RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-205	ENST00000521589	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.87	□□□□□ -0.67
NPIPB3-205	ENST00000521589	GAK	O14976	1311 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	CCDC85C	A6NKD9	419 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	POLA2	Q14181	598 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	PKN2	Q16513	984 aa	Known RBP	10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	CDC42EP5	Q6NZY7	148 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	FAM151A	Q8WW52	585 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	OPTN	Q96CV9	577 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	FAM163A	Q96GL9	167 aa	Predicted RBP	10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	XAGE2	Q96GT9	111 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	MS4A4A	Q96JQ5	239 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	R3HDML	Q9H3Y0	253 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	RFX7	Q2KHR2	1363 aa		10.86	□□□□□ -0.67
NPIPB3-205	ENST00000521589	SPDYE5	A6NIY4	337 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	FKTN	O75072	461 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	RLBP1	P12271	317 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	DCAF15	Q66K64	600 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	SSH3	Q8TE77	659 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	PTPN18	Q99952	460 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	ELP3	Q9H9T3	547 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	CSAD	Q9Y600	493 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	SNCAIP	Q9Y6H5	919 aa		10.85	□□□□□ -0.67
NPIPB3-205	ENST00000521589	TNRC18	O15417	2968 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	ZBTB7B	O15156	539 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	ARID4A	P29374	1257 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	NFIA	Q12857	509 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	G3BP1	Q13283	466 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	OTUD7B	Q6GQQ9	843 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	SLF2	Q8IX21	1173 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	FTSJ3	Q8IY81	847 aa	Known RBP	10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	CNKSR2	Q8WXI2	1034 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	WRNIP1	Q96S55	665 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	IDI2	Q9BXS1	227 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	GPR108	Q9NPR9	543 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	FAM198A	Q9UFP1	575 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	ZNF112	Q9UJU3	913 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	ATRNL1	Q5VV63	1379 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	CENPF	P49454	3210 aa		10.84	□□□□□ -0.67
NPIPB3-205	ENST00000521589	GTF2A2	P52657	109 aa		10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ATP8B2	P98198	1209 aa		10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ERO1B	Q86YB8	467 aa		10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	DZIP1	Q86YF9	867 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	BRI3BP	Q8WY22	251 aa		10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ZNF341	Q9BYN7	854 aa		10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	USP40	Q9NVE5	1235 aa		10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	HMG20B	Q9P0W2	317 aa		10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	NOP58	Q9Y2X3	529 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MYH2	Q9UKX2	1941 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ENTPD3	O75355	529 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	NPM3	O75607	178 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	WDHD1	O75717	1129 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	TCP10	Q12799	353 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	CRHR2	Q13324	411 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	PPIL2	Q13356	520 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	NOL9	Q5SY16	702 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ITPRIP	Q8IWB1	547 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	SPATA5	Q8NB90	893 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ZNF384	Q8TF68	577 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	OTUD5	Q96G74	571 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	NEUROD6	Q96NK8	337 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ZCCHC17	Q9NP64	241 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ABCF2	Q9UG63	623 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	HPS5	Q9UPZ3	1129 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MROH7-TTC4	A0A0A0MT08	1334 aa		10.82	□□□□□ -0.68
NPIPB3-205	ENST00000521589	PDE4DIP	Q5VU43	2346 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	GPR75-ASB3	A0A0A6YYF3	556 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	CCL15-CCL14	A0A0B4J2E2	113 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	IRF6	O14896	467 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MAP4K4	O95819	1239 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	UQCRFS1P1	P0C7P4	283 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MCAM	P43121	646 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	RGS3	P49796	1198 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	RHBDL3	P58872	404 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MAP3K10	Q02779	954 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MECOM	Q03112	1051 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	PPAT	Q06203	517 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	CCL15	Q16663	113 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	TNNI3K	Q59H18	835 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	GORAB	Q5T7V8	394 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	PI16	Q6UXB8	463 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ERICH6	Q7L0X2	663 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	FPGT-TNNI3K	V9GXZ4	949 aa		10.81	□□□□□ -0.68
NPIPB3-205	ENST00000521589	IGSF3	O75054	1194 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	SURF6	O75683	361 aa	Known RBP	10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	CETP	P11597	493 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	INPP5B	P32019	993 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	BTD	P43251	543 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MLLT1	Q03111	559 aa	Predicted RBP	10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	SNAPC2	Q13487	334 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	MIGA2	Q7L4E1	593 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ZFPM1	Q8IX07	1006 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	FAM43A	Q8N2R8	423 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	NSUN4	Q96CB9	384 aa	Known RBP	10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	ERO1A	Q96HE7	468 aa		10.8	□□□□□ -0.68
NPIPB3-205	ENST00000521589	C1orf115	Q9H7X2	142 aa		10.8	□□□□□ -0.68

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