RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 POLA2Q14181 598 aa12.08□□□□□ -0.48
UFD1-210ENST00000494054 CTU1Q7Z7A3 348 aaKnown RBP12.08□□□□□ -0.48
UFD1-210ENST00000494054 OPTNQ96CV9 577 aa12.08□□□□□ -0.48
UFD1-210ENST00000494054 PTPN18Q99952 460 aa12.08□□□□□ -0.48
UFD1-210ENST00000494054 OTOFQ9HC10 1997 aa12.08□□□□□ -0.48
UFD1-210ENST00000494054 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
UFD1-210ENST00000494054 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
UFD1-210ENST00000494054 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
UFD1-210ENST00000494054 TCP10Q12799 353 aa12.07□□□□□ -0.48
UFD1-210ENST00000494054 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
UFD1-210ENST00000494054 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
UFD1-210ENST00000494054 NOM1Q5C9Z4 860 aaKnown RBP12.07□□□□□ -0.48
UFD1-210ENST00000494054 ZFPM1Q8IX07 1006 aa12.07□□□□□ -0.48
UFD1-210ENST00000494054 FAM151AQ8WW52 585 aa12.07□□□□□ -0.48
UFD1-210ENST00000494054 USP40Q9NVE5 1235 aa12.07□□□□□ -0.48
UFD1-210ENST00000494054 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
UFD1-210ENST00000494054 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
UFD1-210ENST00000494054 FKTNO75072 461 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 PI16Q6UXB8 463 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 FTSJ3Q8IY81 847 aaKnown RBP12.06□□□□□ -0.48
UFD1-210ENST00000494054 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 ZNF384Q8TF68 577 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
UFD1-210ENST00000494054 MS4A4AQ96JQ5 239 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 HMG20BQ9P0W2 317 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 SNCAIPQ9Y6H5 919 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 GAKO14976 1311 aa12.06□□□□□ -0.48
UFD1-210ENST00000494054 PDS5AQ29RF7 1337 aaKnown RBP12.06□□□□□ -0.48
UFD1-210ENST00000494054 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
UFD1-210ENST00000494054 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
UFD1-210ENST00000494054 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
UFD1-210ENST00000494054 PANK1Q8TE04 598 aa12.05□□□□□ -0.48
UFD1-210ENST00000494054 BRI3BPQ8WY22 251 aa12.05□□□□□ -0.48
UFD1-210ENST00000494054 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
UFD1-210ENST00000494054 WRNIP1Q96S55 665 aa12.05□□□□□ -0.48
UFD1-210ENST00000494054 CSADQ9Y600 493 aa12.05□□□□□ -0.48
UFD1-210ENST00000494054 LAMB1P07942 1786 aa12.05□□□□□ -0.48
UFD1-210ENST00000494054 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 INPP5BP32019 993 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 RGS19P49795 217 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 MECOMQ03112 1051 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 CRHR2Q13324 411 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 GORABQ5T7V8 394 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 SH3BP5LQ7L8J4 393 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
UFD1-210ENST00000494054 SPATA5Q8NB90 893 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 HOOK2Q96ED9 719 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
UFD1-210ENST00000494054 ZNF341Q9BYN7 854 aa12.04□□□□□ -0.48
UFD1-210ENST00000494054 CCL15-CCL14A0A0B4J2E2 113 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
UFD1-210ENST00000494054 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
UFD1-210ENST00000494054 ARID4AP29374 1257 aaPredicted RBP12.03□□□□□ -0.48
UFD1-210ENST00000494054 MCAMP43121 646 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 RGS3P49796 1198 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 CCL15Q16663 113 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 TNNI3KQ59H18 835 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 SPTY2D1Q68D10 685 aaPredicted RBP12.03□□□□□ -0.48
UFD1-210ENST00000494054 ERICH6Q7L0X2 663 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 DBNDD2Q9BQY9 259 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 GPR108Q9NPR9 543 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 FPGT-TNNI3KV9GXZ4 949 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 RFX7Q2KHR2 1363 aa12.03□□□□□ -0.48
UFD1-210ENST00000494054 MYH2Q9UKX2 1941 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 GPR75-ASB3A0A0A6YYF3 556 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 IRF6O14896 467 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 SLURP2P0DP57 97 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 BTDP43251 543 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 GTF2A2P52657 109 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 RHBDL3P58872 404 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 CAP1Q01518 475 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
UFD1-210ENST00000494054 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.49
UFD1-210ENST00000494054 OTUD7BQ6GQQ9 843 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 FAM43AQ8N2R8 423 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.49
UFD1-210ENST00000494054 DDX4Q9NQI0 724 aaKnown RBP12.02□□□□□ -0.49
UFD1-210ENST00000494054 SNRKQ9NRH2 765 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 NOP58Q9Y2X3 529 aaKnown RBP12.02□□□□□ -0.49
UFD1-210ENST00000494054 MROH7-TTC4A0A0A0MT08 1334 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
UFD1-210ENST00000494054 DDTLA6NHG4 134 aaPredicted RBP12.01□□□□□ -0.49
UFD1-210ENST00000494054 ENTPD3O75355 529 aa12.01□□□□□ -0.49
UFD1-210ENST00000494054 UQCRFS1P1P0C7P4 283 aa12.01□□□□□ -0.49
UFD1-210ENST00000494054 SOX10P56693 466 aa12.01□□□□□ -0.49
UFD1-210ENST00000494054 PPIL2Q13356 520 aa12.01□□□□□ -0.49
UFD1-210ENST00000494054 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
UFD1-210ENST00000494054 SLF2Q8IX21 1173 aa12.01□□□□□ -0.49
UFD1-210ENST00000494054 RAI14Q9P0K7 980 aa12.01□□□□□ -0.49
UFD1-210ENST00000494054 PHF20L1A8MW92 1017 aa12□□□□□ -0.49
UFD1-210ENST00000494054 MLLT1Q03111 559 aaPredicted RBP12□□□□□ -0.49
UFD1-210ENST00000494054 PPATQ06203 517 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 274.3 ms