RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 DZIP1Q86YF9 867 aaKnown RBP20.29■□□□□ 0.84
DDR1-263ENST00000508317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDR1-263ENST00000508317 FAM151AQ8WW52 585 aa20.29■□□□□ 0.84
DDR1-263ENST00000508317 CENPFP49454 3210 aa20.29■□□□□ 0.84
DDR1-263ENST00000508317 SZT2Q5T011 3432 aa20.28■□□□□ 0.84
DDR1-263ENST00000508317 SPDYE5A6NIY4 337 aa20.28■□□□□ 0.84
DDR1-263ENST00000508317 GRIK5Q16478 980 aa20.28■□□□□ 0.84
DDR1-263ENST00000508317 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
DDR1-263ENST00000508317 TRMT2AQ8IZ69 625 aaKnown RBP20.28■□□□□ 0.84
DDR1-263ENST00000508317 CD99L2Q8TCZ2 262 aa20.28■□□□□ 0.84
DDR1-263ENST00000508317 R3HDMLQ9H3Y0 253 aa20.28■□□□□ 0.84
DDR1-263ENST00000508317 SRGAP3O43295 1099 aa20.27■□□□□ 0.84
DDR1-263ENST00000508317 RARSP54136 660 aaKnown RBP20.27■□□□□ 0.84
DDR1-263ENST00000508317 MVPQ14764 893 aaKnown RBP20.27■□□□□ 0.84
DDR1-263ENST00000508317 ATG9AQ7Z3C6 839 aa20.27■□□□□ 0.84
DDR1-263ENST00000508317 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
DDR1-263ENST00000508317 TMEM106CQ9BVX2 250 aa20.27■□□□□ 0.84
DDR1-263ENST00000508317 ZCCHC17Q9NP64 241 aaKnown RBP20.27■□□□□ 0.84
DDR1-263ENST00000508317 USP40Q9NVE5 1235 aa20.27■□□□□ 0.84
DDR1-263ENST00000508317 GJA5P36382 358 aa20.26■□□□□ 0.83
DDR1-263ENST00000508317 TCP10Q12799 353 aa20.26■□□□□ 0.83
DDR1-263ENST00000508317 ZSCAN29Q8IWY8 852 aaPredicted RBP20.26■□□□□ 0.83
DDR1-263ENST00000508317 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
DDR1-263ENST00000508317 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
DDR1-263ENST00000508317 ABCF2Q9UG63 623 aa20.26■□□□□ 0.83
DDR1-263ENST00000508317 ZNF646O15015 1829 aaPredicted RBP20.25■□□□□ 0.83
DDR1-263ENST00000508317 RPAP1Q9BWH6 1393 aaPredicted RBP20.25■□□□□ 0.83
DDR1-263ENST00000508317 PPATQ06203 517 aa20.25■□□□□ 0.83
DDR1-263ENST00000508317 PPIL2Q13356 520 aa20.25■□□□□ 0.83
DDR1-263ENST00000508317 MIGA2Q7L4E1 593 aa20.25■□□□□ 0.83
DDR1-263ENST00000508317 BRI3BPQ8WY22 251 aa20.25■□□□□ 0.83
DDR1-263ENST00000508317 PTPN22Q9Y2R2 807 aa20.25■□□□□ 0.83
DDR1-263ENST00000508317 DAGLAQ9Y4D2 1042 aa20.25■□□□□ 0.83
DDR1-263ENST00000508317 SALL1Q9NSC2 1324 aa20.25■□□□□ 0.83
DDR1-263ENST00000508317 G3BP1Q13283 466 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDR1-263ENST00000508317 DIXDC1Q155Q3 683 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 CCDC102BQ68D86 513 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 CDAN1Q8IWY9 1227 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 ZKSCAN4Q969J2 545 aaPredicted RBP20.24■□□□□ 0.83
DDR1-263ENST00000508317 MS4A4AQ96JQ5 239 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 NEUROD6Q96NK8 337 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 MEIS3Q99687 375 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 PTPN18Q99952 460 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 PICK1Q9NRD5 415 aa20.24■□□□□ 0.83
DDR1-263ENST00000508317 GNAI2P04899 355 aa20.23■□□□□ 0.83
DDR1-263ENST00000508317 PRDX5P30044 214 aa20.23■□□□□ 0.83
DDR1-263ENST00000508317 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
DDR1-263ENST00000508317 GSTO1P78417 241 aa20.23■□□□□ 0.83
DDR1-263ENST00000508317 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
DDR1-263ENST00000508317 GCC1Q96CN9 775 aa20.23■□□□□ 0.83
DDR1-263ENST00000508317 PA2G4Q9UQ80 394 aaKnown RBP20.23■□□□□ 0.83
DDR1-263ENST00000508317 GNRH1P01148 92 aa20.22■□□□□ 0.83
DDR1-263ENST00000508317 PHKA1P46020 1223 aa20.22■□□□□ 0.83
DDR1-263ENST00000508317 SLC9C1Q4G0N8 1177 aa20.22■□□□□ 0.83
DDR1-263ENST00000508317 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
DDR1-263ENST00000508317 NOL10Q9BSC4 688 aaKnown RBP20.22■□□□□ 0.83
DDR1-263ENST00000508317 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
DDR1-263ENST00000508317 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
DDR1-263ENST00000508317 ECM29Q5VYK3 1845 aa20.21■□□□□ 0.83
DDR1-263ENST00000508317 IRF6O14896 467 aa20.21■□□□□ 0.83
DDR1-263ENST00000508317 LDHCP07864 332 aa20.21■□□□□ 0.83
DDR1-263ENST00000508317 HOXD10P28358 340 aa20.21■□□□□ 0.83
DDR1-263ENST00000508317 OS9Q13438 667 aaPredicted RBP20.21■□□□□ 0.83
DDR1-263ENST00000508317 ERICH6Q7L0X2 663 aa20.21■□□□□ 0.83
DDR1-263ENST00000508317 POTEFA5A3E0 1075 aa20.2■□□□□ 0.82
DDR1-263ENST00000508317 TLR2O60603 784 aa20.2■□□□□ 0.82
DDR1-263ENST00000508317 ENTPD3O75355 529 aa20.2■□□□□ 0.82
DDR1-263ENST00000508317 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
DDR1-263ENST00000508317 FAM43AQ8N2R8 423 aa20.2■□□□□ 0.82
DDR1-263ENST00000508317 A0A1B0GUL7 405 aa20.19■□□□□ 0.82
DDR1-263ENST00000508317 PRMT2P55345 433 aa20.19■□□□□ 0.82
DDR1-263ENST00000508317 TIMM10P62072 90 aa20.19■□□□□ 0.82
DDR1-263ENST00000508317 TFCP2Q12800 502 aa20.19■□□□□ 0.82
DDR1-263ENST00000508317 SLC4A8Q2Y0W8 1093 aa20.19■□□□□ 0.82
DDR1-263ENST00000508317 FTSJ3Q8IY81 847 aaKnown RBP20.19■□□□□ 0.82
DDR1-263ENST00000508317 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.19■□□□□ 0.82
DDR1-263ENST00000508317 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
DDR1-263ENST00000508317 PDS5AQ29RF7 1337 aaKnown RBP20.19■□□□□ 0.82
DDR1-263ENST00000508317 BTBD19C9JJ37 291 aa20.18■□□□□ 0.82
DDR1-263ENST00000508317 ZKSCAN2Q63HK3 967 aa20.18■□□□□ 0.82
DDR1-263ENST00000508317 ANKRD23Q86SG2 305 aa20.18■□□□□ 0.82
DDR1-263ENST00000508317 ZBTB22O15209 634 aa20.17■□□□□ 0.82
DDR1-263ENST00000508317 MAP4K4O95819 1239 aaPredicted RBP20.17■□□□□ 0.82
DDR1-263ENST00000508317 UQCRFS1P1P0C7P4 283 aa20.17■□□□□ 0.82
DDR1-263ENST00000508317 ADORA1P30542 326 aa20.17■□□□□ 0.82
DDR1-263ENST00000508317 INPP5BP32019 993 aa20.17■□□□□ 0.82
DDR1-263ENST00000508317 RGS3P49796 1198 aa20.17■□□□□ 0.82
DDR1-263ENST00000508317 MTX1Q13505 466 aa20.17■□□□□ 0.82
DDR1-263ENST00000508317 RASGRF1Q13972 1273 aa20.17■□□□□ 0.82
DDR1-263ENST00000508317 FASTKD5Q7L8L6 764 aaKnown RBP20.17■□□□□ 0.82
DDR1-263ENST00000508317 PARK7Q99497 189 aaKnown RBP20.17■□□□□ 0.82
DDR1-263ENST00000508317 PDHXO00330 501 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 CXCL11O14625 94 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 NFIAQ12857 509 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 PICALMQ13492 652 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 NOL9Q5SY16 702 aaKnown RBP20.16■□□□□ 0.82
DDR1-263ENST00000508317 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 ARMC5Q96C12 935 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 IDI2Q9BXS1 227 aa20.16■□□□□ 0.82
DDR1-263ENST00000508317 RAI14Q9P0K7 980 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms