RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 LDHDQ86WU2 507 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 NIM1KQ8IY84 436 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 GPC2Q8N158 579 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 MPNDQ8N594 471 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 SEC31BQ9NQW1 1179 aa10.24□□□□□ -0.77
PUDP-205ENST00000498474 DUOX1Q9NRD9 1551 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 RAD17O75943 681 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 CALD1Q05682 793 aaKnown RBP10.23□□□□□ -0.77
PUDP-205ENST00000498474 CXCL9Q07325 125 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 NNTQ13423 1086 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 JMYQ8N9B5 988 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 TMX4Q9H1E5 349 aaPredicted RBP10.23□□□□□ -0.77
PUDP-205ENST00000498474 MAP3K2Q9Y2U5 619 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 PASKQ96RG2 1323 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 SPEF2Q9C093 1822 aa10.23□□□□□ -0.77
PUDP-205ENST00000498474 YDJCA8MPS7 323 aa10.22□□□□□ -0.77
PUDP-205ENST00000498474 GPSM2P81274 684 aa10.22□□□□□ -0.77
PUDP-205ENST00000498474 SF3B3Q15393 1217 aaKnown RBP10.22□□□□□ -0.77
PUDP-205ENST00000498474 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
PUDP-205ENST00000498474 CCDC30Q5VVM6 783 aa10.22□□□□□ -0.77
PUDP-205ENST00000498474 FAM9BQ8IZU0 186 aa10.22□□□□□ -0.77
PUDP-205ENST00000498474 CNTROBQ8N137 903 aa10.22□□□□□ -0.77
PUDP-205ENST00000498474 RTFDC1Q9BY42 306 aaPredicted RBP10.22□□□□□ -0.77
PUDP-205ENST00000498474 KCNQ5Q9NR82 932 aa10.22□□□□□ -0.77
PUDP-205ENST00000498474 NSFL1CQ9UNZ2 370 aaKnown RBP10.22□□□□□ -0.77
PUDP-205ENST00000498474 POLR2AP24928 1970 aaKnown RBP10.22□□□□□ -0.77
PUDP-205ENST00000498474 LRRC37AA6NMS7 1700 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 PI4KAP2A4QPH2 592 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 WTIPA6NIX2 430 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 LILRB3O75022 631 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 IGKV5-2P06315 115 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 GMPSP49915 693 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 KIAA2012Q0VF49 1180 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 TRIM28Q13263 835 aaKnown RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 CWF19L2Q2TBE0 894 aaKnown RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 TWISTNBQ3B726 338 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 COL13A1Q5TAT6 717 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 PI4KAP1Q8N8J0 262 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 ZBTB38Q8NAP3 1195 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 METTL22Q9BUU2 404 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 DBNDD1Q9H9R9 158 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 CWC25Q9NXE8 425 aaPredicted RBP10.21□□□□□ -0.77
PUDP-205ENST00000498474 POLLQ9UGP5 575 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 ZNRF3Q9ULT6 936 aa10.21□□□□□ -0.77
PUDP-205ENST00000498474 TRAF5O00463 557 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 HSPA1AP0DMV8 641 aaKnown RBP10.2□□□□□ -0.78
PUDP-205ENST00000498474 HSPA1BP0DMV9 641 aaKnown RBP10.2□□□□□ -0.78
PUDP-205ENST00000498474 MYH3P11055 1940 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 RPS8P62241 208 aaKnown RBP10.2□□□□□ -0.78
PUDP-205ENST00000498474 ARID5BQ14865 1188 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 SCN9AQ15858 1988 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 CCDC191Q8NCU4 936 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 SUPT20HQ8NEM7 779 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
PUDP-205ENST00000498474 DDX58O95786 925 aaKnown RBP10.19□□□□□ -0.78
PUDP-205ENST00000498474 PCCAP05165 728 aaPredicted RBP10.19□□□□□ -0.78
PUDP-205ENST00000498474 EXOSC9Q06265 439 aaKnown RBP10.19□□□□□ -0.78
PUDP-205ENST00000498474 WASHC4Q2M389 1173 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 CIAPIN1Q6FI81 312 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 DLK2Q6UY11 383 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 KSR2Q6VAB6 950 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 PNMA8AQ86V59 439 aaPredicted RBP10.19□□□□□ -0.78
PUDP-205ENST00000498474 FAM174AQ8TBP5 190 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 BCL2L13Q9BXK5 485 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 STK31Q9BXU1 1019 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 GPRC5DQ9NZD1 345 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
PUDP-205ENST00000498474 TMEM88BA6NKF7 163 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 PSMD14O00487 310 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 PDE8AO60658 829 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 TIMP2P16035 220 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 VEGFBP49765 207 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 HIRAP54198 1017 aaPredicted RBP10.18□□□□□ -0.78
PUDP-205ENST00000498474 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
PUDP-205ENST00000498474 TBC1D16Q8TBP0 767 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 TRPM4Q8TD43 1214 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 POLR3EQ9NVU0 708 aa10.18□□□□□ -0.78
PUDP-205ENST00000498474 CNTNAP1P78357 1384 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 NEURL1BA8MQ27 555 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 F6X3S4 739 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 WIPF1O43516 503 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 ECE2O60344 883 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 VAMP4O75379 141 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 ADH1CP00326 375 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 EGFRP00533 1210 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 FLIIQ13045 1269 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 AGERQ15109 404 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 TUSC1Q2TAM9 212 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 CCDC152Q4G0S7 254 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 USP50Q70EL3 339 aaPredicted RBP10.17□□□□□ -0.78
PUDP-205ENST00000498474 CDK15Q96Q40 435 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 KLF16Q9BXK1 252 aaPredicted RBP10.17□□□□□ -0.78
PUDP-205ENST00000498474 VPS33BQ9H267 617 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 GREM2Q9H772 168 aa10.17□□□□□ -0.78
PUDP-205ENST00000498474 ADARB2Q9NS39 739 aaKnown RBP10.17□□□□□ -0.78
PUDP-205ENST00000498474 CNOT7Q9UIV1 285 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms