RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 LDHBP07195 334 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-211ENST00000504318 PI16Q6UXB8 463 aa17.33■□□□□ 0.36
PDLIM7-211ENST00000504318 CNKSR2Q8WXI2 1034 aa17.33■□□□□ 0.36
PDLIM7-211ENST00000504318 MS4A4AQ96JQ5 239 aa17.33■□□□□ 0.36
PDLIM7-211ENST00000504318 PTPN18Q99952 460 aa17.33■□□□□ 0.36
PDLIM7-211ENST00000504318 HMG20BQ9P0W2 317 aa17.33■□□□□ 0.36
PDLIM7-211ENST00000504318 NOP58Q9Y2X3 529 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-211ENST00000504318 MANSC4A6NHS7 340 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 TNNI2P48788 182 aa17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 SREBF2Q12772 1141 aa17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 VGLL4Q14135 290 aa17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 IFNL1Q8IU54 200 aa17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 FAM163AQ96GL9 167 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 HTTP42858 3142 aa17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 DOCK2Q92608 1830 aa17.32■□□□□ 0.36
PDLIM7-211ENST00000504318 MCAMP43121 646 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 DGKZQ13574 1117 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 ITPRIPQ8IWB1 547 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 ZFPM1Q8IX07 1006 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 PANK1Q8TE04 598 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 ZNF296Q8WUU4 475 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 FAM151AQ8WW52 585 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 GPR108Q9NPR9 543 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
PDLIM7-211ENST00000504318 GPR25O00155 361 aa17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 FTSJ3Q8IY81 847 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 IDI2Q9BXS1 227 aa17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 ZNF112Q9UJU3 913 aa17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 MAST2Q6P0Q8 1798 aa17.3■□□□□ 0.36
PDLIM7-211ENST00000504318 WDHD1O75717 1129 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 INHBEP58166 350 aa17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 SH3BP5LQ7L8J4 393 aa17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 TMOD2Q9NZR1 351 aa17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 CDK5RAP2Q96SN8 1893 aa17.29■□□□□ 0.36
PDLIM7-211ENST00000504318 AK9Q5TCS8 1911 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 SPDYE5A6NIY4 337 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 RHBDL3P58872 404 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 CAP1Q01518 475 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 MECOMQ03112 1051 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 SPATA5Q8NB90 893 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 DBNDD2Q9BQY9 259 aa17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 DDX4Q9NQI0 724 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-211ENST00000504318 MROH7-TTC4A0A0A0MT08 1334 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 SIPA1L1O43166 1804 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 MAP3K10Q02779 954 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 CTU1Q7Z7A3 348 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 BRI3BPQ8WY22 251 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 USP40Q9NVE5 1235 aa17.27■□□□□ 0.36
PDLIM7-211ENST00000504318 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 INPP5BP32019 993 aa17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 RGS19P49795 217 aa17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 TCP10Q12799 353 aa17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 ZKSCAN4Q969J2 545 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 ZNF512BQ96KM6 892 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 TLR7Q9NYK1 1049 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 ABCF2Q9UG63 623 aa17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-211ENST00000504318 PTPRFP10586 1907 aa17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 SURF6O75683 361 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 SLURP2P0DP57 97 aa17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 BTDP43251 543 aa17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-211ENST00000504318 DDTLA6NHG4 134 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 PHF20L1A8MW92 1017 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 IRF6O14896 467 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 ENTPD3O75355 529 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 RGS3P49796 1198 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 CRHR2Q13324 411 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 NOL9Q5SY16 702 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 SPTY2D1Q68D10 685 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 DZIP1Q86YF9 867 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 ZBTB40Q9NUA8 1239 aa17.24■□□□□ 0.35
PDLIM7-211ENST00000504318 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-211ENST00000504318 CYP2E1P05181 493 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-211ENST00000504318 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
PDLIM7-211ENST00000504318 MOGSQ13724 837 aa17.23■□□□□ 0.35
PDLIM7-211ENST00000504318 DCAF15Q66K64 600 aa17.23■□□□□ 0.35
PDLIM7-211ENST00000504318 ERO1BQ86YB8 467 aa17.23■□□□□ 0.35
PDLIM7-211ENST00000504318 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms