RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 NFIAQ12857 509 aa18.68■□□□□ 0.58
NEK4-206ENST00000496822 AKAP2Q9Y2D5 859 aa18.68■□□□□ 0.58
NEK4-206ENST00000496822 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
NEK4-206ENST00000496822 PTPN18Q99952 460 aa18.67■□□□□ 0.58
NEK4-206ENST00000496822 PDS5AQ29RF7 1337 aaKnown RBP18.67■□□□□ 0.58
NEK4-206ENST00000496822 ALDH1A1P00352 501 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 INHBEP58166 350 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 TCP10Q12799 353 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 POLA2Q14181 598 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 MVPQ14764 893 aaKnown RBP18.66■□□□□ 0.58
NEK4-206ENST00000496822 NOM1Q5C9Z4 860 aaKnown RBP18.66■□□□□ 0.58
NEK4-206ENST00000496822 PI16Q6UXB8 463 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 ITPRIPQ8IWB1 547 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 NEUROD6Q96NK8 337 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 SNCAIPQ9Y6H5 919 aa18.66■□□□□ 0.58
NEK4-206ENST00000496822 FAM151AQ8WW52 585 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 ZKSCAN4Q969J2 545 aaPredicted RBP18.65■□□□□ 0.58
NEK4-206ENST00000496822 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 MS4A4AQ96JQ5 239 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 WRNIP1Q96S55 665 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 USP40Q9NVE5 1235 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 ABCF2Q9UG63 623 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 CSADQ9Y600 493 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 GAKO14976 1311 aa18.65■□□□□ 0.58
NEK4-206ENST00000496822 TESPA1A2RU30 521 aaPredicted RBP18.64■□□□□ 0.57
NEK4-206ENST00000496822 SPDYE5A6NIY4 337 aa18.64■□□□□ 0.57
NEK4-206ENST00000496822 FKTNO75072 461 aa18.64■□□□□ 0.57
NEK4-206ENST00000496822 G3BP1Q13283 466 aaKnown RBP eCLIP18.64■□□□□ 0.57
NEK4-206ENST00000496822 MIGA2Q7L4E1 593 aa18.64■□□□□ 0.57
NEK4-206ENST00000496822 DZIP1Q86YF9 867 aaKnown RBP18.64■□□□□ 0.57
NEK4-206ENST00000496822 ZGPATQ8N5A5 531 aaKnown RBP18.64■□□□□ 0.57
NEK4-206ENST00000496822 BRI3BPQ8WY22 251 aa18.64■□□□□ 0.57
NEK4-206ENST00000496822 HMG20BQ9P0W2 317 aa18.64■□□□□ 0.57
NEK4-206ENST00000496822 RFX7Q2KHR2 1363 aa18.64■□□□□ 0.57
NEK4-206ENST00000496822 ZBTB7BO15156 539 aaPredicted RBP18.63■□□□□ 0.57
NEK4-206ENST00000496822 CRHR2Q13324 411 aa18.63■□□□□ 0.57
NEK4-206ENST00000496822 ZFPM1Q8IX07 1006 aa18.63■□□□□ 0.57
NEK4-206ENST00000496822 SSH3Q8TE77 659 aa18.63■□□□□ 0.57
NEK4-206ENST00000496822 ZNF384Q8TF68 577 aa18.63■□□□□ 0.57
NEK4-206ENST00000496822 ARID4AP29374 1257 aaPredicted RBP18.62■□□□□ 0.57
NEK4-206ENST00000496822 INPP5BP32019 993 aa18.62■□□□□ 0.57
NEK4-206ENST00000496822 ATP8B2P98198 1209 aa18.62■□□□□ 0.57
NEK4-206ENST00000496822 DCAF15Q66K64 600 aa18.62■□□□□ 0.57
NEK4-206ENST00000496822 HOOK2Q96ED9 719 aa18.62■□□□□ 0.57
NEK4-206ENST00000496822 HPS5Q9UPZ3 1129 aa18.62■□□□□ 0.57
NEK4-206ENST00000496822 MYH2Q9UKX2 1941 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 ATRNL1Q5VV63 1379 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 CCL15-CCL14A0A0B4J2E2 113 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 BTDP43251 543 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 MECOMQ03112 1051 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 CCL15Q16663 113 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 GORABQ5T7V8 394 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 SPATA5Q8NB90 893 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 PANK1Q8TE04 598 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 ZNF341Q9BYN7 854 aa18.61■□□□□ 0.57
NEK4-206ENST00000496822 MROH7-TTC4A0A0A0MT08 1334 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 MCAMP43121 646 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 RGS19P49795 217 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 RGS3P49796 1198 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 SOX10P56693 466 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 ERO1BQ86YB8 467 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 DDX4Q9NQI0 724 aaKnown RBP18.6■□□□□ 0.57
NEK4-206ENST00000496822 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
NEK4-206ENST00000496822 IRF6O14896 467 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 SURF6O75683 361 aaKnown RBP18.59■□□□□ 0.57
NEK4-206ENST00000496822 WDHD1O75717 1129 aaPredicted RBP18.59■□□□□ 0.57
NEK4-206ENST00000496822 GTF2A2P52657 109 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 OS9Q13438 667 aaPredicted RBP18.59■□□□□ 0.57
NEK4-206ENST00000496822 PKN2Q16513 984 aaKnown RBP18.59■□□□□ 0.57
NEK4-206ENST00000496822 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
NEK4-206ENST00000496822 OTUD7BQ6GQQ9 843 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 ERICH6Q7L0X2 663 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 SH3BP5LQ7L8J4 393 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 FAM43AQ8N2R8 423 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 FAM163AQ96GL9 167 aaPredicted RBP18.59■□□□□ 0.57
NEK4-206ENST00000496822 DBNDD2Q9BQY9 259 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 IDI2Q9BXS1 227 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 ZNF112Q9UJU3 913 aa18.59■□□□□ 0.57
NEK4-206ENST00000496822 SLURP2P0DP57 97 aa18.58■□□□□ 0.56
NEK4-206ENST00000496822 CAP1Q01518 475 aa18.58■□□□□ 0.56
NEK4-206ENST00000496822 GPR108Q9NPR9 543 aa18.58■□□□□ 0.56
NEK4-206ENST00000496822 DOCK2Q92608 1830 aa18.58■□□□□ 0.56
NEK4-206ENST00000496822 ENTPD3O75355 529 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 RHBDL3P58872 404 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 PPIL2Q13356 520 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 PICALMQ13492 652 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 FBXO46Q6PJ61 603 aaPredicted RBP18.57■□□□□ 0.56
NEK4-206ENST00000496822 SLF2Q8IX21 1173 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 CD99L2Q8TCZ2 262 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 NSUN4Q96CB9 384 aaKnown RBP18.57■□□□□ 0.56
NEK4-206ENST00000496822 SNRKQ9NRH2 765 aa18.57■□□□□ 0.56
NEK4-206ENST00000496822 TLR7Q9NYK1 1049 aaKnown RBP18.57■□□□□ 0.56
NEK4-206ENST00000496822 NOP58Q9Y2X3 529 aaKnown RBP18.57■□□□□ 0.56
NEK4-206ENST00000496822 GPR75-ASB3A0A0A6YYF3 556 aa18.56■□□□□ 0.56
NEK4-206ENST00000496822 DDTLA6NHG4 134 aaPredicted RBP18.56■□□□□ 0.56
NEK4-206ENST00000496822 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms