RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 CSRNP1Q96S65 589 aa29.93■■■□□ 2.38
PROM1-209ENST00000508940 DBNDD2Q9BQY9 259 aa29.93■■■□□ 2.38
PROM1-209ENST00000508940 EXOC6BQ9Y2D4 811 aa29.93■■■□□ 2.38
PROM1-209ENST00000508940 SSC5DA1L4H1 1573 aa29.93■■■□□ 2.38
PROM1-209ENST00000508940 UNCXA6NJT0 531 aa29.92■■■□□ 2.38
PROM1-209ENST00000508940 USP2O75604 605 aaPredicted RBP29.92■■■□□ 2.38
PROM1-209ENST00000508940 USP40Q9NVE5 1235 aa29.92■■■□□ 2.38
PROM1-209ENST00000508940 MKRN3Q13064 507 aaKnown RBP29.91■■■□□ 2.38
PROM1-209ENST00000508940 C20orf194Q5TEA3 1177 aa29.91■■■□□ 2.38
PROM1-209ENST00000508940 CDC42EP5Q6NZY7 148 aa29.91■■■□□ 2.38
PROM1-209ENST00000508940 HOOK2Q96ED9 719 aa29.91■■■□□ 2.38
PROM1-209ENST00000508940 MCAMP43121 646 aa29.9■■■□□ 2.38
PROM1-209ENST00000508940 PI16Q6UXB8 463 aa29.9■■■□□ 2.38
PROM1-209ENST00000508940 ANKRD13AQ8IZ07 590 aa29.9■■■□□ 2.38
PROM1-209ENST00000508940 IFFO2Q5TF58 517 aa29.89■■■□□ 2.38
PROM1-209ENST00000508940 CCDC8Q9H0W5 538 aaPredicted RBP29.89■■■□□ 2.38
PROM1-209ENST00000508940 GSTO1P78417 241 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 SPRYD7Q5W111 196 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 TBC1D9Q6ZT07 1266 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 CDAN1Q8IWY9 1227 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 RNF186Q9NXI6 227 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 SAGE1Q9NXZ1 904 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 RAI14Q9P0K7 980 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 LRP2BPQ9P2M1 347 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 MYH2Q9UKX2 1941 aa29.88■■■□□ 2.37
PROM1-209ENST00000508940 TRPA1O75762 1119 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 LDHCP07864 332 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 MECOMQ03112 1051 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 TCP10Q12799 353 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 FAM151AQ8WW52 585 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 EAF2Q96CJ1 260 aaPredicted RBP29.87■■■□□ 2.37
PROM1-209ENST00000508940 FAM163AQ96GL9 167 aaPredicted RBP29.87■■■□□ 2.37
PROM1-209ENST00000508940 CLMNQ96JQ2 1002 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 SNRKQ9NRH2 765 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 GAKO14976 1311 aa29.87■■■□□ 2.37
PROM1-209ENST00000508940 AKAP11Q9UKA4 1901 aa29.86■■■□□ 2.37
PROM1-209ENST00000508940 SREBF2Q12772 1141 aa29.86■■■□□ 2.37
PROM1-209ENST00000508940 DBNLQ9UJU6 430 aaKnown RBP29.86■■■□□ 2.37
PROM1-209ENST00000508940 DCAF15Q66K64 600 aa29.85■■■□□ 2.37
PROM1-209ENST00000508940 AACSQ86V21 672 aa29.85■■■□□ 2.37
PROM1-209ENST00000508940 RHPN1Q8TCX5 695 aa29.85■■■□□ 2.37
PROM1-209ENST00000508940 ZNF512BQ96KM6 892 aaPredicted RBP29.85■■■□□ 2.37
PROM1-209ENST00000508940 APBB1O00213 710 aa29.84■■■□□ 2.37
PROM1-209ENST00000508940 MAP3K9P80192 1104 aa29.84■■■□□ 2.37
PROM1-209ENST00000508940 SIRT2Q8IXJ6 389 aa29.84■■■□□ 2.37
PROM1-209ENST00000508940 WNK4Q96J92 1243 aa29.84■■■□□ 2.37
PROM1-209ENST00000508940 MROH7-TTC4A0A0A0MT08 1334 aa29.84■■■□□ 2.37
PROM1-209ENST00000508940 ZBTB48P10074 688 aaPredicted RBP29.83■■■□□ 2.37
PROM1-209ENST00000508940 BTDP43251 543 aa29.83■■■□□ 2.37
PROM1-209ENST00000508940 TM4SF4P48230 202 aa29.83■■■□□ 2.37
PROM1-209ENST00000508940 KIF1BPQ96EK5 621 aa29.83■■■□□ 2.37
PROM1-209ENST00000508940 IL1RAPL2Q9NP60 686 aa29.83■■■□□ 2.37
PROM1-209ENST00000508940 TLR7Q9NYK1 1049 aaKnown RBP29.83■■■□□ 2.37
PROM1-209ENST00000508940 CSADQ9Y600 493 aa29.83■■■□□ 2.37
PROM1-209ENST00000508940 RPAP1Q9BWH6 1393 aaPredicted RBP29.82■■■□□ 2.36
PROM1-209ENST00000508940 RAB11FIP3O75154 756 aa29.82■■■□□ 2.36
PROM1-209ENST00000508940 NFIAQ12857 509 aa29.82■■■□□ 2.36
PROM1-209ENST00000508940 CLASRPQ8N2M8 674 aaKnown RBP29.82■■■□□ 2.36
PROM1-209ENST00000508940 NSUN4Q96CB9 384 aaKnown RBP29.82■■■□□ 2.36
PROM1-209ENST00000508940 AK9Q5TCS8 1911 aa29.81■■■□□ 2.36
PROM1-209ENST00000508940 MANSC4A6NHS7 340 aaPredicted RBP29.81■■■□□ 2.36
PROM1-209ENST00000508940 ELP3Q9H9T3 547 aa29.81■■■□□ 2.36
PROM1-209ENST00000508940 FAM198AQ9UFP1 575 aa29.81■■■□□ 2.36
PROM1-209ENST00000508940 GPR75-ASB3A0A0A6YYF3 556 aa29.8■■■□□ 2.36
PROM1-209ENST00000508940 INHBEP58166 350 aa29.8■■■□□ 2.36
PROM1-209ENST00000508940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.8■■■□□ 2.36
PROM1-209ENST00000508940 NOL10Q9BSC4 688 aaKnown RBP29.8■■■□□ 2.36
PROM1-209ENST00000508940 IDI2Q9BXS1 227 aa29.8■■■□□ 2.36
PROM1-209ENST00000508940 ENTPD3O75355 529 aa29.79■■■□□ 2.36
PROM1-209ENST00000508940 ZAP70P43403 619 aa29.79■■■□□ 2.36
PROM1-209ENST00000508940 RGS3P49796 1198 aa29.79■■■□□ 2.36
PROM1-209ENST00000508940 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.79■■■□□ 2.36
PROM1-209ENST00000508940 MIGA2Q7L4E1 593 aa29.79■■■□□ 2.36
PROM1-209ENST00000508940 ZNF341Q9BYN7 854 aa29.79■■■□□ 2.36
PROM1-209ENST00000508940 BCL11AQ9H165 835 aa29.79■■■□□ 2.36
PROM1-209ENST00000508940 CYP2E1P05181 493 aaPredicted RBP29.78■■■□□ 2.36
PROM1-209ENST00000508940 VGLL4Q14135 290 aa29.78■■■□□ 2.36
PROM1-209ENST00000508940 NAA16Q6N069 864 aaPredicted RBP29.78■■■□□ 2.36
PROM1-209ENST00000508940 ZSCAN29Q8IWY8 852 aaPredicted RBP29.78■■■□□ 2.36
PROM1-209ENST00000508940 ZNF384Q8TF68 577 aa29.78■■■□□ 2.36
PROM1-209ENST00000508940 OPTNQ96CV9 577 aa29.78■■■□□ 2.36
PROM1-209ENST00000508940 WRNIP1Q96S55 665 aa29.78■■■□□ 2.36
PROM1-209ENST00000508940 MAP4K4O95819 1239 aaPredicted RBP29.77■■■□□ 2.36
PROM1-209ENST00000508940 IFIT2P09913 472 aaKnown RBP29.77■■■□□ 2.36
PROM1-209ENST00000508940 IGSF3O75054 1194 aa29.76■■■□□ 2.35
PROM1-209ENST00000508940 PICALMQ13492 652 aa29.76■■■□□ 2.35
PROM1-209ENST00000508940 ZFPM1Q8IX07 1006 aa29.75■■■□□ 2.35
PROM1-209ENST00000508940 CASP8AP2Q9UKL3 1982 aa29.75■■■□□ 2.35
PROM1-209ENST00000508940 WDHD1O75717 1129 aaPredicted RBP29.74■■■□□ 2.35
PROM1-209ENST00000508940 BAG3O95817 575 aa29.74■■■□□ 2.35
PROM1-209ENST00000508940 ALDH1A1P00352 501 aa29.74■■■□□ 2.35
PROM1-209ENST00000508940 GJA5P36382 358 aa29.74■■■□□ 2.35
PROM1-209ENST00000508940 RRP1P56182 461 aaKnown RBP29.74■■■□□ 2.35
PROM1-209ENST00000508940 PIH1D3Q9NQM4 214 aaKnown RBP29.74■■■□□ 2.35
PROM1-209ENST00000508940 OTOFQ9HC10 1997 aa29.73■■■□□ 2.35
PROM1-209ENST00000508940 TBC1D8O95759 1140 aa29.73■■■□□ 2.35
PROM1-209ENST00000508940 RHBDL3P58872 404 aa29.73■■■□□ 2.35
PROM1-209ENST00000508940 OTUD7BQ6GQQ9 843 aa29.73■■■□□ 2.35
PROM1-209ENST00000508940 ZKSCAN4Q969J2 545 aaPredicted RBP29.73■■■□□ 2.35
PROM1-209ENST00000508940 IFNL1Q8IU54 200 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms