RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 GSTO1P78417 241 aa16.38■□□□□ 0.21
CCL28-202ENST00000489442 TMEM39BQ9GZU3 492 aa16.38■□□□□ 0.21
CCL28-202ENST00000489442 USP40Q9NVE5 1235 aa16.38■□□□□ 0.21
CCL28-202ENST00000489442 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
CCL28-202ENST00000489442 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
CCL28-202ENST00000489442 AKAP11Q9UKA4 1901 aa16.37■□□□□ 0.21
CCL28-202ENST00000489442 LDHCP07864 332 aa16.37■□□□□ 0.21
CCL28-202ENST00000489442 MECOMQ03112 1051 aa16.37■□□□□ 0.21
CCL28-202ENST00000489442 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
CCL28-202ENST00000489442 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
CCL28-202ENST00000489442 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
CCL28-202ENST00000489442 WBP1LQ9NX94 342 aa16.37■□□□□ 0.21
CCL28-202ENST00000489442 IREB2P48200 963 aaKnown RBP16.36■□□□□ 0.21
CCL28-202ENST00000489442 FAM83AQ86UY5 434 aa16.36■□□□□ 0.21
CCL28-202ENST00000489442 FZD1Q9UP38 647 aa16.36■□□□□ 0.21
CCL28-202ENST00000489442 SLC10A3P09131 477 aa16.35■□□□□ 0.21
CCL28-202ENST00000489442 ZAP70P43403 619 aa16.35■□□□□ 0.21
CCL28-202ENST00000489442 HOOK2Q96ED9 719 aa16.35■□□□□ 0.21
CCL28-202ENST00000489442 SLC10A4Q96EP9 437 aa16.35■□□□□ 0.21
CCL28-202ENST00000489442 FAM163AQ96GL9 167 aaPredicted RBP16.35■□□□□ 0.21
CCL28-202ENST00000489442 CRBNQ96SW2 442 aa16.35■□□□□ 0.21
CCL28-202ENST00000489442 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
CCL28-202ENST00000489442 MYO5AQ9Y4I1 1855 aaKnown RBP16.35■□□□□ 0.21
CCL28-202ENST00000489442 MROH7-TTC4A0A0A0MT08 1334 aa16.34■□□□□ 0.21
CCL28-202ENST00000489442 FAM155AB1AL88 458 aaPredicted RBP16.34■□□□□ 0.21
CCL28-202ENST00000489442 FOXN1O15353 648 aa16.34■□□□□ 0.21
CCL28-202ENST00000489442 BTDP43251 543 aa16.34■□□□□ 0.21
CCL28-202ENST00000489442 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
CCL28-202ENST00000489442 TCP10Q12799 353 aa16.34■□□□□ 0.21
CCL28-202ENST00000489442 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
CCL28-202ENST00000489442 NSUN4Q96CB9 384 aaKnown RBP16.34■□□□□ 0.21
CCL28-202ENST00000489442 TEPSINQ96N21 525 aa16.34■□□□□ 0.21
CCL28-202ENST00000489442 LRRCC1Q9C099 1032 aa16.34■□□□□ 0.21
CCL28-202ENST00000489442 GAKO14976 1311 aa16.33■□□□□ 0.21
CCL28-202ENST00000489442 THSD7BQ9C0I4 1608 aa16.33■□□□□ 0.2
CCL28-202ENST00000489442 USP2O75604 605 aaPredicted RBP16.33■□□□□ 0.2
CCL28-202ENST00000489442 CYP2E1P05181 493 aaPredicted RBP16.33■□□□□ 0.2
CCL28-202ENST00000489442 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.2
CCL28-202ENST00000489442 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
CCL28-202ENST00000489442 LDLRAD1Q5T700 205 aa16.33■□□□□ 0.2
CCL28-202ENST00000489442 NAA16Q6N069 864 aaPredicted RBP16.33■□□□□ 0.2
CCL28-202ENST00000489442 FAM151AQ8WW52 585 aa16.33■□□□□ 0.2
CCL28-202ENST00000489442 ZIC5Q96T25 663 aa16.33■□□□□ 0.2
CCL28-202ENST00000489442 SSC5DA1L4H1 1573 aa16.33■□□□□ 0.2
CCL28-202ENST00000489442 NFIAQ12857 509 aa16.32■□□□□ 0.2
CCL28-202ENST00000489442 CDAN1Q8IWY9 1227 aa16.32■□□□□ 0.2
CCL28-202ENST00000489442 ANKRD13AQ8IZ07 590 aa16.32■□□□□ 0.2
CCL28-202ENST00000489442 GPR75-ASB3A0A0A6YYF3 556 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 UNCXA6NJT0 531 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 CA12O43570 354 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 IDH1O75874 414 aaKnown RBP16.31■□□□□ 0.2
CCL28-202ENST00000489442 BAG3O95817 575 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 RGS3P49796 1198 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 MKRN3Q13064 507 aaKnown RBP16.31■□□□□ 0.2
CCL28-202ENST00000489442 DCAF15Q66K64 600 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 ZSCAN29Q8IWY8 852 aaPredicted RBP16.31■□□□□ 0.2
CCL28-202ENST00000489442 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
CCL28-202ENST00000489442 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
CCL28-202ENST00000489442 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
CCL28-202ENST00000489442 IGSF3O75054 1194 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 PICALMQ13492 652 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 ZNF384Q8TF68 577 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 CLMNQ96JQ2 1002 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 IDI2Q9BXS1 227 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 PIH1D3Q9NQM4 214 aaKnown RBP16.3■□□□□ 0.2
CCL28-202ENST00000489442 FAM198AQ9UFP1 575 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 CSADQ9Y600 493 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 NDUFB9Q9Y6M9 179 aa16.3■□□□□ 0.2
CCL28-202ENST00000489442 RPAP1Q9BWH6 1393 aaPredicted RBP16.29■□□□□ 0.2
CCL28-202ENST00000489442 MAST2Q6P0Q8 1798 aa16.29■□□□□ 0.2
CCL28-202ENST00000489442 ENTPD3O75355 529 aa16.29■□□□□ 0.2
CCL28-202ENST00000489442 MAP4K4O95819 1239 aaPredicted RBP16.29■□□□□ 0.2
CCL28-202ENST00000489442 MAP3K9P80192 1104 aa16.29■□□□□ 0.2
CCL28-202ENST00000489442 MAP3K12Q12852 859 aa16.29■□□□□ 0.2
CCL28-202ENST00000489442 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
CCL28-202ENST00000489442 MIGA2Q7L4E1 593 aa16.29■□□□□ 0.2
CCL28-202ENST00000489442 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
CCL28-202ENST00000489442 DNAJC2Q99543 621 aaKnown RBP16.29■□□□□ 0.2
CCL28-202ENST00000489442 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
CCL28-202ENST00000489442 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
CCL28-202ENST00000489442 PLCG2P16885 1265 aa16.28■□□□□ 0.2
CCL28-202ENST00000489442 CYP7A1P22680 504 aa16.28■□□□□ 0.2
CCL28-202ENST00000489442 LBX1P52954 281 aa16.28■□□□□ 0.2
CCL28-202ENST00000489442 SPRYD7Q5W111 196 aa16.28■□□□□ 0.2
CCL28-202ENST00000489442 TEX11Q8IYF3 940 aa16.28■□□□□ 0.2
CCL28-202ENST00000489442 ZNF341Q9BYN7 854 aa16.28■□□□□ 0.2
CCL28-202ENST00000489442 AATFQ9NY61 560 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCL28-202ENST00000489442 OTOFQ9HC10 1997 aa16.28■□□□□ 0.2
CCL28-202ENST00000489442 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
CCL28-202ENST00000489442 RHBDL3P58872 404 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 SREBF2Q12772 1141 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 AAMPQ13685 434 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 ZFPM1Q8IX07 1006 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 MAGEB6Q8N7X4 407 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCL28-202ENST00000489442 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 WRNIP1Q96S55 665 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 BOLA2Q9H3K6 86 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 ANTXR1Q9H6X2 564 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms