RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 ELP3Q9H9T3 547 aa28.42■■■□□ 2.14
RETREG1-204ENST00000509048 IGF2BP3O00425 579 aaKnown RBP eCLIP28.41■■■□□ 2.14
RETREG1-204ENST00000509048 RLBP1P12271 317 aa28.41■■■□□ 2.14
RETREG1-204ENST00000509048 VGLL4Q14135 290 aa28.41■■■□□ 2.14
RETREG1-204ENST00000509048 POLA2Q14181 598 aa28.41■■■□□ 2.14
RETREG1-204ENST00000509048 OPTNQ96CV9 577 aa28.41■■■□□ 2.14
RETREG1-204ENST00000509048 HOOK2Q96ED9 719 aa28.41■■■□□ 2.14
RETREG1-204ENST00000509048 R3HDMLQ9H3Y0 253 aa28.41■■■□□ 2.14
RETREG1-204ENST00000509048 TESPA1A2RU30 521 aaPredicted RBP28.4■■■□□ 2.14
RETREG1-204ENST00000509048 G3BP1Q13283 466 aaKnown RBP eCLIP28.4■■■□□ 2.14
RETREG1-204ENST00000509048 FAM151AQ8WW52 585 aa28.4■■■□□ 2.14
RETREG1-204ENST00000509048 SSH3Q8TE77 659 aa28.39■■■□□ 2.14
RETREG1-204ENST00000509048 CSADQ9Y600 493 aa28.39■■■□□ 2.14
RETREG1-204ENST00000509048 ZBTB7BO15156 539 aaPredicted RBP28.38■■■□□ 2.13
RETREG1-204ENST00000509048 ATP8B2P98198 1209 aa28.38■■■□□ 2.13
RETREG1-204ENST00000509048 NEUROD6Q96NK8 337 aa28.38■■■□□ 2.13
RETREG1-204ENST00000509048 NFIAQ12857 509 aa28.37■■■□□ 2.13
RETREG1-204ENST00000509048 ITPRIPQ8IWB1 547 aa28.37■■■□□ 2.13
RETREG1-204ENST00000509048 CNKSR2Q8WXI2 1034 aa28.37■■■□□ 2.13
RETREG1-204ENST00000509048 MS4A4AQ96JQ5 239 aa28.37■■■□□ 2.13
RETREG1-204ENST00000509048 GAKO14976 1311 aa28.37■■■□□ 2.13
RETREG1-204ENST00000509048 MYH2Q9UKX2 1941 aa28.36■■■□□ 2.13
RETREG1-204ENST00000509048 DCAF15Q66K64 600 aa28.36■■■□□ 2.13
RETREG1-204ENST00000509048 FAM163AQ96GL9 167 aaPredicted RBP28.36■■■□□ 2.13
RETREG1-204ENST00000509048 WRNIP1Q96S55 665 aa28.36■■■□□ 2.13
RETREG1-204ENST00000509048 PTPN18Q99952 460 aa28.36■■■□□ 2.13
RETREG1-204ENST00000509048 USP40Q9NVE5 1235 aa28.36■■■□□ 2.13
RETREG1-204ENST00000509048 FAM198AQ9UFP1 575 aa28.36■■■□□ 2.13
RETREG1-204ENST00000509048 ABCF2Q9UG63 623 aa28.36■■■□□ 2.13
RETREG1-204ENST00000509048 FKTNO75072 461 aa28.35■■■□□ 2.13
RETREG1-204ENST00000509048 ARID4AP29374 1257 aaPredicted RBP28.35■■■□□ 2.13
RETREG1-204ENST00000509048 PKN2Q16513 984 aaKnown RBP28.35■■■□□ 2.13
RETREG1-204ENST00000509048 SPTY2D1Q68D10 685 aaPredicted RBP28.35■■■□□ 2.13
RETREG1-204ENST00000509048 OTUD7BQ6GQQ9 843 aa28.35■■■□□ 2.13
RETREG1-204ENST00000509048 DZIP1Q86YF9 867 aaKnown RBP28.35■■■□□ 2.13
RETREG1-204ENST00000509048 C1orf115Q9H7X2 142 aa28.35■■■□□ 2.13
RETREG1-204ENST00000509048 HMG20BQ9P0W2 317 aa28.35■■■□□ 2.13
RETREG1-204ENST00000509048 SNCAIPQ9Y6H5 919 aa28.35■■■□□ 2.13
RETREG1-204ENST00000509048 HTTP42858 3142 aa28.35■■■□□ 2.13
RETREG1-204ENST00000509048 SPDYE5A6NIY4 337 aa28.34■■■□□ 2.13
RETREG1-204ENST00000509048 RGS19P49795 217 aa28.34■■■□□ 2.13
RETREG1-204ENST00000509048 TCP10Q12799 353 aa28.34■■■□□ 2.13
RETREG1-204ENST00000509048 GPR108Q9NPR9 543 aa28.34■■■□□ 2.13
RETREG1-204ENST00000509048 GORABQ5T7V8 394 aa28.33■■■□□ 2.13
RETREG1-204ENST00000509048 SLF2Q8IX21 1173 aa28.33■■■□□ 2.13
RETREG1-204ENST00000509048 ZKSCAN4Q969J2 545 aaPredicted RBP28.33■■■□□ 2.13
RETREG1-204ENST00000509048 OTUD5Q96G74 571 aa28.33■■■□□ 2.13
RETREG1-204ENST00000509048 IDI2Q9BXS1 227 aa28.33■■■□□ 2.13
RETREG1-204ENST00000509048 ZNF341Q9BYN7 854 aa28.33■■■□□ 2.13
RETREG1-204ENST00000509048 RFX7Q2KHR2 1363 aa28.33■■■□□ 2.13
RETREG1-204ENST00000509048 GTF2A2P52657 109 aa28.32■■■□□ 2.12
RETREG1-204ENST00000509048 SPATA5Q8NB90 893 aa28.32■■■□□ 2.12
RETREG1-204ENST00000509048 PI16Q6UXB8 463 aa28.31■■■□□ 2.12
RETREG1-204ENST00000509048 MIGA2Q7L4E1 593 aa28.31■■■□□ 2.12
RETREG1-204ENST00000509048 ERO1BQ86YB8 467 aa28.31■■■□□ 2.12
RETREG1-204ENST00000509048 ZNF384Q8TF68 577 aa28.31■■■□□ 2.12
RETREG1-204ENST00000509048 BRI3BPQ8WY22 251 aa28.31■■■□□ 2.12
RETREG1-204ENST00000509048 NOP58Q9Y2X3 529 aaKnown RBP28.31■■■□□ 2.12
RETREG1-204ENST00000509048 MROH7-TTC4A0A0A0MT08 1334 aa28.3■■■□□ 2.12
RETREG1-204ENST00000509048 MECOMQ03112 1051 aa28.3■■■□□ 2.12
RETREG1-204ENST00000509048 CRHR2Q13324 411 aa28.3■■■□□ 2.12
RETREG1-204ENST00000509048 ERICH6Q7L0X2 663 aa28.3■■■□□ 2.12
RETREG1-204ENST00000509048 ZNF112Q9UJU3 913 aa28.3■■■□□ 2.12
RETREG1-204ENST00000509048 SURF6O75683 361 aaKnown RBP28.29■■■□□ 2.12
RETREG1-204ENST00000509048 MCAMP43121 646 aa28.29■■■□□ 2.12
RETREG1-204ENST00000509048 TNNI3KQ59H18 835 aa28.29■■■□□ 2.12
RETREG1-204ENST00000509048 ZFPM1Q8IX07 1006 aa28.29■■■□□ 2.12
RETREG1-204ENST00000509048 FPGT-TNNI3KV9GXZ4 949 aa28.29■■■□□ 2.12
RETREG1-204ENST00000509048 ATRNL1Q5VV63 1379 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 CCL15-CCL14A0A0B4J2E2 113 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 ENTPD3O75355 529 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 UQCRFS1P1P0C7P4 283 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 BTDP43251 543 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 RGS3P49796 1198 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 OS9Q13438 667 aaPredicted RBP28.28■■■□□ 2.12
RETREG1-204ENST00000509048 CCL15Q16663 113 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 HPS5Q9UPZ3 1129 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 AK9Q5TCS8 1911 aa28.28■■■□□ 2.12
RETREG1-204ENST00000509048 GPR75-ASB3A0A0A6YYF3 556 aa28.27■■■□□ 2.12
RETREG1-204ENST00000509048 WDHD1O75717 1129 aaPredicted RBP28.27■■■□□ 2.12
RETREG1-204ENST00000509048 INPP5BP32019 993 aa28.27■■■□□ 2.12
RETREG1-204ENST00000509048 PPIL2Q13356 520 aa28.27■■■□□ 2.12
RETREG1-204ENST00000509048 PANK1Q8TE04 598 aa28.27■■■□□ 2.12
RETREG1-204ENST00000509048 NSUN4Q96CB9 384 aaKnown RBP28.27■■■□□ 2.12
RETREG1-204ENST00000509048 IRF6O14896 467 aa28.26■■■□□ 2.11
RETREG1-204ENST00000509048 CEP85Q6P2H3 762 aa28.26■■■□□ 2.11
RETREG1-204ENST00000509048 TBC1D9Q6ZT07 1266 aa28.26■■■□□ 2.11
RETREG1-204ENST00000509048 CENPFP49454 3210 aa28.26■■■□□ 2.11
RETREG1-204ENST00000509048 PPATQ06203 517 aa28.25■■■□□ 2.11
RETREG1-204ENST00000509048 FBXO46Q6PJ61 603 aaPredicted RBP28.25■■■□□ 2.11
RETREG1-204ENST00000509048 DBNDD2Q9BQY9 259 aa28.25■■■□□ 2.11
RETREG1-204ENST00000509048 DDX4Q9NQI0 724 aaKnown RBP28.25■■■□□ 2.11
RETREG1-204ENST00000509048 CETPP11597 493 aa28.24■■■□□ 2.11
RETREG1-204ENST00000509048 RHBDL3P58872 404 aa28.24■■■□□ 2.11
RETREG1-204ENST00000509048 GSTO1P78417 241 aa28.24■■■□□ 2.11
RETREG1-204ENST00000509048 SNAPC2Q13487 334 aa28.24■■■□□ 2.11
RETREG1-204ENST00000509048 NOL9Q5SY16 702 aaKnown RBP28.24■■■□□ 2.11
RETREG1-204ENST00000509048 SH3BP5LQ7L8J4 393 aa28.24■■■□□ 2.11
RETREG1-204ENST00000509048 FAM43AQ8N2R8 423 aa28.24■■■□□ 2.11
RETREG1-204ENST00000509048 DOCK2Q92608 1830 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms