RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 SLF2Q8IX21 1173 aa19.08■□□□□ 0.64
MED28-204ENST00000506409 SIRT2Q8IXJ6 389 aa19.08■□□□□ 0.64
MED28-204ENST00000506409 EAF2Q96CJ1 260 aaPredicted RBP19.08■□□□□ 0.64
MED28-204ENST00000506409 DBNLQ9UJU6 430 aaKnown RBP19.08■□□□□ 0.64
MED28-204ENST00000506409 IREB2P48200 963 aaKnown RBP19.07■□□□□ 0.64
MED28-204ENST00000506409 TBC1D9Q6ZT07 1266 aa19.07■□□□□ 0.64
MED28-204ENST00000506409 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
MED28-204ENST00000506409 PRDM10Q9NQV6 1147 aa19.07■□□□□ 0.64
MED28-204ENST00000506409 TLR7Q9NYK1 1049 aaKnown RBP19.07■□□□□ 0.64
MED28-204ENST00000506409 GAKO14976 1311 aa19.06■□□□□ 0.64
MED28-204ENST00000506409 USP2O75604 605 aaPredicted RBP19.06■□□□□ 0.64
MED28-204ENST00000506409 MECOMQ03112 1051 aa19.06■□□□□ 0.64
MED28-204ENST00000506409 USP40Q9NVE5 1235 aa19.06■□□□□ 0.64
MED28-204ENST00000506409 MYH2Q9UKX2 1941 aa19.06■□□□□ 0.64
MED28-204ENST00000506409 UNCXA6NJT0 531 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 APBB1O00213 710 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 MKRN3Q13064 507 aaKnown RBP19.05■□□□□ 0.64
MED28-204ENST00000506409 AACSQ86V21 672 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 REM2Q8IYK8 340 aaPredicted RBP19.05■□□□□ 0.64
MED28-204ENST00000506409 RHPN1Q8TCX5 695 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 SLC10A4Q96EP9 437 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 FAM163AQ96GL9 167 aaPredicted RBP19.05■□□□□ 0.64
MED28-204ENST00000506409 ZNF512BQ96KM6 892 aaPredicted RBP19.05■□□□□ 0.64
MED28-204ENST00000506409 CSRNP1Q96S65 589 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 IL1RAPL2Q9NP60 686 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 SNRKQ9NRH2 765 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 RAI14Q9P0K7 980 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.05■□□□□ 0.64
MED28-204ENST00000506409 TSKSQ9UJT2 592 aa19.05■□□□□ 0.64
MED28-204ENST00000506409 RPAP1Q9BWH6 1393 aaPredicted RBP19.05■□□□□ 0.64
MED28-204ENST00000506409 MROH7-TTC4A0A0A0MT08 1334 aa19.04■□□□□ 0.64
MED28-204ENST00000506409 ANKRD13AQ8IZ07 590 aa19.04■□□□□ 0.64
MED28-204ENST00000506409 KIF1BPQ96EK5 621 aa19.04■□□□□ 0.64
MED28-204ENST00000506409 CLMNQ96JQ2 1002 aa19.04■□□□□ 0.64
MED28-204ENST00000506409 LRP2BPQ9P2M1 347 aa19.04■□□□□ 0.64
MED28-204ENST00000506409 BTDP43251 543 aa19.03■□□□□ 0.64
MED28-204ENST00000506409 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
MED28-204ENST00000506409 GSTO1P78417 241 aa19.03■□□□□ 0.64
MED28-204ENST00000506409 TCP10Q12799 353 aa19.03■□□□□ 0.64
MED28-204ENST00000506409 NFIAQ12857 509 aa19.03■□□□□ 0.64
MED28-204ENST00000506409 ZNF384Q8TF68 577 aa19.03■□□□□ 0.64
MED28-204ENST00000506409 FAM151AQ8WW52 585 aa19.03■□□□□ 0.64
MED28-204ENST00000506409 NSUN4Q96CB9 384 aaKnown RBP19.03■□□□□ 0.64
MED28-204ENST00000506409 HOOK2Q96ED9 719 aa19.03■□□□□ 0.64
MED28-204ENST00000506409 RAB11FIP3O75154 756 aa19.02■□□□□ 0.64
MED28-204ENST00000506409 LDHCP07864 332 aa19.02■□□□□ 0.64
MED28-204ENST00000506409 SPRYD7Q5W111 196 aa19.02■□□□□ 0.64
MED28-204ENST00000506409 CLASRPQ8N2M8 674 aaKnown RBP19.02■□□□□ 0.64
MED28-204ENST00000506409 FAM198AQ9UFP1 575 aa19.02■□□□□ 0.64
MED28-204ENST00000506409 AKAP11Q9UKA4 1901 aa19.02■□□□□ 0.63
MED28-204ENST00000506409 CYP2E1P05181 493 aaPredicted RBP19.01■□□□□ 0.63
MED28-204ENST00000506409 ZAP70P43403 619 aa19.01■□□□□ 0.63
MED28-204ENST00000506409 TNS4Q8IZW8 715 aa19.01■□□□□ 0.63
MED28-204ENST00000506409 RNF186Q9NXI6 227 aa19.01■□□□□ 0.63
MED28-204ENST00000506409 SAGE1Q9NXZ1 904 aa19.01■□□□□ 0.63
MED28-204ENST00000506409 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
MED28-204ENST00000506409 TRPA1O75762 1119 aa19■□□□□ 0.63
MED28-204ENST00000506409 ZBTB48P10074 688 aaPredicted RBP19■□□□□ 0.63
MED28-204ENST00000506409 SREBF2Q12772 1141 aa19■□□□□ 0.63
MED28-204ENST00000506409 DCAF15Q66K64 600 aa19■□□□□ 0.63
MED28-204ENST00000506409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19■□□□□ 0.63
MED28-204ENST00000506409 WNK4Q96J92 1243 aa19■□□□□ 0.63
MED28-204ENST00000506409 IDI2Q9BXS1 227 aa19■□□□□ 0.63
MED28-204ENST00000506409 BCL11AQ9H165 835 aa19■□□□□ 0.63
MED28-204ENST00000506409 OTOFQ9HC10 1997 aa19■□□□□ 0.63
MED28-204ENST00000506409 RFX7Q2KHR2 1363 aa18.99■□□□□ 0.63
MED28-204ENST00000506409 IFIT2P09913 472 aaKnown RBP18.99■□□□□ 0.63
MED28-204ENST00000506409 RGS3P49796 1198 aa18.99■□□□□ 0.63
MED28-204ENST00000506409 MAP3K9P80192 1104 aa18.99■□□□□ 0.63
MED28-204ENST00000506409 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.99■□□□□ 0.63
MED28-204ENST00000506409 ELP3Q9H9T3 547 aa18.99■□□□□ 0.63
MED28-204ENST00000506409 CSADQ9Y600 493 aa18.99■□□□□ 0.63
MED28-204ENST00000506409 ENTPD3O75355 529 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 WDHD1O75717 1129 aaPredicted RBP18.98■□□□□ 0.63
MED28-204ENST00000506409 TM4SF4P48230 202 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 RHBDL3P58872 404 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 VGLL4Q14135 290 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 NAA16Q6N069 864 aaPredicted RBP18.98■□□□□ 0.63
MED28-204ENST00000506409 MIGA2Q7L4E1 593 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 ZFPM1Q8IX07 1006 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 WRNIP1Q96S55 665 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 NOL10Q9BSC4 688 aaKnown RBP18.98■□□□□ 0.63
MED28-204ENST00000506409 PIH1D3Q9NQM4 214 aaKnown RBP18.98■□□□□ 0.63
MED28-204ENST00000506409 MAST2Q6P0Q8 1798 aa18.98■□□□□ 0.63
MED28-204ENST00000506409 MANSC4A6NHS7 340 aaPredicted RBP18.97■□□□□ 0.63
MED28-204ENST00000506409 IGSF3O75054 1194 aa18.97■□□□□ 0.63
MED28-204ENST00000506409 PICALMQ13492 652 aa18.97■□□□□ 0.63
MED28-204ENST00000506409 ZSCAN29Q8IWY8 852 aaPredicted RBP18.97■□□□□ 0.63
MED28-204ENST00000506409 OPTNQ96CV9 577 aa18.97■□□□□ 0.63
MED28-204ENST00000506409 ZNF341Q9BYN7 854 aa18.97■□□□□ 0.63
MED28-204ENST00000506409 AK9Q5TCS8 1911 aa18.97■□□□□ 0.63
MED28-204ENST00000506409 IDH1O75874 414 aaKnown RBP18.96■□□□□ 0.63
MED28-204ENST00000506409 MAP4K4O95819 1239 aaPredicted RBP18.96■□□□□ 0.63
MED28-204ENST00000506409 GJA5P36382 358 aa18.96■□□□□ 0.63
MED28-204ENST00000506409 LRRCC1Q9C099 1032 aa18.96■□□□□ 0.63
MED28-204ENST00000506409 DDX4Q9NQI0 724 aaKnown RBP18.96■□□□□ 0.63
MED28-204ENST00000506409 NDUFB9Q9Y6M9 179 aa18.96■□□□□ 0.63
MED28-204ENST00000506409 INHBEP58166 350 aa18.95■□□□□ 0.62
MED28-204ENST00000506409 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
MED28-204ENST00000506409 ZKSCAN4Q969J2 545 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms