RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 PHKA1P46020 1223 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 MFSD6Q6ZSS7 791 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 BRMS1Q9HCU9 246 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 RBM27Q9P2N5 1060 aaKnown RBP14.67□□□□□ -0.06
LIN54-210ENST00000510877 CEMIPQ8WUJ3 1361 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 MBD4O95243 580 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 BCL2L12Q9HB09 334 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 KCNH4Q9UQ05 1017 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 KDM4AO75164 1064 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 KCTD2Q14681 263 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 CCDC178Q5BJE1 867 aa14.67□□□□□ -0.06
LIN54-210ENST00000510877 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
LIN54-210ENST00000510877 IGKV5-2P06315 115 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 MAP7D2Q96T17 732 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 PARK7Q99497 189 aaKnown RBP14.66□□□□□ -0.06
LIN54-210ENST00000510877 USP44Q9H0E7 712 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 EHMT1Q9H9B1 1298 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 GOPCQ9HD26 462 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 ADM5C9JUS6 153 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 ASNSP08243 561 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 SAFBQ15424 915 aaKnown RBP eCLIP14.66□□□□□ -0.06
LIN54-210ENST00000510877 TSKSQ9UJT2 592 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 NHSL1Q5SYE7 1610 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 NRKQ7Z2Y5 1582 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 PI4KBQ9UBF8 816 aa14.66□□□□□ -0.06
LIN54-210ENST00000510877 ERO1AQ96HE7 468 aa14.65□□□□□ -0.06
LIN54-210ENST00000510877 NBPF3Q9H094 633 aa14.65□□□□□ -0.06
LIN54-210ENST00000510877 INTS3Q68E01 1043 aaKnown RBP14.65□□□□□ -0.06
LIN54-210ENST00000510877 POLLQ9UGP5 575 aa14.65□□□□□ -0.06
LIN54-210ENST00000510877 ABCC6O95255 1503 aa14.65□□□□□ -0.06
LIN54-210ENST00000510877 FLOT1O75955 427 aa14.65□□□□□ -0.06
LIN54-210ENST00000510877 GTF2A2P52657 109 aa14.65□□□□□ -0.06
LIN54-210ENST00000510877 ABCB5Q2M3G0 1257 aa14.65□□□□□ -0.06
LIN54-210ENST00000510877 R3HCC1Q9Y3T6 440 aaKnown RBP14.65□□□□□ -0.06
LIN54-210ENST00000510877 CDCA5Q96FF9 252 aa14.64□□□□□ -0.07
LIN54-210ENST00000510877 CNPY2Q9Y2B0 182 aa14.64□□□□□ -0.07
LIN54-210ENST00000510877 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
LIN54-210ENST00000510877 ZNF853P0CG23 659 aa14.64□□□□□ -0.07
LIN54-210ENST00000510877 INHBEP58166 350 aa14.64□□□□□ -0.07
LIN54-210ENST00000510877 STRCP1A6NGW2 1772 aa14.64□□□□□ -0.07
LIN54-210ENST00000510877 ZAP70P43403 619 aa14.64□□□□□ -0.07
LIN54-210ENST00000510877 ESR2Q92731 530 aa14.64□□□□□ -0.07
LIN54-210ENST00000510877 LBHD1Q9BQE6 289 aaPredicted RBP14.64□□□□□ -0.07
LIN54-210ENST00000510877 NFKBIEO00221 500 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 TRAF5O00463 557 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 CIAO1O76071 339 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 PSMA5P28066 241 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 EVI5LQ96CN4 794 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 NSMFQ6X4W1 530 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 REM2Q8IYK8 340 aaPredicted RBP14.63□□□□□ -0.07
LIN54-210ENST00000510877 ZNF70Q9UC06 446 aaPredicted RBP14.63□□□□□ -0.07
LIN54-210ENST00000510877 FOXP4Q8IVH2 680 aaPredicted RBP14.63□□□□□ -0.07
LIN54-210ENST00000510877 TRIM22Q8IYM9 498 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 MXD3Q9BW11 206 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 SUGT1Q9Y2Z0 365 aa14.63□□□□□ -0.07
LIN54-210ENST00000510877 SPP2Q13103 211 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 GLI3P10071 1580 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 SLC9C1Q4G0N8 1177 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 MTERF4Q7Z6M4 381 aaKnown RBP14.62□□□□□ -0.07
LIN54-210ENST00000510877 NR2E3Q9Y5X4 410 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 GOLGA6L4A6NEF3 574 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 IFIT3O14879 490 aaKnown RBP14.62□□□□□ -0.07
LIN54-210ENST00000510877 HAND2P61296 217 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 FAM47CQ5HY64 1035 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 ANKRD35Q8N283 1001 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 ARMT1Q9H993 441 aa14.62□□□□□ -0.07
LIN54-210ENST00000510877 HSPA1AP0DMV8 641 aaKnown RBP14.61□□□□□ -0.07
LIN54-210ENST00000510877 HSPA1BP0DMV9 641 aaKnown RBP14.61□□□□□ -0.07
LIN54-210ENST00000510877 SLC1A4P43007 532 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 FKBP1BP68106 108 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 CATIPQ7Z7H3 387 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 ANKRD44Q8N8A2 993 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 COPRSQ9NQ92 184 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 PPP2R3BQ9Y5P8 575 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 HTRA3P83110 453 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 ICA1Q05084 483 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 ABCC12Q96J65 1359 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 USP17L5A8MUK1 530 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 SERPINB13Q9UIV8 391 aa14.61□□□□□ -0.07
LIN54-210ENST00000510877 NRDCO43847 1150 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 FKTNO75072 461 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 TFRCP02786 760 aaKnown RBP14.6□□□□□ -0.07
LIN54-210ENST00000510877 NBPF9Q3BBW0 867 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 CENPQQ7L2Z9 268 aaPredicted RBP14.6□□□□□ -0.07
LIN54-210ENST00000510877 HOMER1Q86YM7 354 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 HOMER2Q9NSB8 354 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 MFSD14CQ5VZR4 134 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 CHURC1Q8WUH1 139 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 NFAT5O94916 1531 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 ZNF541Q9H0D2 1346 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 GDF11O95390 407 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 KIF5BP33176 963 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 FCGRTP55899 365 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 KIF23Q02241 960 aaPredicted RBP14.6□□□□□ -0.07
LIN54-210ENST00000510877 RGPD8O14715 1765 aaPredicted RBP14.6□□□□□ -0.07
LIN54-210ENST00000510877 CCDC17Q96LX7 622 aa14.6□□□□□ -0.07
LIN54-210ENST00000510877 SERPINA10Q9UK55 444 aa14.59□□□□□ -0.07
LIN54-210ENST00000510877 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
LIN54-210ENST00000510877 ERO1BQ86YB8 467 aa14.59□□□□□ -0.07
LIN54-210ENST00000510877 GBP4Q96PP9 640 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms