RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 NBPF12Q5TAG4 269 aaPredicted RBP19.45■□□□□ 0.7
LIME1-209ENST00000494776 CDC42EP5Q6NZY7 148 aa19.45■□□□□ 0.7
LIME1-209ENST00000494776 MOB2Q70IA6 237 aa19.45■□□□□ 0.7
LIME1-209ENST00000494776 TMEM39BQ9GZU3 492 aa19.45■□□□□ 0.7
LIME1-209ENST00000494776 MROH7-TTC4A0A0A0MT08 1334 aa19.45■□□□□ 0.7
LIME1-209ENST00000494776 FKBP1CQ5VVH2 108 aa19.44■□□□□ 0.7
LIME1-209ENST00000494776 CCDC102AQ96A19 550 aa19.44■□□□□ 0.7
LIME1-209ENST00000494776 NSUN4Q96CB9 384 aaKnown RBP19.44■□□□□ 0.7
LIME1-209ENST00000494776 FAM163AQ96GL9 167 aaPredicted RBP19.44■□□□□ 0.7
LIME1-209ENST00000494776 NOL10Q9BSC4 688 aaKnown RBP19.44■□□□□ 0.7
LIME1-209ENST00000494776 ANGEL1Q9UNK9 670 aaKnown RBP19.44■□□□□ 0.7
LIME1-209ENST00000494776 GAKO14976 1311 aa19.44■□□□□ 0.7
LIME1-209ENST00000494776 PAPPA2Q9BXP8 1791 aa19.44■□□□□ 0.7
LIME1-209ENST00000494776 BTDP43251 543 aa19.43■□□□□ 0.7
LIME1-209ENST00000494776 NAA16Q6N069 864 aaPredicted RBP19.43■□□□□ 0.7
LIME1-209ENST00000494776 FAM83AQ86UY5 434 aa19.43■□□□□ 0.7
LIME1-209ENST00000494776 ZBTB47Q9UFB7 747 aaPredicted RBP19.43■□□□□ 0.7
LIME1-209ENST00000494776 NDUFB9Q9Y6M9 179 aa19.43■□□□□ 0.7
LIME1-209ENST00000494776 AOC2O75106 756 aa19.42■□□□□ 0.7
LIME1-209ENST00000494776 IDH1O75874 414 aaKnown RBP19.42■□□□□ 0.7
LIME1-209ENST00000494776 TCP10Q12799 353 aa19.42■□□□□ 0.7
LIME1-209ENST00000494776 EXOC6Q8TAG9 804 aa19.42■□□□□ 0.7
LIME1-209ENST00000494776 AIDAQ96BJ3 306 aa19.42■□□□□ 0.7
LIME1-209ENST00000494776 DNAJC2Q99543 621 aaKnown RBP19.42■□□□□ 0.7
LIME1-209ENST00000494776 PIH1D3Q9NQM4 214 aaKnown RBP19.42■□□□□ 0.7
LIME1-209ENST00000494776 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
LIME1-209ENST00000494776 FZD1Q9UP38 647 aa19.42■□□□□ 0.7
LIME1-209ENST00000494776 IREB2P48200 963 aaKnown RBP19.41■□□□□ 0.7
LIME1-209ENST00000494776 TTF1Q15361 905 aaPredicted RBP19.41■□□□□ 0.7
LIME1-209ENST00000494776 HOOK2Q96ED9 719 aa19.41■□□□□ 0.7
LIME1-209ENST00000494776 MYH2Q9UKX2 1941 aa19.41■□□□□ 0.7
LIME1-209ENST00000494776 GPR75-ASB3A0A0A6YYF3 556 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 IGSF3O75054 1194 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 MAP2K2P36507 400 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 MAP2K1Q02750 393 aaPredicted RBP19.4■□□□□ 0.7
LIME1-209ENST00000494776 MAP3K12Q12852 859 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 NFIAQ12857 509 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 NOGQ13253 232 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 ZNF384Q8TF68 577 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.4■□□□□ 0.7
LIME1-209ENST00000494776 FAM151AQ8WW52 585 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 GPATCH3Q96I76 525 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 TEPSINQ96N21 525 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 PCNTO95613 3336 aa19.4■□□□□ 0.7
LIME1-209ENST00000494776 BAG3O95817 575 aa19.39■□□□□ 0.69
LIME1-209ENST00000494776 CDAN1Q8IWY9 1227 aa19.39■□□□□ 0.69
LIME1-209ENST00000494776 BEGAINQ9BUH8 593 aa19.39■□□□□ 0.69
LIME1-209ENST00000494776 BOLA2Q9H3K6 86 aa19.39■□□□□ 0.69
LIME1-209ENST00000494776 ANTXR1Q9H6X2 564 aa19.39■□□□□ 0.69
LIME1-209ENST00000494776 AKAP11Q9UKA4 1901 aa19.39■□□□□ 0.69
LIME1-209ENST00000494776 SSC5DA1L4H1 1573 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 GOLIM4O00461 696 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 SLC10A3P09131 477 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 ATP5JP18859 108 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 CYP7A1P22680 504 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 RGS3P49796 1198 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 PICALMQ13492 652 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 HDAC1Q13547 482 aaPredicted RBP19.38■□□□□ 0.69
LIME1-209ENST00000494776 ZSCAN29Q8IWY8 852 aaPredicted RBP19.38■□□□□ 0.69
LIME1-209ENST00000494776 SLC10A4Q96EP9 437 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 FAM198AQ9UFP1 575 aa19.38■□□□□ 0.69
LIME1-209ENST00000494776 FAM155AB1AL88 458 aaPredicted RBP19.37■□□□□ 0.69
LIME1-209ENST00000494776 ENTPD3O75355 529 aa19.37■□□□□ 0.69
LIME1-209ENST00000494776 USP2O75604 605 aaPredicted RBP19.37■□□□□ 0.69
LIME1-209ENST00000494776 MAP4K4O95819 1239 aaPredicted RBP19.37■□□□□ 0.69
LIME1-209ENST00000494776 PLCG2P16885 1265 aa19.37■□□□□ 0.69
LIME1-209ENST00000494776 IRX6P78412 446 aaPredicted RBP19.37■□□□□ 0.69
LIME1-209ENST00000494776 MAP3K11Q16584 847 aa19.37■□□□□ 0.69
LIME1-209ENST00000494776 COL13A1Q5TAT6 717 aaPredicted RBP19.37■□□□□ 0.69
LIME1-209ENST00000494776 RASAL3Q86YV0 1011 aa19.37■□□□□ 0.69
LIME1-209ENST00000494776 MAGEB6Q8N7X4 407 aa19.37■□□□□ 0.69
LIME1-209ENST00000494776 GCC1Q96CN9 775 aa19.37■□□□□ 0.69
LIME1-209ENST00000494776 IDI2Q9BXS1 227 aa19.37■□□□□ 0.69
LIME1-209ENST00000494776 RWDD1Q9H446 243 aaPredicted RBP19.37■□□□□ 0.69
LIME1-209ENST00000494776 AATFQ9NY61 560 aaKnown RBP eCLIP19.37■□□□□ 0.69
LIME1-209ENST00000494776 LDLRAD1Q5T700 205 aa19.36■□□□□ 0.69
LIME1-209ENST00000494776 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
LIME1-209ENST00000494776 DCAF15Q66K64 600 aa19.36■□□□□ 0.69
LIME1-209ENST00000494776 TEX11Q8IYF3 940 aa19.36■□□□□ 0.69
LIME1-209ENST00000494776 ANKRD13AQ8IZ07 590 aa19.36■□□□□ 0.69
LIME1-209ENST00000494776 ECHDC1Q9NTX5 307 aa19.36■□□□□ 0.69
LIME1-209ENST00000494776 PAG1Q9NWQ8 432 aa19.36■□□□□ 0.69
LIME1-209ENST00000494776 RPAP1Q9BWH6 1393 aaPredicted RBP19.35■□□□□ 0.69
LIME1-209ENST00000494776 WDHD1O75717 1129 aaPredicted RBP19.35■□□□□ 0.69
LIME1-209ENST00000494776 RHBDL3P58872 404 aa19.35■□□□□ 0.69
LIME1-209ENST00000494776 KIF23Q02241 960 aaPredicted RBP19.35■□□□□ 0.69
LIME1-209ENST00000494776 MKRN3Q13064 507 aaKnown RBP19.35■□□□□ 0.69
LIME1-209ENST00000494776 MIGA2Q7L4E1 593 aa19.35■□□□□ 0.69
LIME1-209ENST00000494776 TNS4Q8IZW8 715 aa19.35■□□□□ 0.69
LIME1-209ENST00000494776 WBP1LQ9NX94 342 aa19.35■□□□□ 0.69
LIME1-209ENST00000494776 UNCXA6NJT0 531 aa19.34■□□□□ 0.69
LIME1-209ENST00000494776 TMED8Q6PL24 325 aaPredicted RBP19.34■□□□□ 0.69
LIME1-209ENST00000494776 ADGRA1Q86SQ6 560 aa19.34■□□□□ 0.69
LIME1-209ENST00000494776 ZFPM1Q8IX07 1006 aa19.34■□□□□ 0.69
LIME1-209ENST00000494776 SH3RF3Q8TEJ3 882 aaPredicted RBP19.34■□□□□ 0.69
LIME1-209ENST00000494776 EDC3Q96F86 508 aaKnown RBP19.34■□□□□ 0.69
LIME1-209ENST00000494776 CLMNQ96JQ2 1002 aa19.34■□□□□ 0.69
LIME1-209ENST00000494776 CSRNP1Q96S65 589 aa19.34■□□□□ 0.69
LIME1-209ENST00000494776 ZIC5Q96T25 663 aa19.34■□□□□ 0.69
LIME1-209ENST00000494776 HAUS7Q99871 368 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms