RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 FAM151AQ8WW52 585 aa21.41■■□□□ 1.02
TSKU-202ENST00000525167 ZKSCAN4Q969J2 545 aaPredicted RBP21.41■■□□□ 1.02
TSKU-202ENST00000525167 ZNF341Q9BYN7 854 aa21.41■■□□□ 1.02
TSKU-202ENST00000525167 HDAC5Q9UQL6 1122 aa21.41■■□□□ 1.02
TSKU-202ENST00000525167 IRF6O14896 467 aa21.4■■□□□ 1.02
TSKU-202ENST00000525167 GNRH1P01148 92 aa21.4■■□□□ 1.02
TSKU-202ENST00000525167 ATG9AQ7Z3C6 839 aa21.4■■□□□ 1.02
TSKU-202ENST00000525167 ZNF333Q96JL9 665 aa21.4■■□□□ 1.02
TSKU-202ENST00000525167 SMC4Q9NTJ3 1288 aa21.4■■□□□ 1.02
TSKU-202ENST00000525167 GNL3LQ9NVN8 582 aaKnown RBP21.4■■□□□ 1.02
TSKU-202ENST00000525167 SALL1Q9NSC2 1324 aa21.39■■□□□ 1.01
TSKU-202ENST00000525167 BTBD19C9JJ37 291 aa21.39■■□□□ 1.01
TSKU-202ENST00000525167 SEMA3EO15041 775 aa21.39■■□□□ 1.01
TSKU-202ENST00000525167 CT47B1P0C2W7 299 aaPredicted RBP21.39■■□□□ 1.01
TSKU-202ENST00000525167 UBTFL1P0CB47 393 aaPredicted RBP21.39■■□□□ 1.01
TSKU-202ENST00000525167 KIF22Q14807 665 aa21.39■■□□□ 1.01
TSKU-202ENST00000525167 SLC9C1Q4G0N8 1177 aa21.39■■□□□ 1.01
TSKU-202ENST00000525167 TMEM106CQ9BVX2 250 aa21.39■■□□□ 1.01
TSKU-202ENST00000525167 DAGLAQ9Y4D2 1042 aa21.39■■□□□ 1.01
TSKU-202ENST00000525167 MKI67P46013 3256 aaKnown RBP21.39■■□□□ 1.01
TSKU-202ENST00000525167 ATP2B3Q16720 1220 aa21.38■■□□□ 1.01
TSKU-202ENST00000525167 CEP126Q9P2H0 1117 aa21.38■■□□□ 1.01
TSKU-202ENST00000525167 ZNF112Q9UJU3 913 aa21.38■■□□□ 1.01
TSKU-202ENST00000525167 PRMT2P55345 433 aa21.37■■□□□ 1.01
TSKU-202ENST00000525167 LACTBP83111 547 aaPredicted RBP21.37■■□□□ 1.01
TSKU-202ENST00000525167 PTCH2Q9Y6C5 1203 aa21.37■■□□□ 1.01
TSKU-202ENST00000525167 BRCA2P51587 3418 aa21.36■■□□□ 1.01
TSKU-202ENST00000525167 LDHBP07195 334 aaKnown RBP21.36■■□□□ 1.01
TSKU-202ENST00000525167 IL15P40933 162 aaPredicted RBP21.36■■□□□ 1.01
TSKU-202ENST00000525167 CDC42EP5Q6NZY7 148 aa21.36■■□□□ 1.01
TSKU-202ENST00000525167 TRMT2AQ8IZ69 625 aaKnown RBP21.36■■□□□ 1.01
TSKU-202ENST00000525167 DENND2AQ9ULE3 1009 aa21.36■■□□□ 1.01
TSKU-202ENST00000525167 EN2P19622 333 aaPredicted RBP21.35■■□□□ 1.01
TSKU-202ENST00000525167 PRDX5P30044 214 aa21.35■■□□□ 1.01
TSKU-202ENST00000525167 INPP5BP32019 993 aa21.35■■□□□ 1.01
TSKU-202ENST00000525167 NOL9Q5SY16 702 aaKnown RBP21.35■■□□□ 1.01
TSKU-202ENST00000525167 MIGA2Q7L4E1 593 aa21.35■■□□□ 1.01
TSKU-202ENST00000525167 ANKRD23Q86SG2 305 aa21.35■■□□□ 1.01
TSKU-202ENST00000525167 ZGPATQ8N5A5 531 aaKnown RBP21.35■■□□□ 1.01
TSKU-202ENST00000525167 API5Q9BZZ5 524 aaKnown RBP21.35■■□□□ 1.01
TSKU-202ENST00000525167 KCNH4Q9UQ05 1017 aa21.35■■□□□ 1.01
TSKU-202ENST00000525167 DIXDC1Q155Q3 683 aa21.34■■□□□ 1.01
TSKU-202ENST00000525167 SIL1Q9H173 461 aa21.34■■□□□ 1.01
TSKU-202ENST00000525167 KIAA0100Q14667 2235 aaKnown RBP21.33■■□□□ 1.01
TSKU-202ENST00000525167 C17orf99Q6UX52 265 aa21.33■■□□□ 1.01
TSKU-202ENST00000525167 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.33■■□□□ 1.01
TSKU-202ENST00000525167 PDS5AQ29RF7 1337 aaKnown RBP21.32■■□□□ 1
TSKU-202ENST00000525167 TCP10Q12799 353 aa21.32■■□□□ 1
TSKU-202ENST00000525167 NFIAQ12857 509 aa21.32■■□□□ 1
TSKU-202ENST00000525167 CDCA7LQ96GN5 454 aa21.32■■□□□ 1
TSKU-202ENST00000525167 COPRSQ9NQ92 184 aa21.32■■□□□ 1
TSKU-202ENST00000525167 USP40Q9NVE5 1235 aa21.32■■□□□ 1
TSKU-202ENST00000525167 FAM198AQ9UFP1 575 aa21.32■■□□□ 1
TSKU-202ENST00000525167 PHKA1P46020 1223 aa21.31■■□□□ 1
TSKU-202ENST00000525167 SLC4A8Q2Y0W8 1093 aa21.31■■□□□ 1
TSKU-202ENST00000525167 IDI2Q9BXS1 227 aa21.31■■□□□ 1
TSKU-202ENST00000525167 ARHGAP39Q9C0H5 1083 aa21.31■■□□□ 1
TSKU-202ENST00000525167 NOB1Q9ULX3 412 aaKnown RBP21.31■■□□□ 1
TSKU-202ENST00000525167 GAKO14976 1311 aa21.3■■□□□ 1
TSKU-202ENST00000525167 PDHXO00330 501 aa21.3■■□□□ 1
TSKU-202ENST00000525167 CXCL11O14625 94 aa21.3■■□□□ 1
TSKU-202ENST00000525167 ENTPD3O75355 529 aa21.3■■□□□ 1
TSKU-202ENST00000525167 SLF2Q8IX21 1173 aa21.3■■□□□ 1
TSKU-202ENST00000525167 LRRFIP2Q9Y608 721 aaKnown RBP21.3■■□□□ 1
TSKU-202ENST00000525167 ADGRA2Q96PE1 1338 aa21.29■■□□□ 1
TSKU-202ENST00000525167 ATRNL1Q5VV63 1379 aa21.29■■□□□ 1
TSKU-202ENST00000525167 HOXD10P28358 340 aa21.29■■□□□ 1
TSKU-202ENST00000525167 HABP4Q5JVS0 413 aaKnown RBP21.29■■□□□ 1
TSKU-202ENST00000525167 CCDC102BQ68D86 513 aa21.29■■□□□ 1
TSKU-202ENST00000525167 RFX7Q2KHR2 1363 aa21.28■■□□□ 1
TSKU-202ENST00000525167 MOGSQ13724 837 aa21.28■■□□□ 1
TSKU-202ENST00000525167 FAM163AQ96GL9 167 aaPredicted RBP21.28■■□□□ 1
TSKU-202ENST00000525167 PARK7Q99497 189 aaKnown RBP21.28■■□□□ 1
TSKU-202ENST00000525167 SRRDQ9UH36 339 aa21.28■■□□□ 1
TSKU-202ENST00000525167 ZSWIM8A7E2V4 1837 aa21.27■■□□□ 1
TSKU-202ENST00000525167 DOCK2Q92608 1830 aa21.27■■□□□ 1
TSKU-202ENST00000525167 PSMC4P43686 418 aa21.27■■□□□ 1
TSKU-202ENST00000525167 MAP3K10Q02779 954 aa21.27■■□□□ 1
TSKU-202ENST00000525167 SPTY2D1Q68D10 685 aaPredicted RBP21.27■■□□□ 1
TSKU-202ENST00000525167 DZIP1Q86YF9 867 aaKnown RBP21.27■■□□□ 1
TSKU-202ENST00000525167 SH3TC2Q8TF17 1288 aa21.27■■□□□ 1
TSKU-202ENST00000525167 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
TSKU-202ENST00000525167 CPA4Q9UI42 421 aa21.27■■□□□ 1
TSKU-202ENST00000525167 PA2G4Q9UQ80 394 aaKnown RBP21.27■■□□□ 1
TSKU-202ENST00000525167 AKAP2Q9Y2D5 859 aa21.27■■□□□ 1
TSKU-202ENST00000525167 AK9Q5TCS8 1911 aa21.27■■□□□ 1
TSKU-202ENST00000525167 PHF20L1A8MW92 1017 aa21.26■□□□□ 0.99
TSKU-202ENST00000525167 GNAI3P08754 354 aa21.26■□□□□ 0.99
TSKU-202ENST00000525167 RGS3P49796 1198 aa21.26■□□□□ 0.99
TSKU-202ENST00000525167 RASGRF1Q13972 1273 aa21.26■□□□□ 0.99
TSKU-202ENST00000525167 SCYL3Q8IZE3 742 aa21.26■□□□□ 0.99
TSKU-202ENST00000525167 TRIM47Q96LD4 638 aa21.26■□□□□ 0.99
TSKU-202ENST00000525167 MEIS3Q99687 375 aa21.26■□□□□ 0.99
TSKU-202ENST00000525167 ADORA1P30542 326 aa21.25■□□□□ 0.99
TSKU-202ENST00000525167 MTX1Q13505 466 aa21.25■□□□□ 0.99
TSKU-202ENST00000525167 MVPQ14764 893 aaKnown RBP21.25■□□□□ 0.99
TSKU-202ENST00000525167 FASTKD5Q7L8L6 764 aaKnown RBP21.25■□□□□ 0.99
TSKU-202ENST00000525167 ZFPM1Q8IX07 1006 aa21.25■□□□□ 0.99
TSKU-202ENST00000525167 PICK1Q9NRD5 415 aa21.25■□□□□ 0.99
TSKU-202ENST00000525167 SLC45A1Q9Y2W3 748 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms