RNA–Protein interactions for RNA: ENST00000495000.1

C1orf61-222, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-222	ENST00000495000	LDLRAD1	Q5T700	205 aa		13.3	□□□□□ -0.28
C1orf61-222	ENST00000495000	CDC42EP5	Q6NZY7	148 aa		13.3	□□□□□ -0.28
C1orf61-222	ENST00000495000	CDAN1	Q8IWY9	1227 aa		13.3	□□□□□ -0.28
C1orf61-222	ENST00000495000	TEPSIN	Q96N21	525 aa		13.3	□□□□□ -0.28
C1orf61-222	ENST00000495000	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.3	□□□□□ -0.28
C1orf61-222	ENST00000495000	PRDM10	Q9NQV6	1147 aa		13.3	□□□□□ -0.28
C1orf61-222	ENST00000495000	CA12	O43570	354 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	USP2	O75604	605 aa	Predicted RBP	13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	HSP90AB4P	Q58FF6	505 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	FKBP1C	Q5VVH2	108 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	TBC1D9	Q6ZT07	1266 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	FAM83A	Q86UY5	434 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	SLF2	Q8IX21	1173 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	EAF2	Q96CJ1	260 aa	Predicted RBP	13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	SLC10A4	Q96EP9	437 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	USP40	Q9NVE5	1235 aa		13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	DBNL	Q9UJU6	430 aa	Known RBP	13.29	□□□□□ -0.28
C1orf61-222	ENST00000495000	APBB1	O00213	710 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	MECOM	Q03112	1051 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	TCP10	Q12799	353 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	SIRT2	Q8IXJ6	389 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	REM2	Q8IYK8	340 aa	Predicted RBP	13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	CLMN	Q96JQ2	1002 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	CSRNP1	Q96S65	589 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	SNRK	Q9NRH2	765 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	TLR7	Q9NYK1	1049 aa	Known RBP	13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	RAI14	Q9P0K7	980 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	GAK	O14976	1311 aa		13.28	□□□□□ -0.28
C1orf61-222	ENST00000495000	MAST2	Q6P0Q8	1798 aa		13.27	□□□□□ -0.28
C1orf61-222	ENST00000495000	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.27	□□□□□ -0.28
C1orf61-222	ENST00000495000	BTD	P43251	543 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	AACS	Q86V21	672 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	ANKRD13A	Q8IZ07	590 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	TNS4	Q8IZW8	715 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	RHPN1	Q8TCX5	695 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	BCL11A	Q9H165	835 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	IL1RAPL2	Q9NP60	686 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	LRP2BP	Q9P2M1	347 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	MROH7-TTC4	A0A0A0MT08	1334 aa		13.27	□□□□□ -0.29
C1orf61-222	ENST00000495000	UNCX	A6NJT0	531 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	TRPA1	O75762	1119 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	GSTO1	P78417	241 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	NFIA	Q12857	509 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	SPRYD7	Q5W111	196 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	FAM151A	Q8WW52	585 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	DOCK2	Q92608	1830 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	NSUN4	Q96CB9	384 aa	Known RBP	13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	HOOK2	Q96ED9	719 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	KIF1BP	Q96EK5	621 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	FAM163A	Q96GL9	167 aa	Predicted RBP	13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	WNK4	Q96J92	1243 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	RNF186	Q9NXI6	227 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	SAGE1	Q9NXZ1	904 aa		13.26	□□□□□ -0.29
C1orf61-222	ENST00000495000	LDHC	P07864	332 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZAP70	P43403	619 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	RRP1	P56182	461 aa	Known RBP	13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	SREBF2	Q12772	1141 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	CLASRP	Q8N2M8	674 aa	Known RBP	13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZNF384	Q8TF68	577 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	ELP3	Q9H9T3	547 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	FAM198A	Q9UFP1	575 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	CASP8AP2	Q9UKL3	1982 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	LAMB1	P07942	1786 aa		13.25	□□□□□ -0.29
C1orf61-222	ENST00000495000	GPR75-ASB3	A0A0A6YYF3	556 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	RAB11FIP3	O75154	756 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	CYP2E1	P05181	493 aa	Predicted RBP	13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZBTB48	P10074	688 aa	Predicted RBP	13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	RGS3	P49796	1198 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	MAP3K9	P80192	1104 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	IFFO2	Q5TF58	517 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	DCAF15	Q66K64	600 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	MIGA2	Q7L4E1	593 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	CSAD	Q9Y600	493 aa		13.24	□□□□□ -0.29
C1orf61-222	ENST00000495000	MANSC4	A6NHS7	340 aa	Predicted RBP	13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	ENTPD3	O75355	529 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	IFIT2	P09913	472 aa	Known RBP	13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	TM4SF4	P48230	202 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	PICALM	Q13492	652 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	VGLL4	Q14135	290 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	NAA16	Q6N069	864 aa	Predicted RBP	13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZFPM1	Q8IX07	1006 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	OPTN	Q96CV9	577 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	WRNIP1	Q96S55	665 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	NOL10	Q9BSC4	688 aa	Known RBP	13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	IDI2	Q9BXS1	227 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	ZNF341	Q9BYN7	854 aa		13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	PIH1D3	Q9NQM4	214 aa	Known RBP	13.23	□□□□□ -0.29
C1orf61-222	ENST00000495000	RFX7	Q2KHR2	1363 aa		13.22	□□□□□ -0.29
C1orf61-222	ENST00000495000	WDHD1	O75717	1129 aa	Predicted RBP	13.22	□□□□□ -0.29
C1orf61-222	ENST00000495000	GJA5	P36382	358 aa		13.22	□□□□□ -0.29
C1orf61-222	ENST00000495000	RHBDL3	P58872	404 aa		13.22	□□□□□ -0.29
C1orf61-222	ENST00000495000	DDX4	Q9NQI0	724 aa	Known RBP	13.22	□□□□□ -0.29
C1orf61-222	ENST00000495000	NDUFB9	Q9Y6M9	179 aa		13.22	□□□□□ -0.29
C1orf61-222	ENST00000495000	CDK5RAP2	Q96SN8	1893 aa		13.21	□□□□□ -0.29
C1orf61-222	ENST00000495000	IDH1	O75874	414 aa	Known RBP	13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms