RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CACNA2D4Q7Z3S7 1137 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 IFT81Q8WYA0 676 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 GCKP35557 465 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 TDRD12Q587J7 1177 aaKnown RBP12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 CCDC178Q5BJE1 867 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 KSR2Q6VAB6 950 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 CCDC51Q96ER9 411 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 SAMM50Q9Y512 469 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 ARHGAP31Q2M1Z3 1444 aa12.76□□□□□ -0.37
CRNKL1-204ENST00000490910 GOLGA8KD6RF30 607 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 IFIT3O14879 490 aaKnown RBP12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 ZBTB43O43298 467 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 TRIM14Q14142 442 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 ANKS4BQ8N8V4 417 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 SMARCC2Q8TAQ2 1214 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 HPDP32754 393 aaPredicted RBP12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 CWF19L2Q2TBE0 894 aaKnown RBP12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 NACAP1Q9BZK3 213 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 VPS16Q9H269 839 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 POSTNQ15063 836 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 ZNF446Q9NWS9 450 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 CLIC4Q9Y696 253 aa12.75□□□□□ -0.37
CRNKL1-204ENST00000490910 MACROD2A1Z1Q3 448 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 POLR2DO15514 142 aaKnown RBP12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 TMEM67Q5HYA8 995 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 CORO7P57737 925 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 NSUN7Q8NE18 718 aaKnown RBP12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 N4BP2L2Q92802 583 aaPredicted RBP12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 MADDQ8WXG6 1647 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 SYNRGQ9UMZ2 1314 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 PBRM1Q86U86 1689 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 BUB1BO60566 1050 aaPredicted RBP12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 ATP1A2P50993 1020 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 C8orf74Q6P047 294 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 WDR24Q96S15 920 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 GOLPH3LQ9H4A5 285 aa12.74□□□□□ -0.37
CRNKL1-204ENST00000490910 CCDC57Q2TAC2 916 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 TTC19Q6DKK2 380 aaPredicted RBP12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 LINC00301Q8NCQ3 95 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 SNRKQ9NRH2 765 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 PCDHA5Q9Y5H7 936 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 YTHDC2Q9H6S0 1430 aaKnown RBP12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 RMND1Q9NWS8 449 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 PARP3Q9Y6F1 533 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 E7EVH7 732 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 CHUKO15111 745 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 ENOX2Q16206 610 aaKnown RBP12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 JAKMIP2Q96AA8 810 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 BPIFA3Q9BQP9 254 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 PYM1Q9BRP8 204 aaKnown RBP12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 PAG1Q9NWQ8 432 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 SUFUQ9UMX1 484 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 ATP10DQ9P241 1426 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 MAP3K9P80192 1104 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 AIDAQ96BJ3 306 aa12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
CRNKL1-204ENST00000490910 CPSF1Q10570 1443 aaKnown RBP12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 IQGAP3Q86VI3 1631 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 SNCBQ16143 134 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 AP1ARQ63HQ0 302 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 EDC3Q96F86 508 aaKnown RBP12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 FUT8Q9BYC5 575 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 MYO1AQ9UBC5 1043 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 BAIAP2L1Q9UHR4 511 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 FANCAO15360 1455 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 A0A087WZG4 1122 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 EAF2Q96CJ1 260 aaPredicted RBP12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 TAF5LO75529 589 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 SLC8A1P32418 973 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 TOGARAM2Q6ZUX3 1019 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 GOPCQ9HD26 462 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 LCMT1Q9UIC8 334 aa12.72□□□□□ -0.37
CRNKL1-204ENST00000490910 SOWAHDA6NJG2 315 aa12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 FMR1NBQ8N0W7 255 aaPredicted RBP12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 NAPBQ9H115 298 aa12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 ZNF827Q17R98 1081 aa12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 FAM114A1Q8IWE2 563 aa12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 HAUS4Q9H6D7 363 aa12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 HELLSQ9NRZ9 838 aa12.71□□□□□ -0.37
CRNKL1-204ENST00000490910 FRMD3A2A2Y4 597 aa12.71□□□□□ -0.38
CRNKL1-204ENST00000490910 TRIM75PA6NK02 468 aa12.71□□□□□ -0.38
CRNKL1-204ENST00000490910 ZMYND10O75800 440 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms