RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 DCTPP1Q9H773 170 aa19.25■□□□□ 0.67
LMX1A-204ENST00000489443 FZD1Q9UP38 647 aa19.25■□□□□ 0.67
LMX1A-204ENST00000489443 GSTO1P78417 241 aa19.24■□□□□ 0.67
LMX1A-204ENST00000489443 ARMC9Q7Z3E5 817 aa19.24■□□□□ 0.67
LMX1A-204ENST00000489443 ZNF384Q8TF68 577 aa19.24■□□□□ 0.67
LMX1A-204ENST00000489443 NSUN4Q96CB9 384 aaKnown RBP19.24■□□□□ 0.67
LMX1A-204ENST00000489443 ANGEL1Q9UNK9 670 aaKnown RBP19.24■□□□□ 0.67
LMX1A-204ENST00000489443 NDUFB9Q9Y6M9 179 aa19.24■□□□□ 0.67
LMX1A-204ENST00000489443 MYO5AQ9Y4I1 1855 aaKnown RBP19.24■□□□□ 0.67
LMX1A-204ENST00000489443 MROH7-TTC4A0A0A0MT08 1334 aa19.24■□□□□ 0.67
LMX1A-204ENST00000489443 GAKO14976 1311 aa19.24■□□□□ 0.67
LMX1A-204ENST00000489443 PPP1R12BO60237 982 aaPredicted RBP19.23■□□□□ 0.67
LMX1A-204ENST00000489443 LDHCP07864 332 aa19.23■□□□□ 0.67
LMX1A-204ENST00000489443 FKBP1CQ5VVH2 108 aa19.23■□□□□ 0.67
LMX1A-204ENST00000489443 CDAN1Q8IWY9 1227 aa19.23■□□□□ 0.67
LMX1A-204ENST00000489443 FAM163AQ96GL9 167 aaPredicted RBP19.23■□□□□ 0.67
LMX1A-204ENST00000489443 TEPSINQ96N21 525 aa19.23■□□□□ 0.67
LMX1A-204ENST00000489443 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.23■□□□□ 0.67
LMX1A-204ENST00000489443 AK9Q5TCS8 1911 aa19.23■□□□□ 0.67
LMX1A-204ENST00000489443 BTDP43251 543 aa19.22■□□□□ 0.67
LMX1A-204ENST00000489443 TCP10Q12799 353 aa19.22■□□□□ 0.67
LMX1A-204ENST00000489443 FAM83AQ86UY5 434 aa19.22■□□□□ 0.67
LMX1A-204ENST00000489443 CCDC102AQ96A19 550 aa19.22■□□□□ 0.67
LMX1A-204ENST00000489443 PIH1D3Q9NQM4 214 aaKnown RBP19.22■□□□□ 0.67
LMX1A-204ENST00000489443 SSC5DA1L4H1 1573 aa19.22■□□□□ 0.67
LMX1A-204ENST00000489443 NFIAQ12857 509 aa19.21■□□□□ 0.67
LMX1A-204ENST00000489443 NAA16Q6N069 864 aaPredicted RBP19.21■□□□□ 0.67
LMX1A-204ENST00000489443 EXOC6Q8TAG9 804 aa19.21■□□□□ 0.67
LMX1A-204ENST00000489443 GPR75-ASB3A0A0A6YYF3 556 aa19.2■□□□□ 0.66
LMX1A-204ENST00000489443 IDH1O75874 414 aaKnown RBP19.2■□□□□ 0.66
LMX1A-204ENST00000489443 HSPA1AP0DMV8 641 aaKnown RBP19.2■□□□□ 0.66
LMX1A-204ENST00000489443 HSPA1BP0DMV9 641 aaKnown RBP19.2■□□□□ 0.66
LMX1A-204ENST00000489443 MAP2K2P36507 400 aa19.2■□□□□ 0.66
LMX1A-204ENST00000489443 NOGQ13253 232 aa19.2■□□□□ 0.66
LMX1A-204ENST00000489443 FAM151AQ8WW52 585 aa19.2■□□□□ 0.66
LMX1A-204ENST00000489443 ANTXR1Q9H6X2 564 aa19.2■□□□□ 0.66
LMX1A-204ENST00000489443 FAM155AB1AL88 458 aaPredicted RBP19.19■□□□□ 0.66
LMX1A-204ENST00000489443 USP2O75604 605 aaPredicted RBP19.19■□□□□ 0.66
LMX1A-204ENST00000489443 AAMPQ13685 434 aa19.19■□□□□ 0.66
LMX1A-204ENST00000489443 ZIC5Q96T25 663 aa19.19■□□□□ 0.66
LMX1A-204ENST00000489443 DNAJC2Q99543 621 aaKnown RBP19.19■□□□□ 0.66
LMX1A-204ENST00000489443 NOL10Q9BSC4 688 aaKnown RBP19.19■□□□□ 0.66
LMX1A-204ENST00000489443 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
LMX1A-204ENST00000489443 SLC10A3P09131 477 aa19.18■□□□□ 0.66
LMX1A-204ENST00000489443 IREB2P48200 963 aaKnown RBP19.18■□□□□ 0.66
LMX1A-204ENST00000489443 RGS3P49796 1198 aa19.18■□□□□ 0.66
LMX1A-204ENST00000489443 MAP2K1Q02750 393 aaPredicted RBP19.18■□□□□ 0.66
LMX1A-204ENST00000489443 LDLRAD1Q5T700 205 aa19.18■□□□□ 0.66
LMX1A-204ENST00000489443 RASAL3Q86YV0 1011 aa19.18■□□□□ 0.66
LMX1A-204ENST00000489443 GOLIM4O00461 696 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 ATP5JP18859 108 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
LMX1A-204ENST00000489443 PICALMQ13492 652 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 MAP3K11Q16584 847 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 ZFPM1Q8IX07 1006 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.17■□□□□ 0.66
LMX1A-204ENST00000489443 AIDAQ96BJ3 306 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 SLC10A4Q96EP9 437 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 BOLA2Q9H3K6 86 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 WBP1LQ9NX94 342 aa19.17■□□□□ 0.66
LMX1A-204ENST00000489443 THSD7BQ9C0I4 1608 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 WDHD1O75717 1129 aaPredicted RBP19.16■□□□□ 0.66
LMX1A-204ENST00000489443 CYP7A1P22680 504 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 RHBDL3P58872 404 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 KIF23Q02241 960 aaPredicted RBP19.16■□□□□ 0.66
LMX1A-204ENST00000489443 MAP3K12Q12852 859 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 MKRN3Q13064 507 aaKnown RBP19.16■□□□□ 0.66
LMX1A-204ENST00000489443 TTF1Q15361 905 aaPredicted RBP19.16■□□□□ 0.66
LMX1A-204ENST00000489443 ADGRA1Q86SQ6 560 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 HOOK2Q96ED9 719 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 CLMNQ96JQ2 1002 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 BEGAINQ9BUH8 593 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 IDI2Q9BXS1 227 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 AATFQ9NY61 560 aaKnown RBP eCLIP19.16■□□□□ 0.66
LMX1A-204ENST00000489443 MAST2Q6P0Q8 1798 aa19.16■□□□□ 0.66
LMX1A-204ENST00000489443 ENTPD3O75355 529 aa19.15■□□□□ 0.66
LMX1A-204ENST00000489443 BAG3O95817 575 aa19.15■□□□□ 0.66
LMX1A-204ENST00000489443 HDAC1Q13547 482 aaPredicted RBP19.15■□□□□ 0.66
LMX1A-204ENST00000489443 MIGA2Q7L4E1 593 aa19.15■□□□□ 0.66
LMX1A-204ENST00000489443 ZSCAN29Q8IWY8 852 aaPredicted RBP19.15■□□□□ 0.66
LMX1A-204ENST00000489443 TEX11Q8IYF3 940 aa19.15■□□□□ 0.66
LMX1A-204ENST00000489443 MAGEB6Q8N7X4 407 aa19.15■□□□□ 0.66
LMX1A-204ENST00000489443 EDC3Q96F86 508 aaKnown RBP19.15■□□□□ 0.66
LMX1A-204ENST00000489443 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
LMX1A-204ENST00000489443 ZBTB47Q9UFB7 747 aaPredicted RBP19.15■□□□□ 0.66
LMX1A-204ENST00000489443 IGSF3O75054 1194 aa19.14■□□□□ 0.65
LMX1A-204ENST00000489443 MAP4K4O95819 1239 aaPredicted RBP19.14■□□□□ 0.65
LMX1A-204ENST00000489443 ANKRD13AQ8IZ07 590 aa19.14■□□□□ 0.65
LMX1A-204ENST00000489443 SH3RF3Q8TEJ3 882 aaPredicted RBP19.14■□□□□ 0.65
LMX1A-204ENST00000489443 GPATCH3Q96I76 525 aa19.14■□□□□ 0.65
LMX1A-204ENST00000489443 ECHDC1Q9NTX5 307 aa19.14■□□□□ 0.65
LMX1A-204ENST00000489443 PAG1Q9NWQ8 432 aa19.14■□□□□ 0.65
LMX1A-204ENST00000489443 RPAP1Q9BWH6 1393 aaPredicted RBP19.14■□□□□ 0.65
LMX1A-204ENST00000489443 DOCK2Q92608 1830 aa19.14■□□□□ 0.65
LMX1A-204ENST00000489443 FOXN1O15353 648 aa19.13■□□□□ 0.65
LMX1A-204ENST00000489443 PLCG2P16885 1265 aa19.13■□□□□ 0.65
LMX1A-204ENST00000489443 MAP3K9P80192 1104 aa19.13■□□□□ 0.65
LMX1A-204ENST00000489443 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
LMX1A-204ENST00000489443 DCAF15Q66K64 600 aa19.13■□□□□ 0.65
LMX1A-204ENST00000489443 HAUS7Q99871 368 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms