RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 RLBP1P12271 317 aa23.58■■□□□ 1.37
CLIP2-206ENST00000487091 GJA5P36382 358 aa23.58■■□□□ 1.37
CLIP2-206ENST00000487091 CDC42EP5Q6NZY7 148 aa23.58■■□□□ 1.37
CLIP2-206ENST00000487091 CTU1Q7Z7A3 348 aaKnown RBP23.58■■□□□ 1.37
CLIP2-206ENST00000487091 ITPRIPQ8IWB1 547 aa23.58■■□□□ 1.37
CLIP2-206ENST00000487091 SSH3Q8TE77 659 aa23.58■■□□□ 1.37
CLIP2-206ENST00000487091 FAM151AQ8WW52 585 aa23.58■■□□□ 1.37
CLIP2-206ENST00000487091 CCDC85CA6NKD9 419 aa23.57■■□□□ 1.36
CLIP2-206ENST00000487091 GPR25O00155 361 aa23.57■■□□□ 1.36
CLIP2-206ENST00000487091 SPTY2D1Q68D10 685 aaPredicted RBP23.57■■□□□ 1.36
CLIP2-206ENST00000487091 ZNF296Q8WUU4 475 aaPredicted RBP23.57■■□□□ 1.36
CLIP2-206ENST00000487091 ELP3Q9H9T3 547 aa23.57■■□□□ 1.36
CLIP2-206ENST00000487091 CSADQ9Y600 493 aa23.57■■□□□ 1.36
CLIP2-206ENST00000487091 TESPA1A2RU30 521 aaPredicted RBP23.56■■□□□ 1.36
CLIP2-206ENST00000487091 VGLL4Q14135 290 aa23.56■■□□□ 1.36
CLIP2-206ENST00000487091 SLF2Q8IX21 1173 aa23.56■■□□□ 1.36
CLIP2-206ENST00000487091 OPTNQ96CV9 577 aa23.56■■□□□ 1.36
CLIP2-206ENST00000487091 FAM163AQ96GL9 167 aaPredicted RBP23.56■■□□□ 1.36
CLIP2-206ENST00000487091 USP40Q9NVE5 1235 aa23.56■■□□□ 1.36
CLIP2-206ENST00000487091 MYH2Q9UKX2 1941 aa23.56■■□□□ 1.36
CLIP2-206ENST00000487091 GORABQ5T7V8 394 aa23.55■■□□□ 1.36
CLIP2-206ENST00000487091 DCAF15Q66K64 600 aa23.55■■□□□ 1.36
CLIP2-206ENST00000487091 OTUD7BQ6GQQ9 843 aa23.55■■□□□ 1.36
CLIP2-206ENST00000487091 GPR108Q9NPR9 543 aa23.55■■□□□ 1.36
CLIP2-206ENST00000487091 ABCF2Q9UG63 623 aa23.55■■□□□ 1.36
CLIP2-206ENST00000487091 GAKO14976 1311 aa23.55■■□□□ 1.36
CLIP2-206ENST00000487091 IGF2BP3O00425 579 aaKnown RBP eCLIP23.54■■□□□ 1.36
CLIP2-206ENST00000487091 DZIP1Q86YF9 867 aaKnown RBP23.54■■□□□ 1.36
CLIP2-206ENST00000487091 ARID4AP29374 1257 aaPredicted RBP23.53■■□□□ 1.36
CLIP2-206ENST00000487091 NFIAQ12857 509 aa23.53■■□□□ 1.36
CLIP2-206ENST00000487091 PKN2Q16513 984 aaKnown RBP23.53■■□□□ 1.36
CLIP2-206ENST00000487091 MS4A4AQ96JQ5 239 aa23.53■■□□□ 1.36
CLIP2-206ENST00000487091 WRNIP1Q96S55 665 aa23.53■■□□□ 1.36
CLIP2-206ENST00000487091 R3HDMLQ9H3Y0 253 aa23.53■■□□□ 1.36
CLIP2-206ENST00000487091 C1orf115Q9H7X2 142 aa23.53■■□□□ 1.36
CLIP2-206ENST00000487091 HMG20BQ9P0W2 317 aa23.53■■□□□ 1.36
CLIP2-206ENST00000487091 FAM198AQ9UFP1 575 aa23.53■■□□□ 1.36
CLIP2-206ENST00000487091 NOP58Q9Y2X3 529 aaKnown RBP23.53■■□□□ 1.36
CLIP2-206ENST00000487091 FKTNO75072 461 aa23.52■■□□□ 1.36
CLIP2-206ENST00000487091 SURF6O75683 361 aaKnown RBP23.52■■□□□ 1.36
CLIP2-206ENST00000487091 UQCRFS1P1P0C7P4 283 aa23.52■■□□□ 1.36
CLIP2-206ENST00000487091 TCP10Q12799 353 aa23.52■■□□□ 1.36
CLIP2-206ENST00000487091 ERICH6Q7L0X2 663 aa23.52■■□□□ 1.36
CLIP2-206ENST00000487091 SPATA5Q8NB90 893 aa23.52■■□□□ 1.36
CLIP2-206ENST00000487091 IDI2Q9BXS1 227 aa23.52■■□□□ 1.36
CLIP2-206ENST00000487091 ZNF341Q9BYN7 854 aa23.52■■□□□ 1.36
CLIP2-206ENST00000487091 AK9Q5TCS8 1911 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 SPDYE5A6NIY4 337 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 MS4A1P11836 297 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 GTF2A2P52657 109 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 ERO1BQ86YB8 467 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 CNKSR2Q8WXI2 1034 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 PTPN18Q99952 460 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 SNCAIPQ9Y6H5 919 aa23.51■■□□□ 1.35
CLIP2-206ENST00000487091 ENTPD3O75355 529 aa23.5■■□□□ 1.35
CLIP2-206ENST00000487091 OS9Q13438 667 aaPredicted RBP23.5■■□□□ 1.35
CLIP2-206ENST00000487091 MIGA2Q7L4E1 593 aa23.5■■□□□ 1.35
CLIP2-206ENST00000487091 RGS19P49795 217 aa23.49■■□□□ 1.35
CLIP2-206ENST00000487091 MECOMQ03112 1051 aa23.49■■□□□ 1.35
CLIP2-206ENST00000487091 TNNI3KQ59H18 835 aa23.49■■□□□ 1.35
CLIP2-206ENST00000487091 ZKSCAN4Q969J2 545 aaPredicted RBP23.49■■□□□ 1.35
CLIP2-206ENST00000487091 OTUD5Q96G74 571 aa23.49■■□□□ 1.35
CLIP2-206ENST00000487091 ZNF112Q9UJU3 913 aa23.49■■□□□ 1.35
CLIP2-206ENST00000487091 FPGT-TNNI3KV9GXZ4 949 aa23.49■■□□□ 1.35
CLIP2-206ENST00000487091 MROH7-TTC4A0A0A0MT08 1334 aa23.49■■□□□ 1.35
CLIP2-206ENST00000487091 PANK1Q8TE04 598 aa23.48■■□□□ 1.35
CLIP2-206ENST00000487091 BRI3BPQ8WY22 251 aa23.48■■□□□ 1.35
CLIP2-206ENST00000487091 GPR75-ASB3A0A0A6YYF3 556 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 LDHCP07864 332 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 MCAMP43121 646 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 BTDP43251 543 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 RGS3P49796 1198 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 GSTO1P78417 241 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 CCDC158Q5M9N0 1113 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 CEP85Q6P2H3 762 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 PI16Q6UXB8 463 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 ZFPM1Q8IX07 1006 aa23.47■■□□□ 1.35
CLIP2-206ENST00000487091 CCL15-CCL14A0A0B4J2E2 113 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 MAP4K4O95819 1239 aaPredicted RBP23.46■■□□□ 1.35
CLIP2-206ENST00000487091 INPP5BP32019 993 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 CRHR2Q13324 411 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 PPIL2Q13356 520 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 CCL15Q16663 113 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 RFX7Q2KHR2 1363 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 TBC1D9Q6ZT07 1266 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 ZNF384Q8TF68 577 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 NSUN4Q96CB9 384 aaKnown RBP23.46■■□□□ 1.35
CLIP2-206ENST00000487091 DBNDD2Q9BQY9 259 aa23.46■■□□□ 1.35
CLIP2-206ENST00000487091 WDHD1O75717 1129 aaPredicted RBP23.45■■□□□ 1.34
CLIP2-206ENST00000487091 CETPP11597 493 aa23.45■■□□□ 1.34
CLIP2-206ENST00000487091 PPATQ06203 517 aa23.45■■□□□ 1.34
CLIP2-206ENST00000487091 TTC39AQ5SRH9 613 aa23.45■■□□□ 1.34
CLIP2-206ENST00000487091 ZNF512BQ96KM6 892 aaPredicted RBP23.45■■□□□ 1.34
CLIP2-206ENST00000487091 IRF6O14896 467 aa23.44■■□□□ 1.34
CLIP2-206ENST00000487091 NPM3O75607 178 aaKnown RBP23.44■■□□□ 1.34
CLIP2-206ENST00000487091 RHBDL3P58872 404 aa23.44■■□□□ 1.34
CLIP2-206ENST00000487091 NOL9Q5SY16 702 aaKnown RBP23.44■■□□□ 1.34
CLIP2-206ENST00000487091 RAI14Q9P0K7 980 aa23.44■■□□□ 1.34
CLIP2-206ENST00000487091 IGSF3O75054 1194 aa23.43■■□□□ 1.34
CLIP2-206ENST00000487091 MAP3K10Q02779 954 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms