RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
PFDN6-207ENST00000491382 TLR7Q9NYK1 1049 aaKnown RBP19.62■□□□□ 0.73
PFDN6-207ENST00000491382 LRP2BPQ9P2M1 347 aa19.62■□□□□ 0.73
PFDN6-207ENST00000491382 PCNTO95613 3336 aa19.62■□□□□ 0.73
PFDN6-207ENST00000491382 GAKO14976 1311 aa19.61■□□□□ 0.73
PFDN6-207ENST00000491382 MECOMQ03112 1051 aa19.61■□□□□ 0.73
PFDN6-207ENST00000491382 HOOK2Q96ED9 719 aa19.61■□□□□ 0.73
PFDN6-207ENST00000491382 TMEM39BQ9GZU3 492 aa19.61■□□□□ 0.73
PFDN6-207ENST00000491382 RAI14Q9P0K7 980 aa19.61■□□□□ 0.73
PFDN6-207ENST00000491382 RPAP1Q9BWH6 1393 aaPredicted RBP19.6■□□□□ 0.73
PFDN6-207ENST00000491382 MROH7-TTC4A0A0A0MT08 1334 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 LDHCP07864 332 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 IREB2P48200 963 aaKnown RBP19.6■□□□□ 0.73
PFDN6-207ENST00000491382 MAP3K11Q16584 847 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 CDC42EP5Q6NZY7 148 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 TBC1D9Q6ZT07 1266 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 RASAL3Q86YV0 1011 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 FAM163AQ96GL9 167 aaPredicted RBP19.6■□□□□ 0.73
PFDN6-207ENST00000491382 SNRKQ9NRH2 765 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 USP40Q9NVE5 1235 aa19.6■□□□□ 0.73
PFDN6-207ENST00000491382 AK9Q5TCS8 1911 aa19.59■□□□□ 0.73
PFDN6-207ENST00000491382 UNCXA6NJT0 531 aa19.59■□□□□ 0.73
PFDN6-207ENST00000491382 IGSF3O75054 1194 aa19.59■□□□□ 0.73
PFDN6-207ENST00000491382 IFIT2P09913 472 aaKnown RBP19.59■□□□□ 0.73
PFDN6-207ENST00000491382 TEPSINQ96N21 525 aa19.59■□□□□ 0.73
PFDN6-207ENST00000491382 BTDP43251 543 aa19.58■□□□□ 0.72
PFDN6-207ENST00000491382 LDLRAD1Q5T700 205 aa19.58■□□□□ 0.72
PFDN6-207ENST00000491382 REM2Q8IYK8 340 aaPredicted RBP19.58■□□□□ 0.72
PFDN6-207ENST00000491382 NSUN4Q96CB9 384 aaKnown RBP19.58■□□□□ 0.72
PFDN6-207ENST00000491382 OTOFQ9HC10 1997 aa19.57■□□□□ 0.72
PFDN6-207ENST00000491382 MYO5AQ9Y4I1 1855 aaKnown RBP19.57■□□□□ 0.72
PFDN6-207ENST00000491382 FOXN1O15353 648 aa19.57■□□□□ 0.72
PFDN6-207ENST00000491382 CA12O43570 354 aa19.57■□□□□ 0.72
PFDN6-207ENST00000491382 ZAP70P43403 619 aa19.57■□□□□ 0.72
PFDN6-207ENST00000491382 CTCFP49711 727 aaPredicted RBP19.57■□□□□ 0.72
PFDN6-207ENST00000491382 KIF23Q02241 960 aaPredicted RBP19.57■□□□□ 0.72
PFDN6-207ENST00000491382 FAM151AQ8WW52 585 aa19.57■□□□□ 0.72
PFDN6-207ENST00000491382 NOL10Q9BSC4 688 aaKnown RBP19.57■□□□□ 0.72
PFDN6-207ENST00000491382 LRRCC1Q9C099 1032 aa19.57■□□□□ 0.72
PFDN6-207ENST00000491382 FZD1Q9UP38 647 aa19.57■□□□□ 0.72
PFDN6-207ENST00000491382 GPR75-ASB3A0A0A6YYF3 556 aa19.56■□□□□ 0.72
PFDN6-207ENST00000491382 USP2O75604 605 aaPredicted RBP19.56■□□□□ 0.72
PFDN6-207ENST00000491382 CYP2E1P05181 493 aaPredicted RBP19.56■□□□□ 0.72
PFDN6-207ENST00000491382 ANKRD13AQ8IZ07 590 aa19.56■□□□□ 0.72
PFDN6-207ENST00000491382 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
PFDN6-207ENST00000491382 DOCK2Q92608 1830 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 MAP4K4O95819 1239 aaPredicted RBP19.55■□□□□ 0.72
PFDN6-207ENST00000491382 TCP10Q12799 353 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 DCAF15Q66K64 600 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 NAA16Q6N069 864 aaPredicted RBP19.55■□□□□ 0.72
PFDN6-207ENST00000491382 CDAN1Q8IWY9 1227 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 SLC10A4Q96EP9 437 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 CRBNQ96SW2 442 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 ZIC5Q96T25 663 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 IDI2Q9BXS1 227 aa19.55■□□□□ 0.72
PFDN6-207ENST00000491382 ENTPD3O75355 529 aa19.54■□□□□ 0.72
PFDN6-207ENST00000491382 NFIAQ12857 509 aa19.54■□□□□ 0.72
PFDN6-207ENST00000491382 ZNF384Q8TF68 577 aa19.54■□□□□ 0.72
PFDN6-207ENST00000491382 DCTPP1Q9H773 170 aa19.54■□□□□ 0.72
PFDN6-207ENST00000491382 BAG3O95817 575 aa19.53■□□□□ 0.72
PFDN6-207ENST00000491382 RGS3P49796 1198 aa19.53■□□□□ 0.72
PFDN6-207ENST00000491382 AAMPQ13685 434 aa19.53■□□□□ 0.72
PFDN6-207ENST00000491382 TTF1Q15361 905 aaPredicted RBP19.53■□□□□ 0.72
PFDN6-207ENST00000491382 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.53■□□□□ 0.72
PFDN6-207ENST00000491382 FAM198AQ9UFP1 575 aa19.53■□□□□ 0.72
PFDN6-207ENST00000491382 RFX7Q2KHR2 1363 aa19.53■□□□□ 0.72
PFDN6-207ENST00000491382 LAMB1P07942 1786 aa19.52■□□□□ 0.72
PFDN6-207ENST00000491382 IDH1O75874 414 aaKnown RBP19.52■□□□□ 0.72
PFDN6-207ENST00000491382 ZBTB48P10074 688 aaPredicted RBP19.52■□□□□ 0.72
PFDN6-207ENST00000491382 PLCG2P16885 1265 aa19.52■□□□□ 0.72
PFDN6-207ENST00000491382 SPRYD7Q5W111 196 aa19.52■□□□□ 0.72
PFDN6-207ENST00000491382 TMED8Q6PL24 325 aaPredicted RBP19.52■□□□□ 0.72
PFDN6-207ENST00000491382 CLMNQ96JQ2 1002 aa19.52■□□□□ 0.72
PFDN6-207ENST00000491382 PIH1D3Q9NQM4 214 aaKnown RBP19.52■□□□□ 0.72
PFDN6-207ENST00000491382 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.52■□□□□ 0.72
PFDN6-207ENST00000491382 PCDHB15Q9Y5E8 787 aa19.52■□□□□ 0.72
PFDN6-207ENST00000491382 CSADQ9Y600 493 aa19.52■□□□□ 0.72
PFDN6-207ENST00000491382 WDHD1O75717 1129 aaPredicted RBP19.51■□□□□ 0.71
PFDN6-207ENST00000491382 RHBDL3P58872 404 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 MAP3K9P80192 1104 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 SREBF2Q12772 1141 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 MAP3K12Q12852 859 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 PICALMQ13492 652 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 ZSCAN29Q8IWY8 852 aaPredicted RBP19.51■□□□□ 0.71
PFDN6-207ENST00000491382 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.51■□□□□ 0.718e-9■■□□□ 14.5
PFDN6-207ENST00000491382 CSRNP1Q96S65 589 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 ZNF341Q9BYN7 854 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 SAGE1Q9NXZ1 904 aa19.51■□□□□ 0.71
PFDN6-207ENST00000491382 NPM3O75607 178 aaKnown RBP19.5■□□□□ 0.71
PFDN6-207ENST00000491382 HSPA8P11142 646 aaKnown RBP19.5■□□□□ 0.71
PFDN6-207ENST00000491382 LBX1P52954 281 aa19.5■□□□□ 0.71
PFDN6-207ENST00000491382 MKRN3Q13064 507 aaKnown RBP19.5■□□□□ 0.71
PFDN6-207ENST00000491382 WNK4Q96J92 1243 aa19.5■□□□□ 0.71
PFDN6-207ENST00000491382 WRNIP1Q96S55 665 aa19.5■□□□□ 0.71
PFDN6-207ENST00000491382 NDUFB9Q9Y6M9 179 aa19.5■□□□□ 0.71
PFDN6-207ENST00000491382 VGLL4Q14135 290 aa19.49■□□□□ 0.71
PFDN6-207ENST00000491382 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.49■□□□□ 0.71
PFDN6-207ENST00000491382 CERS3Q8IU89 383 aa19.49■□□□□ 0.71
PFDN6-207ENST00000491382 TEX11Q8IYF3 940 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms