RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 WDR66Q8TBY9 1149 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 LPIN2Q92539 896 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 ARMC5Q96C12 935 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 ARHGAP39Q9C0H5 1083 aa12.02□□□□□ -0.49
UBR4-216ENST00000494503 GNL3LQ9NVN8 582 aaKnown RBP12.02□□□□□ -0.49
UBR4-216ENST00000494503 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
UBR4-216ENST00000494503 INPP5BP32019 993 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 PPIL2Q13356 520 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 ATP2B3Q16720 1220 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 APOBEC3HQ6NTF7 200 aaKnown RBP12.01□□□□□ -0.49
UBR4-216ENST00000494503 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 CPA4Q9UI42 421 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 SUGT1Q9Y2Z0 365 aa12.01□□□□□ -0.49
UBR4-216ENST00000494503 MYH2Q9UKX2 1941 aa12□□□□□ -0.49
UBR4-216ENST00000494503 TLR2O60603 784 aa12□□□□□ -0.49
UBR4-216ENST00000494503 LDHBP07195 334 aaKnown RBP12□□□□□ -0.49
UBR4-216ENST00000494503 PRDX5P30044 214 aa12□□□□□ -0.49
UBR4-216ENST00000494503 LACTBP83111 547 aaPredicted RBP12□□□□□ -0.49
UBR4-216ENST00000494503 HHIPL2Q6UWX4 724 aa12□□□□□ -0.49
UBR4-216ENST00000494503 ZSCAN29Q8IWY8 852 aaPredicted RBP12□□□□□ -0.49
UBR4-216ENST00000494503 USP40Q9NVE5 1235 aa12□□□□□ -0.49
UBR4-216ENST00000494503 CEP126Q9P2H0 1117 aa12□□□□□ -0.49
UBR4-216ENST00000494503 BIN2Q9UBW5 565 aaPredicted RBP12□□□□□ -0.49
UBR4-216ENST00000494503 DOCK2Q92608 1830 aa12□□□□□ -0.49
UBR4-216ENST00000494503 PDHXO00330 501 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
UBR4-216ENST00000494503 FGFR2P21802 821 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 PPATQ06203 517 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 FKBP1CQ5VVH2 108 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 CDC42EP5Q6NZY7 148 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
UBR4-216ENST00000494503 RAET1EQ8TD07 263 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 FAM151AQ8WW52 585 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 DAGLAQ9Y4D2 1042 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
UBR4-216ENST00000494503 RPAP1Q9BWH6 1393 aaPredicted RBP11.99□□□□□ -0.49
UBR4-216ENST00000494503 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
UBR4-216ENST00000494503 PSMC4P43686 418 aa11.98□□□□□ -0.49
UBR4-216ENST00000494503 NFIAQ12857 509 aa11.98□□□□□ -0.49
UBR4-216ENST00000494503 HABP4Q5JVS0 413 aaKnown RBP11.98□□□□□ -0.49
UBR4-216ENST00000494503 PICK1Q9NRD5 415 aa11.98□□□□□ -0.49
UBR4-216ENST00000494503 ABCF2Q9UG63 623 aa11.98□□□□□ -0.49
UBR4-216ENST00000494503 HOXD10P28358 340 aa11.97□□□□□ -0.49
UBR4-216ENST00000494503 RFX5P48382 616 aaPredicted RBP11.97□□□□□ -0.49
UBR4-216ENST00000494503 PICALMQ13492 652 aa11.97□□□□□ -0.49
UBR4-216ENST00000494503 GADL1Q6ZQY3 521 aa11.97□□□□□ -0.49
UBR4-216ENST00000494503 CDCA7LQ96GN5 454 aa11.97□□□□□ -0.49
UBR4-216ENST00000494503 MRIQ9BWK5 157 aa11.97□□□□□ -0.49
UBR4-216ENST00000494503 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
UBR4-216ENST00000494503 DENND2AQ9ULE3 1009 aa11.97□□□□□ -0.49
UBR4-216ENST00000494503 PA2G4Q9UQ80 394 aaKnown RBP11.97□□□□□ -0.49
UBR4-216ENST00000494503 LRRFIP2Q9Y608 721 aaKnown RBP11.97□□□□□ -0.49
UBR4-216ENST00000494503 MYPNQ86TC9 1320 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 GNRH1P01148 92 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 PHKA1P46020 1223 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 SLFN5Q08AF3 891 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 ALDH1L2Q3SY69 923 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 ATG9AQ7Z3C6 839 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 ANKRD23Q86SG2 305 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 DPF3Q92784 378 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 PARK7Q99497 189 aaKnown RBP11.96□□□□□ -0.49
UBR4-216ENST00000494503 TAOK2Q9UL54 1235 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.49
UBR4-216ENST00000494503 HDAC5Q9UQL6 1122 aa11.96□□□□□ -0.49
UBR4-216ENST00000494503 TRIOBPQ9H2D6 2365 aa11.96□□□□□ -0.5
UBR4-216ENST00000494503 MGAMO43451 1857 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 CIAO1O76071 339 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 CYP2C8P10632 490 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 ADORA1P30542 326 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 IL15P40933 162 aaPredicted RBP11.95□□□□□ -0.5
UBR4-216ENST00000494503 RGS3P49796 1198 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 PRMT2P55345 433 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 FCGRTP55899 365 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 ZGPATQ8N5A5 531 aaKnown RBP11.95□□□□□ -0.5
UBR4-216ENST00000494503 TRIM47Q96LD4 638 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 FAM198AQ9UFP1 575 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 ZHX2Q9Y6X8 837 aa11.95□□□□□ -0.5
UBR4-216ENST00000494503 OSBPP22059 807 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 GRK4P32298 578 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 MTFR1Q15390 333 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 C17orf99Q6UX52 265 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 ZFPM1Q8IX07 1006 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 SLF2Q8IX21 1173 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 SMCR8Q8TEV9 937 aaPredicted RBP11.94□□□□□ -0.5
UBR4-216ENST00000494503 NEUROD6Q96NK8 337 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
UBR4-216ENST00000494503 SRRDQ9UH36 339 aa11.94□□□□□ -0.5
UBR4-216ENST00000494503 DOCK1Q14185 1865 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 TRIM75PA6NK02 468 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 SEMA3EO15041 775 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 BTDP43251 543 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 TIMM10P62072 90 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 UBXN2AP68543 259 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 PRKCZQ05513 592 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 CCDC102BQ68D86 513 aa11.93□□□□□ -0.5
UBR4-216ENST00000494503 SCYL3Q8IZE3 742 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms