RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
DDX41-212ENST00000511040 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
DDX41-212ENST00000511040 TNNI2P48788 182 aa17.1■□□□□ 0.33
DDX41-212ENST00000511040 FKBP1BP68106 108 aa17.1■□□□□ 0.33
DDX41-212ENST00000511040 ZNF512BQ96KM6 892 aaPredicted RBP17.1■□□□□ 0.33
DDX41-212ENST00000511040 PIH1D3Q9NQM4 214 aaKnown RBP17.1■□□□□ 0.33
DDX41-212ENST00000511040 ANGEL1Q9UNK9 670 aaKnown RBP17.1■□□□□ 0.33
DDX41-212ENST00000511040 TCP10Q12799 353 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 SUPT20HL1Q3ZLR7 823 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 ARMC9Q7Z3E5 817 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 NSUN4Q96CB9 384 aaKnown RBP17.09■□□□□ 0.33
DDX41-212ENST00000511040 TEPSINQ96N21 525 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 DCTPP1Q9H773 170 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 GAKO14976 1311 aa17.09■□□□□ 0.33
DDX41-212ENST00000511040 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
DDX41-212ENST00000511040 FAM155AB1AL88 458 aaPredicted RBP17.08■□□□□ 0.32
DDX41-212ENST00000511040 BTDP43251 543 aa17.08■□□□□ 0.32
DDX41-212ENST00000511040 NFIAQ12857 509 aa17.08■□□□□ 0.32
DDX41-212ENST00000511040 SLF2Q8IX21 1173 aa17.08■□□□□ 0.32
DDX41-212ENST00000511040 GSTO1P78417 241 aa17.07■□□□□ 0.32
DDX41-212ENST00000511040 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
DDX41-212ENST00000511040 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
DDX41-212ENST00000511040 CCDC102AQ96A19 550 aa17.07■□□□□ 0.32
DDX41-212ENST00000511040 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
DDX41-212ENST00000511040 MYO5AQ9Y4I1 1855 aaKnown RBP17.07■□□□□ 0.32
DDX41-212ENST00000511040 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
DDX41-212ENST00000511040 MKRN3Q13064 507 aaKnown RBP17.06■□□□□ 0.32
DDX41-212ENST00000511040 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
DDX41-212ENST00000511040 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
DDX41-212ENST00000511040 FAM83AQ86UY5 434 aa17.06■□□□□ 0.32
DDX41-212ENST00000511040 ZFPM1Q8IX07 1006 aa17.06■□□□□ 0.32
DDX41-212ENST00000511040 FAM163AQ96GL9 167 aaPredicted RBP17.06■□□□□ 0.32
DDX41-212ENST00000511040 FAM198AQ9UFP1 575 aa17.06■□□□□ 0.32
DDX41-212ENST00000511040 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
DDX41-212ENST00000511040 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
DDX41-212ENST00000511040 IDH1O75874 414 aaKnown RBP17.05■□□□□ 0.32
DDX41-212ENST00000511040 LDHCP07864 332 aa17.05■□□□□ 0.32
DDX41-212ENST00000511040 SLC10A3P09131 477 aa17.05■□□□□ 0.32
DDX41-212ENST00000511040 MAP2K2P36507 400 aa17.05■□□□□ 0.32
DDX41-212ENST00000511040 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
DDX41-212ENST00000511040 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
DDX41-212ENST00000511040 DNAJC2Q99543 621 aaKnown RBP17.05■□□□□ 0.32
DDX41-212ENST00000511040 THSD7BQ9C0I4 1608 aa17.05■□□□□ 0.32
DDX41-212ENST00000511040 RGS3P49796 1198 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 KIF23Q02241 960 aaPredicted RBP17.04■□□□□ 0.32
DDX41-212ENST00000511040 NOGQ13253 232 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 PICALMQ13492 652 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 FAM151AQ8WW52 585 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 AIDAQ96BJ3 306 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 WBP1LQ9NX94 342 aa17.04■□□□□ 0.32
DDX41-212ENST00000511040 MAST2Q6P0Q8 1798 aa17.03■□□□□ 0.32
DDX41-212ENST00000511040 GOLIM4O00461 696 aa17.03■□□□□ 0.32
DDX41-212ENST00000511040 FOXN1O15353 648 aa17.03■□□□□ 0.32
DDX41-212ENST00000511040 WDHD1O75717 1129 aaPredicted RBP17.03■□□□□ 0.32
DDX41-212ENST00000511040 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
DDX41-212ENST00000511040 RHBDL3P58872 404 aa17.03■□□□□ 0.32
DDX41-212ENST00000511040 MAP2K1Q02750 393 aaPredicted RBP17.03■□□□□ 0.32
DDX41-212ENST00000511040 MIGA2Q7L4E1 593 aa17.03■□□□□ 0.32
DDX41-212ENST00000511040 EDC3Q96F86 508 aaKnown RBP17.03■□□□□ 0.32
DDX41-212ENST00000511040 DDX4Q9NQI0 724 aaKnown RBP17.03■□□□□ 0.32
DDX41-212ENST00000511040 PCNTO95613 3336 aa17.03■□□□□ 0.32
DDX41-212ENST00000511040 AK9Q5TCS8 1911 aa17.02■□□□□ 0.32
DDX41-212ENST00000511040 CYP7A1P22680 504 aa17.02■□□□□ 0.32
DDX41-212ENST00000511040 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
DDX41-212ENST00000511040 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.32
DDX41-212ENST00000511040 SH3RF3Q8TEJ3 882 aaPredicted RBP17.02■□□□□ 0.32
DDX41-212ENST00000511040 SLC10A4Q96EP9 437 aa17.02■□□□□ 0.32
DDX41-212ENST00000511040 NOL10Q9BSC4 688 aaKnown RBP17.02■□□□□ 0.32
DDX41-212ENST00000511040 AATFQ9NY61 560 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX41-212ENST00000511040 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.31
DDX41-212ENST00000511040 ATP5JP18859 108 aa17.01■□□□□ 0.31
DDX41-212ENST00000511040 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
DDX41-212ENST00000511040 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
DDX41-212ENST00000511040 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
DDX41-212ENST00000511040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX41-212ENST00000511040 IDI2Q9BXS1 227 aa17.01■□□□□ 0.31
DDX41-212ENST00000511040 TSKSQ9UJT2 592 aa17.01■□□□□ 0.31
DDX41-212ENST00000511040 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
DDX41-212ENST00000511040 ENTPD3O75355 529 aa17■□□□□ 0.31
DDX41-212ENST00000511040 DYNLL1P63167 89 aaKnown RBP17■□□□□ 0.31
DDX41-212ENST00000511040 MAP3K12Q12852 859 aa17■□□□□ 0.31
DDX41-212ENST00000511040 SH3BP5LQ7L8J4 393 aa17■□□□□ 0.31
DDX41-212ENST00000511040 MIGA1Q8NAN2 632 aa17■□□□□ 0.31
DDX41-212ENST00000511040 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
DDX41-212ENST00000511040 ELP3Q9H9T3 547 aa17■□□□□ 0.31
DDX41-212ENST00000511040 OTOFQ9HC10 1997 aa17■□□□□ 0.31
DDX41-212ENST00000511040 DDTLA6NHG4 134 aaPredicted RBP16.99■□□□□ 0.31
DDX41-212ENST00000511040 BAG3O95817 575 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 SLURP2P0DP57 97 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 MAP3K9P80192 1104 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
DDX41-212ENST00000511040 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
DDX41-212ENST00000511040 SPRYD7Q5W111 196 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 DCAF15Q66K64 600 aa16.99■□□□□ 0.31
DDX41-212ENST00000511040 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms