RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
BRCA1-218ENST00000489037 USP40Q9NVE5 1235 aa17.48■□□□□ 0.39
BRCA1-218ENST00000489037 DBNLQ9UJU6 430 aaKnown RBP17.48■□□□□ 0.39
BRCA1-218ENST00000489037 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
BRCA1-218ENST00000489037 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
BRCA1-218ENST00000489037 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
BRCA1-218ENST00000489037 CDC42EP5Q6NZY7 148 aa17.47■□□□□ 0.39
BRCA1-218ENST00000489037 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
BRCA1-218ENST00000489037 NOL10Q9BSC4 688 aaKnown RBP17.47■□□□□ 0.39
BRCA1-218ENST00000489037 TMEM39BQ9GZU3 492 aa17.47■□□□□ 0.39
BRCA1-218ENST00000489037 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
BRCA1-218ENST00000489037 SNRKQ9NRH2 765 aa17.47■□□□□ 0.39
BRCA1-218ENST00000489037 UNCXA6NJT0 531 aa17.46■□□□□ 0.39
BRCA1-218ENST00000489037 FAM155AB1AL88 458 aaPredicted RBP17.46■□□□□ 0.39
BRCA1-218ENST00000489037 KIF23Q02241 960 aaPredicted RBP17.46■□□□□ 0.39
BRCA1-218ENST00000489037 MECOMQ03112 1051 aa17.46■□□□□ 0.39
BRCA1-218ENST00000489037 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
BRCA1-218ENST00000489037 PI16Q6UXB8 463 aa17.46■□□□□ 0.39
BRCA1-218ENST00000489037 TBC1D9Q6ZT07 1266 aa17.46■□□□□ 0.39
BRCA1-218ENST00000489037 RASAL3Q86YV0 1011 aa17.46■□□□□ 0.39
BRCA1-218ENST00000489037 SLC10A4Q96EP9 437 aa17.46■□□□□ 0.39
BRCA1-218ENST00000489037 FAM163AQ96GL9 167 aaPredicted RBP17.46■□□□□ 0.39
BRCA1-218ENST00000489037 FOXN1O15353 648 aa17.45■□□□□ 0.38
BRCA1-218ENST00000489037 CA12O43570 354 aa17.45■□□□□ 0.38
BRCA1-218ENST00000489037 IGSF3O75054 1194 aa17.45■□□□□ 0.38
BRCA1-218ENST00000489037 LDLRAD1Q5T700 205 aa17.45■□□□□ 0.38
BRCA1-218ENST00000489037 FAM151AQ8WW52 585 aa17.45■□□□□ 0.38
BRCA1-218ENST00000489037 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
BRCA1-218ENST00000489037 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
BRCA1-218ENST00000489037 MROH7-TTC4A0A0A0MT08 1334 aa17.45■□□□□ 0.38
BRCA1-218ENST00000489037 GAKO14976 1311 aa17.45■□□□□ 0.38
BRCA1-218ENST00000489037 BTDP43251 543 aa17.44■□□□□ 0.38
BRCA1-218ENST00000489037 DCAF15Q66K64 600 aa17.44■□□□□ 0.38
BRCA1-218ENST00000489037 ANKRD13AQ8IZ07 590 aa17.44■□□□□ 0.38
BRCA1-218ENST00000489037 NSUN4Q96CB9 384 aaKnown RBP17.44■□□□□ 0.38
BRCA1-218ENST00000489037 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
BRCA1-218ENST00000489037 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
BRCA1-218ENST00000489037 PCNTO95613 3336 aa17.43■□□□□ 0.38
BRCA1-218ENST00000489037 USP2O75604 605 aaPredicted RBP17.43■□□□□ 0.38
BRCA1-218ENST00000489037 MAP4K4O95819 1239 aaPredicted RBP17.43■□□□□ 0.38
BRCA1-218ENST00000489037 ZAP70P43403 619 aa17.43■□□□□ 0.38
BRCA1-218ENST00000489037 TCP10Q12799 353 aa17.43■□□□□ 0.38
BRCA1-218ENST00000489037 NAA16Q6N069 864 aaPredicted RBP17.43■□□□□ 0.38
BRCA1-218ENST00000489037 FZD1Q9UP38 647 aa17.43■□□□□ 0.38
BRCA1-218ENST00000489037 MYO5AQ9Y4I1 1855 aaKnown RBP17.43■□□□□ 0.38
BRCA1-218ENST00000489037 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
BRCA1-218ENST00000489037 SSC5DA1L4H1 1573 aa17.42■□□□□ 0.38
BRCA1-218ENST00000489037 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
BRCA1-218ENST00000489037 BAG3O95817 575 aa17.42■□□□□ 0.38
BRCA1-218ENST00000489037 CYP2E1P05181 493 aaPredicted RBP17.42■□□□□ 0.38
BRCA1-218ENST00000489037 ENTPD3O75355 529 aa17.41■□□□□ 0.38
BRCA1-218ENST00000489037 ZSCAN29Q8IWY8 852 aaPredicted RBP17.41■□□□□ 0.38
BRCA1-218ENST00000489037 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
BRCA1-218ENST00000489037 ZIC5Q96T25 663 aa17.41■□□□□ 0.38
BRCA1-218ENST00000489037 IDI2Q9BXS1 227 aa17.41■□□□□ 0.38
BRCA1-218ENST00000489037 CSADQ9Y600 493 aa17.41■□□□□ 0.38
BRCA1-218ENST00000489037 MAST2Q6P0Q8 1798 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
BRCA1-218ENST00000489037 PLCG2P16885 1265 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 RGS3P49796 1198 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 LBX1P52954 281 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 MAP3K12Q12852 859 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 NFIAQ12857 509 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 MKRN3Q13064 507 aaKnown RBP17.4■□□□□ 0.38
BRCA1-218ENST00000489037 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
BRCA1-218ENST00000489037 CDAN1Q8IWY9 1227 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 CSRNP1Q96S65 589 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 ZNF341Q9BYN7 854 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
BRCA1-218ENST00000489037 ZBTB48P10074 688 aaPredicted RBP17.39■□□□□ 0.37
BRCA1-218ENST00000489037 HSPA8P11142 646 aaKnown RBP17.39■□□□□ 0.37
BRCA1-218ENST00000489037 PICALMQ13492 652 aa17.39■□□□□ 0.37
BRCA1-218ENST00000489037 SPRYD7Q5W111 196 aa17.39■□□□□ 0.37
BRCA1-218ENST00000489037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.39■□□□□ 0.37
BRCA1-218ENST00000489037 CLMNQ96JQ2 1002 aa17.39■□□□□ 0.37
BRCA1-218ENST00000489037 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
BRCA1-218ENST00000489037 FAM198AQ9UFP1 575 aa17.39■□□□□ 0.37
BRCA1-218ENST00000489037 MANSC4A6NHS7 340 aaPredicted RBP17.38■□□□□ 0.37
BRCA1-218ENST00000489037 INHBEP58166 350 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 AAMPQ13685 434 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 TMED8Q6PL24 325 aaPredicted RBP17.38■□□□□ 0.37
BRCA1-218ENST00000489037 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 ZNF384Q8TF68 577 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 WNK4Q96J92 1243 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 WRNIP1Q96S55 665 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 ELP3Q9H9T3 547 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 PIH1D3Q9NQM4 214 aaKnown RBP17.38■□□□□ 0.37
BRCA1-218ENST00000489037 SAGE1Q9NXZ1 904 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 OTOFQ9HC10 1997 aa17.38■□□□□ 0.37
BRCA1-218ENST00000489037 CYP7A1P22680 504 aa17.37■□□□□ 0.37
BRCA1-218ENST00000489037 MIGA2Q7L4E1 593 aa17.37■□□□□ 0.37
BRCA1-218ENST00000489037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.37■□□□□ 0.37
BRCA1-218ENST00000489037 GPATCH3Q96I76 525 aa17.37■□□□□ 0.37
BRCA1-218ENST00000489037 DNAJC2Q99543 621 aaKnown RBP17.37■□□□□ 0.37
BRCA1-218ENST00000489037 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
BRCA1-218ENST00000489037 DOCK2Q92608 1830 aa17.37■□□□□ 0.37
BRCA1-218ENST00000489037 SMARCA5O60264 1052 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms