RNA–Protein interactions for RNA: ENST00000509865.5

GPM6A-215, Transcript of glycoprotein M6A, human

TSL 4

Gene GPM6A, Length 551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPM6A-215	ENST00000509865	PPAT	Q06203	517 aa		11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	PUM3	Q15397	648 aa	Known RBP	11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	RABL6	Q3YEC7	729 aa	Predicted RBP	11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	LRRC24	Q50LG9	513 aa		11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	HABP4	Q5JVS0	413 aa	Known RBP	11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	HHIPL2	Q6UWX4	724 aa		11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	FAM43A	Q8N2R8	423 aa		11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	ZNF333	Q96JL9	665 aa		11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	ZNF341	Q9BYN7	854 aa		11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	GNL3L	Q9NVN8	582 aa	Known RBP	11.29	□□□□□ -0.6
GPM6A-215	ENST00000509865	IRF6	O14896	467 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	SLC5A1	P13866	664 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	CACNB3	P54284	484 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	PPIL2	Q13356	520 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	LPIN2	Q92539	896 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	KAZALD1	Q96I82	304 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	HDAC5	Q9UQL6	1122 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	PTCH2	Q9Y6C5	1203 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	KIF16B	Q96L93	1317 aa		11.28	□□□□□ -0.6
GPM6A-215	ENST00000509865	MYC	P01106	439 aa	Predicted RBP	11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	LACTB	P83111	547 aa	Predicted RBP	11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	MIGA2	Q7L4E1	593 aa		11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	CDAN1	Q8IWY9	1227 aa		11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	NKX2-3	Q8TAU0	364 aa		11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	FAM151A	Q8WW52	585 aa		11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	SNCAIP	Q9Y6H5	919 aa		11.27	□□□□□ -0.61
GPM6A-215	ENST00000509865	BTBD19	C9JJ37	291 aa		11.26	□□□□□ -0.61
GPM6A-215	ENST00000509865	FMNL1	O95466	1100 aa	Predicted RBP	11.26	□□□□□ -0.61
GPM6A-215	ENST00000509865	GRIK5	Q16478	980 aa		11.26	□□□□□ -0.61
GPM6A-215	ENST00000509865	ANKRD23	Q86SG2	305 aa		11.26	□□□□□ -0.61
GPM6A-215	ENST00000509865	RASEF	Q8IZ41	740 aa		11.26	□□□□□ -0.61
GPM6A-215	ENST00000509865	MRPL50	Q8N5N7	158 aa	Known RBP	11.26	□□□□□ -0.61
GPM6A-215	ENST00000509865		E9PSI1	815 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	EYA2	O00167	538 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	PDHX	O00330	501 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	ANKRD44	Q8N8A2	993 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	VGLL2	Q8N8G2	317 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	KLHDC4	Q8TBB5	520 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	RAET1E	Q8TD07	263 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	SH3TC2	Q8TF17	1288 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	TRIM47	Q96LD4	638 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	CEP126	Q9P2H0	1117 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	BIN2	Q9UBW5	565 aa	Predicted RBP	11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	MYH3	P11055	1940 aa		11.25	□□□□□ -0.61
GPM6A-215	ENST00000509865	LDHB	P07195	334 aa	Known RBP	11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	PSMC4	P43686	418 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	UBXN2A	P68543	259 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	TCP10	Q12799	353 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	C17orf99	Q6UX52	265 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	SLF2	Q8IX21	1173 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	ZGPAT	Q8N5A5	531 aa	Known RBP	11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	DPF3	Q92784	378 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	PARK7	Q99497	189 aa	Known RBP	11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	USP44	Q9H0E7	712 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	USP40	Q9NVE5	1235 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	CPA4	Q9UI42	421 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	PDE4DIP	Q5VU43	2346 aa		11.24	□□□□□ -0.61
GPM6A-215	ENST00000509865	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	CXCL11	O14625	94 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	SEMA3E	O15041	775 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	FGFR2	P21802	821 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	FASTKD5	Q7L8L6	764 aa	Known RBP	11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	ARHGAP39	Q9C0H5	1083 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	PICK1	Q9NRD5	415 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	SRRD	Q9UH36	339 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	DENND2A	Q9ULE3	1009 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	SPEF2	Q9C093	1822 aa		11.23	□□□□□ -0.61
GPM6A-215	ENST00000509865	ECM2	O94769	699 aa	Predicted RBP	11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	UBTFL1	P0CB47	393 aa	Predicted RBP	11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	INPP5B	P32019	993 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	GRK4	P32298	578 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	FCGRT	P55899	365 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	CAP1	Q01518	475 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	ATP2B3	Q16720	1220 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	ALDH1L2	Q3SY69	923 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	CDC42EP5	Q6NZY7	148 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	SSH1	Q8WYL5	1049 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	HTATIP2	Q9BUP3	242 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	ZNF112	Q9UJU3	913 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	KCNH4	Q9UQ05	1017 aa		11.22	□□□□□ -0.61
GPM6A-215	ENST00000509865	MYPN	Q86TC9	1320 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	CIAO1	O76071	339 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	CAPN2	P17655	700 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	OSBP	P22059	807 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	IL15	P40933	162 aa	Predicted RBP	11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	DIXDC1	Q155Q3	683 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	NOL9	Q5SY16	702 aa	Known RBP	11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	SIL1	Q9H173	461 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	SMC4	Q9NTJ3	1288 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	COLQ	Q9Y215	455 aa	Predicted RBP	11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	DAGLA	Q9Y4D2	1042 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	LRRFIP2	Q9Y608	721 aa	Known RBP	11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	ZHX2	Q9Y6X8	837 aa		11.21	□□□□□ -0.61
GPM6A-215	ENST00000509865	ENTPD3	O75355	529 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms