RNA–Protein interactions for RNA: ENST00000488410.5

TM2D1-209, Transcript of TM2 domain containing 1, humanhuman

TSL 3

Gene TM2D1, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-209ENST00000488410 ZKSCAN4Q969J2 545 aaPredicted RBP12.2□□□□□ -0.46
TM2D1-209ENST00000488410 TMEM106CQ9BVX2 250 aa12.2□□□□□ -0.46
TM2D1-209ENST00000488410 LDHBP07195 334 aaKnown RBP12.19□□□□□ -0.46
TM2D1-209ENST00000488410 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
TM2D1-209ENST00000488410 FAM83AQ86UY5 434 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 ERO1BQ86YB8 467 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
TM2D1-209ENST00000488410 BRI3BPQ8WY22 251 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 MS4A4AQ96JQ5 239 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 ZNF341Q9BYN7 854 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
TM2D1-209ENST00000488410 USP40Q9NVE5 1235 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 OTOFQ9HC10 1997 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 ARAP2Q8WZ64 1704 aa12.19□□□□□ -0.46
TM2D1-209ENST00000488410 ECM2O94769 699 aaPredicted RBP12.18□□□□□ -0.46
TM2D1-209ENST00000488410 FGFR2P21802 821 aa12.18□□□□□ -0.46
TM2D1-209ENST00000488410 SNAPC2Q13487 334 aa12.18□□□□□ -0.46
TM2D1-209ENST00000488410 FKBP1CQ5VVH2 108 aa12.18□□□□□ -0.46
TM2D1-209ENST00000488410 APOBEC3HQ6NTF7 200 aaKnown RBP12.18□□□□□ -0.46
TM2D1-209ENST00000488410 TNRC18O15417 2968 aaPredicted RBP12.18□□□□□ -0.46
TM2D1-209ENST00000488410 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 CIAO1O76071 339 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
TM2D1-209ENST00000488410 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
TM2D1-209ENST00000488410 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
TM2D1-209ENST00000488410 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 DENND2AQ9ULE3 1009 aa12.17□□□□□ -0.46
TM2D1-209ENST00000488410 LRRFIP2Q9Y608 721 aaKnown RBP12.17□□□□□ -0.46
TM2D1-209ENST00000488410 MYH2Q9UKX2 1941 aa12.16□□□□□ -0.46
TM2D1-209ENST00000488410 IRF6O14896 467 aa12.16□□□□□ -0.46
TM2D1-209ENST00000488410 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
TM2D1-209ENST00000488410 GORABQ5T7V8 394 aa12.16□□□□□ -0.46
TM2D1-209ENST00000488410 CDC42EP5Q6NZY7 148 aa12.16□□□□□ -0.46
TM2D1-209ENST00000488410 ATG9AQ7Z3C6 839 aa12.16□□□□□ -0.46
TM2D1-209ENST00000488410 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
TM2D1-209ENST00000488410 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
TM2D1-209ENST00000488410 ABCF2Q9UG63 623 aa12.16□□□□□ -0.46
TM2D1-209ENST00000488410 SNCAIPQ9Y6H5 919 aa12.16□□□□□ -0.46
TM2D1-209ENST00000488410 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
TM2D1-209ENST00000488410 LAMB1P07942 1786 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 BTBD19C9JJ37 291 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 SEMA3EO15041 775 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 CT47B1P0C2W7 299 aaPredicted RBP12.15□□□□□ -0.46
TM2D1-209ENST00000488410 PPATQ06203 517 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 PPIL2Q13356 520 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 DIXDC1Q155Q3 683 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 DZIP1Q86YF9 867 aaKnown RBP12.15□□□□□ -0.46
TM2D1-209ENST00000488410 SLF2Q8IX21 1173 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.15□□□□□ -0.46
TM2D1-209ENST00000488410 NEUROD6Q96NK8 337 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 AKAP2Q9Y2D5 859 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 DAGLAQ9Y4D2 1042 aa12.15□□□□□ -0.46
TM2D1-209ENST00000488410 IPO8O15397 1037 aaKnown RBP12.14□□□□□ -0.47
TM2D1-209ENST00000488410 TLR2O60603 784 aa12.14□□□□□ -0.47
TM2D1-209ENST00000488410 EN2P19622 333 aaPredicted RBP12.14□□□□□ -0.47
TM2D1-209ENST00000488410 INPP5BP32019 993 aa12.14□□□□□ -0.47
TM2D1-209ENST00000488410 TIMM10P62072 90 aa12.14□□□□□ -0.47
TM2D1-209ENST00000488410 SPTY2D1Q68D10 685 aaPredicted RBP12.14□□□□□ -0.47
TM2D1-209ENST00000488410 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
TM2D1-209ENST00000488410 PA2G4Q9UQ80 394 aaKnown RBP12.14□□□□□ -0.47
TM2D1-209ENST00000488410 PDHXO00330 501 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 SRGAP3O43295 1099 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
TM2D1-209ENST00000488410 GNAI3P08754 354 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 HOXD10P28358 340 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 PRDX5P30044 214 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 PHKA1P46020 1223 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 CCDC102BQ68D86 513 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 FRAT1Q92837 279 aaPredicted RBP12.13□□□□□ -0.47
TM2D1-209ENST00000488410 ARMC5Q96C12 935 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 GCC1Q96CN9 775 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 ZCCHC17Q9NP64 241 aaKnown RBP12.13□□□□□ -0.47
TM2D1-209ENST00000488410 CPA4Q9UI42 421 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
TM2D1-209ENST00000488410 GNRH1P01148 92 aa12.12□□□□□ -0.47
TM2D1-209ENST00000488410 ADORA1P30542 326 aa12.12□□□□□ -0.47
TM2D1-209ENST00000488410 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
TM2D1-209ENST00000488410 NFIAQ12857 509 aa12.12□□□□□ -0.47
TM2D1-209ENST00000488410 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
TM2D1-209ENST00000488410 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
TM2D1-209ENST00000488410 MEIS3Q99687 375 aa12.12□□□□□ -0.47
TM2D1-209ENST00000488410 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
TM2D1-209ENST00000488410 BIN2Q9UBW5 565 aaPredicted RBP12.12□□□□□ -0.47
TM2D1-209ENST00000488410 PSMC4P43686 418 aa12.11□□□□□ -0.47
TM2D1-209ENST00000488410 RGS3P49796 1198 aa12.11□□□□□ -0.47
TM2D1-209ENST00000488410 PRMT2P55345 433 aa12.11□□□□□ -0.47
TM2D1-209ENST00000488410 TFCP2Q12800 502 aa12.11□□□□□ -0.47
TM2D1-209ENST00000488410 G3BP1Q13283 466 aaKnown RBP eCLIP12.11□□□□□ -0.47
TM2D1-209ENST00000488410 PICALMQ13492 652 aa12.11□□□□□ -0.47
TM2D1-209ENST00000488410 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
TM2D1-209ENST00000488410 ANKRD23Q86SG2 305 aa12.11□□□□□ -0.47
TM2D1-209ENST00000488410 ZFPM1Q8IX07 1006 aa12.11□□□□□ -0.47
TM2D1-209ENST00000488410 RAET1EQ8TD07 263 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms