RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 CYP2E1P05181 493 aaPredicted RBP23.57■■□□□ 1.36
LMNA-221ENST00000506981 CACNB3P54284 484 aa23.57■■□□□ 1.36
LMNA-221ENST00000506981 FKBP1CQ5VVH2 108 aa23.57■■□□□ 1.36
LMNA-221ENST00000506981 CYP4F22Q6NT55 531 aa23.57■■□□□ 1.36
LMNA-221ENST00000506981 JMYQ8N9B5 988 aa23.57■■□□□ 1.36
LMNA-221ENST00000506981 NOL10Q9BSC4 688 aaKnown RBP23.57■■□□□ 1.36
LMNA-221ENST00000506981 USP40Q9NVE5 1235 aa23.57■■□□□ 1.36
LMNA-221ENST00000506981 CDK5RAP2Q96SN8 1893 aa23.57■■□□□ 1.36
LMNA-221ENST00000506981 OTOFQ9HC10 1997 aa23.56■■□□□ 1.36
LMNA-221ENST00000506981 PPP1R12BO60237 982 aaPredicted RBP23.56■■□□□ 1.36
LMNA-221ENST00000506981 CDC42EP5Q6NZY7 148 aa23.56■■□□□ 1.36
LMNA-221ENST00000506981 EXOC6Q8TAG9 804 aa23.56■■□□□ 1.36
LMNA-221ENST00000506981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.56■■□□□ 1.36
LMNA-221ENST00000506981 NSUN4Q96CB9 384 aaKnown RBP23.56■■□□□ 1.36
LMNA-221ENST00000506981 FAM163AQ96GL9 167 aaPredicted RBP23.56■■□□□ 1.36
LMNA-221ENST00000506981 FOCADQ5VW36 1801 aa23.55■■□□□ 1.36
LMNA-221ENST00000506981 BTDP43251 543 aa23.55■■□□□ 1.36
LMNA-221ENST00000506981 PRKG1Q13976 671 aa23.55■■□□□ 1.36
LMNA-221ENST00000506981 NAA16Q6N069 864 aaPredicted RBP23.55■■□□□ 1.36
LMNA-221ENST00000506981 RGMBQ6NW40 437 aa23.55■■□□□ 1.36
LMNA-221ENST00000506981 FAM83AQ86UY5 434 aa23.55■■□□□ 1.36
LMNA-221ENST00000506981 GPATCH3Q96I76 525 aa23.55■■□□□ 1.36
LMNA-221ENST00000506981 IDH1O75874 414 aaKnown RBP23.54■■□□□ 1.36
LMNA-221ENST00000506981 HDAC1Q13547 482 aaPredicted RBP23.54■■□□□ 1.36
LMNA-221ENST00000506981 TTF1Q15361 905 aaPredicted RBP23.54■■□□□ 1.36
LMNA-221ENST00000506981 NBPF12Q5TAG4 269 aaPredicted RBP23.54■■□□□ 1.36
LMNA-221ENST00000506981 DNAJC2Q99543 621 aaKnown RBP23.54■■□□□ 1.36
LMNA-221ENST00000506981 TMEM39BQ9GZU3 492 aa23.54■■□□□ 1.36
LMNA-221ENST00000506981 ANGEL1Q9UNK9 670 aaKnown RBP23.54■■□□□ 1.36
LMNA-221ENST00000506981 RPAP1Q9BWH6 1393 aaPredicted RBP23.53■■□□□ 1.36
LMNA-221ENST00000506981 SSC5DA1L4H1 1573 aa23.53■■□□□ 1.36
LMNA-221ENST00000506981 ZNF157P51786 506 aaPredicted RBP23.53■■□□□ 1.36
LMNA-221ENST00000506981 HOOK2Q96ED9 719 aa23.53■■□□□ 1.36
LMNA-221ENST00000506981 PIH1D3Q9NQM4 214 aaKnown RBP23.53■■□□□ 1.36
LMNA-221ENST00000506981 GPR75-ASB3A0A0A6YYF3 556 aa23.52■■□□□ 1.36
LMNA-221ENST00000506981 UBE2Q2LH0YL09 131 aa23.52■■□□□ 1.36
LMNA-221ENST00000506981 MAP3K12Q12852 859 aa23.52■■□□□ 1.36
LMNA-221ENST00000506981 MOB2Q70IA6 237 aa23.52■■□□□ 1.36
LMNA-221ENST00000506981 CCDC102AQ96A19 550 aa23.52■■□□□ 1.36
LMNA-221ENST00000506981 GCC1Q96CN9 775 aa23.52■■□□□ 1.36
LMNA-221ENST00000506981 RWDD1Q9H446 243 aaPredicted RBP23.52■■□□□ 1.36
LMNA-221ENST00000506981 NDUFB9Q9Y6M9 179 aa23.52■■□□□ 1.36
LMNA-221ENST00000506981 BAG3O95817 575 aa23.51■■□□□ 1.35
LMNA-221ENST00000506981 ATP5JP18859 108 aa23.51■■□□□ 1.35
LMNA-221ENST00000506981 IREB2P48200 963 aaKnown RBP23.51■■□□□ 1.35
LMNA-221ENST00000506981 ZNF384Q8TF68 577 aa23.51■■□□□ 1.35
LMNA-221ENST00000506981 FAM151AQ8WW52 585 aa23.51■■□□□ 1.35
LMNA-221ENST00000506981 MAP4K4O95819 1239 aaPredicted RBP23.5■■□□□ 1.35
LMNA-221ENST00000506981 TCP10Q12799 353 aa23.5■■□□□ 1.35
LMNA-221ENST00000506981 TEPSINQ96N21 525 aa23.5■■□□□ 1.35
LMNA-221ENST00000506981 BOLA2Q9H3K6 86 aa23.5■■□□□ 1.35
LMNA-221ENST00000506981 ECHDC1Q9NTX5 307 aa23.5■■□□□ 1.35
LMNA-221ENST00000506981 GOLIM4O00461 696 aa23.49■■□□□ 1.35
LMNA-221ENST00000506981 PLCG2P16885 1265 aa23.49■■□□□ 1.35
LMNA-221ENST00000506981 IRX6P78412 446 aaPredicted RBP23.49■■□□□ 1.35
LMNA-221ENST00000506981 NFIAQ12857 509 aa23.49■■□□□ 1.35
LMNA-221ENST00000506981 NOGQ13253 232 aa23.49■■□□□ 1.35
LMNA-221ENST00000506981 TMED8Q6PL24 325 aaPredicted RBP23.49■■□□□ 1.35
LMNA-221ENST00000506981 ANTXR1Q9H6X2 564 aa23.49■■□□□ 1.35
LMNA-221ENST00000506981 MYH1P12882 1939 aa23.49■■□□□ 1.35
LMNA-221ENST00000506981 ENTPD3O75355 529 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 CYP7A1P22680 504 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 MAP2K2P36507 400 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 RGS3P49796 1198 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 DCAF15Q66K64 600 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 MAGEB6Q8N7X4 407 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 IDI2Q9BXS1 227 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 PAG1Q9NWQ8 432 aa23.48■■□□□ 1.35
LMNA-221ENST00000506981 AOC2O75106 756 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 SLC10A3P09131 477 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 MAP2K1Q02750 393 aaPredicted RBP23.47■■□□□ 1.35
LMNA-221ENST00000506981 PICALMQ13492 652 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 MAP3K11Q16584 847 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 ANKRD45Q5TZF3 282 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 CDAN1Q8IWY9 1227 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 AIDAQ96BJ3 306 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 HAUS7Q99871 368 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 AATFQ9NY61 560 aaKnown RBP eCLIP23.47■■□□□ 1.35
LMNA-221ENST00000506981 FAM198AQ9UFP1 575 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 FZD1Q9UP38 647 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 RFX7Q2KHR2 1363 aa23.47■■□□□ 1.35
LMNA-221ENST00000506981 RHBDL3P58872 404 aa23.46■■□□□ 1.35
LMNA-221ENST00000506981 RASAL3Q86YV0 1011 aa23.46■■□□□ 1.35
LMNA-221ENST00000506981 ZSCAN29Q8IWY8 852 aaPredicted RBP23.46■■□□□ 1.35
LMNA-221ENST00000506981 TEX11Q8IYF3 940 aa23.46■■□□□ 1.35
LMNA-221ENST00000506981 UNCXA6NJT0 531 aa23.45■■□□□ 1.34
LMNA-221ENST00000506981 USP2O75604 605 aaPredicted RBP23.45■■□□□ 1.34
LMNA-221ENST00000506981 WDHD1O75717 1129 aaPredicted RBP23.45■■□□□ 1.34
LMNA-221ENST00000506981 HSPA1AP0DMV8 641 aaKnown RBP23.45■■□□□ 1.34
LMNA-221ENST00000506981 HSPA1BP0DMV9 641 aaKnown RBP23.45■■□□□ 1.34
LMNA-221ENST00000506981 LDLRAD1Q5T700 205 aa23.45■■□□□ 1.34
LMNA-221ENST00000506981 CERS3Q8IU89 383 aa23.45■■□□□ 1.34
LMNA-221ENST00000506981 ANKRD13AQ8IZ07 590 aa23.45■■□□□ 1.34
LMNA-221ENST00000506981 BEGAINQ9BUH8 593 aa23.45■■□□□ 1.34
LMNA-221ENST00000506981 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.45■■□□□ 1.34
LMNA-221ENST00000506981 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.45■■□□□ 1.34
LMNA-221ENST00000506981 LAMB1P07942 1786 aa23.45■■□□□ 1.34
LMNA-221ENST00000506981 TTC41PQ6P2S7 1318 aa23.44■■□□□ 1.34
LMNA-221ENST00000506981 FAM155AB1AL88 458 aaPredicted RBP23.44■■□□□ 1.34
LMNA-221ENST00000506981 ERC2O15083 957 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms