 OTUD7BQ6GQQ9 843 aa21.36■■□□□ 1.01
NR1H3-228ENST00000525441 TMED8Q6PL24 325 aaPredicted RBP21.36■■□□□ 1.01
NR1H3-228ENST00000525441 ZFPM1Q8IX07 1006 aa21.36■■□□□ 1.01
NR1H3-228ENST00000525441 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
NR1H3-228ENST00000525441 IDH1O75874 414 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms