RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 FANCCQ00597 558 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 AACSQ86V21 672 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 TEX2Q8IWB9 1127 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 REXO1L1PQ8IX06 675 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 CEP112Q8N8E3 955 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 ERCC4Q92889 916 aaPredicted RBP12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 FSD1Q9BTV5 496 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 LGR6Q9HBX8 967 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 MRFAP1Q9Y605 127 aa12.67□□□□□ -0.38
AC055717.1-201ENST00000502221 TAF5LO75529 589 aa12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 USP5P45974 858 aa12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 ST5P78524 1137 aa12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 TTC31Q49AM3 519 aaPredicted RBP12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 C10orf67Q8IYJ2 551 aa12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 UTP14AQ9BVJ6 771 aaKnown RBP12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.66□□□□□ -0.38
AC055717.1-201ENST00000502221 NBPF7P0C2Y1 421 aaPredicted RBP12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 LMAN1P49257 510 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 C1orf141Q5JVX7 400 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 GORABQ5T7V8 394 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 Q6ZUG5 572 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 IL17REQ8NFR9 667 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 NLGN2Q8NFZ4 835 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 USP28Q96RU2 1077 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 PARD6BQ9BYG5 372 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 JAK2O60674 1132 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 TOP1P11387 765 aaKnown RBP12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 GUCY2CP25092 1073 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 UBASH3AP57075 661 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 STK3Q13188 491 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 LONRF2Q1L5Z9 754 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 ELOA2Q8IYF1 753 aaPredicted RBP12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 ZNF274Q96GC6 653 aaPredicted RBP12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 FAM227BQ96M60 508 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 PPP2R2CQ9Y2T4 447 aa12.65□□□□□ -0.38
AC055717.1-201ENST00000502221 SASH3O75995 380 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 NCAPHQ15003 741 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 DHX32Q7L7V1 743 aaKnown RBP12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 VSTM4Q8IW00 320 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 MED4Q9NPJ6 270 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 RAB21Q9UL25 225 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 ASAP1Q9ULH1 1129 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 PCDHA7Q9UN72 937 aa12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 COL5A3P25940 1745 aaPredicted RBP12.64□□□□□ -0.39
AC055717.1-201ENST00000502221 SERPINC1P01008 464 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 MYL5Q02045 173 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 APOBRQ0VD83 1088 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 SCRN1Q12765 414 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 GNL2Q13823 731 aaKnown RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 HSP90B2PQ58FF3 399 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 SUGP1Q8IWZ8 645 aaKnown RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 LRRN4CLQ8ND94 238 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 C9orf78Q9NZ63 289 aaPredicted RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 SEC31AO94979 1220 aaKnown RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 CPP00450 1065 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 CHRM1P11229 460 aaPredicted RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 CMA1P23946 247 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 MCM3P25205 808 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 GNG11P61952 73 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 ITPK1Q13572 414 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 STK38Q15208 465 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 OLFM4Q6UX06 510 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 EFCAB13Q8IY85 973 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 LINC00301Q8NCQ3 95 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 LINC00116Q8NCU8 138 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 NCAPGQ9BPX3 1015 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 NAA15Q9BXJ9 866 aaKnown RBP12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 JRKLQ9Y4A0 524 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 SCN11AQ9UI33 1791 aa12.63□□□□□ -0.39
AC055717.1-201ENST00000502221 UTYO14607 1347 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 PTPDC1A2A3K4 754 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 VWA3AA6NCI4 1184 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 POLD1P28340 1107 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 DPCR1Q3MIW9 517 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 AXDND1Q5T1B0 1012 aaPredicted RBP12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 SRGAP1Q7Z6B7 1085 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 MSANTD4Q8NCY6 345 aa12.62□□□□□ -0.39
AC055717.1-201ENST00000502221 BAG1Q99933 345 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms