RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
VARS-225ENST00000482996 SPATA5Q8NB90 893 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 TEPSINQ96N21 525 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
VARS-225ENST00000482996 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
VARS-225ENST00000482996 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
VARS-225ENST00000482996 ANKRD13AQ8IZ07 590 aa17.05■□□□□ 0.32
VARS-225ENST00000482996 DBNDD2Q9BQY9 259 aa17.05■□□□□ 0.32
VARS-225ENST00000482996 USP40Q9NVE5 1235 aa17.05■□□□□ 0.32
VARS-225ENST00000482996 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
VARS-225ENST00000482996 TRPA1O75762 1119 aa17.04■□□□□ 0.32
VARS-225ENST00000482996 SREBF2Q12772 1141 aa17.04■□□□□ 0.32
VARS-225ENST00000482996 MKRN3Q13064 507 aaKnown RBP17.04■□□□□ 0.32
VARS-225ENST00000482996 SPRYD7Q5W111 196 aa17.04■□□□□ 0.32
VARS-225ENST00000482996 CDAN1Q8IWY9 1227 aa17.04■□□□□ 0.32
VARS-225ENST00000482996 CLMNQ96JQ2 1002 aa17.04■□□□□ 0.32
VARS-225ENST00000482996 RNF186Q9NXI6 227 aa17.04■□□□□ 0.32
VARS-225ENST00000482996 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
VARS-225ENST00000482996 RPAP1Q9BWH6 1393 aaPredicted RBP17.03■□□□□ 0.32
VARS-225ENST00000482996 GAKO14976 1311 aa17.03■□□□□ 0.32
VARS-225ENST00000482996 LDHCP07864 332 aa17.03■□□□□ 0.32
VARS-225ENST00000482996 MCAMP43121 646 aa17.03■□□□□ 0.32
VARS-225ENST00000482996 GSTO1P78417 241 aa17.03■□□□□ 0.32
VARS-225ENST00000482996 PI16Q6UXB8 463 aa17.03■□□□□ 0.32
VARS-225ENST00000482996 FAM151AQ8WW52 585 aa17.03■□□□□ 0.32
VARS-225ENST00000482996 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
VARS-225ENST00000482996 ZBTB48P10074 688 aaPredicted RBP17.02■□□□□ 0.32
VARS-225ENST00000482996 MAP3K9P80192 1104 aa17.02■□□□□ 0.32
VARS-225ENST00000482996 MECOMQ03112 1051 aa17.02■□□□□ 0.32
VARS-225ENST00000482996 DCAF15Q66K64 600 aa17.02■□□□□ 0.32
VARS-225ENST00000482996 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
VARS-225ENST00000482996 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.32
VARS-225ENST00000482996 RAI14Q9P0K7 980 aa17.02■□□□□ 0.32
VARS-225ENST00000482996 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
VARS-225ENST00000482996 AKAP11Q9UKA4 1901 aa17.02■□□□□ 0.31
VARS-225ENST00000482996 MROH7-TTC4A0A0A0MT08 1334 aa17.01■□□□□ 0.31
VARS-225ENST00000482996 MANSC4A6NHS7 340 aaPredicted RBP17.01■□□□□ 0.31
VARS-225ENST00000482996 TM4SF4P48230 202 aa17.01■□□□□ 0.31
VARS-225ENST00000482996 TCP10Q12799 353 aa17.01■□□□□ 0.31
VARS-225ENST00000482996 C20orf194Q5TEA3 1177 aa17.01■□□□□ 0.31
VARS-225ENST00000482996 TBC1D9Q6ZT07 1266 aa17.01■□□□□ 0.31
VARS-225ENST00000482996 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
VARS-225ENST00000482996 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
VARS-225ENST00000482996 SNRKQ9NRH2 765 aa17.01■□□□□ 0.31
VARS-225ENST00000482996 DBNLQ9UJU6 430 aaKnown RBP17.01■□□□□ 0.31
VARS-225ENST00000482996 CSADQ9Y600 493 aa17.01■□□□□ 0.31
VARS-225ENST00000482996 MYH2Q9UKX2 1941 aa17■□□□□ 0.31
VARS-225ENST00000482996 BTDP43251 543 aa17■□□□□ 0.31
VARS-225ENST00000482996 INHBEP58166 350 aa17■□□□□ 0.31
VARS-225ENST00000482996 NFIAQ12857 509 aa17■□□□□ 0.31
VARS-225ENST00000482996 AACSQ86V21 672 aa17■□□□□ 0.31
VARS-225ENST00000482996 NSUN4Q96CB9 384 aaKnown RBP17■□□□□ 0.31
VARS-225ENST00000482996 ELP3Q9H9T3 547 aa17■□□□□ 0.31
VARS-225ENST00000482996 GPR75-ASB3A0A0A6YYF3 556 aa16.99■□□□□ 0.31
VARS-225ENST00000482996 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.99■□□□□ 0.31
VARS-225ENST00000482996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.99■□□□□ 0.31
VARS-225ENST00000482996 RHPN1Q8TCX5 695 aa16.99■□□□□ 0.31
VARS-225ENST00000482996 KIF1BPQ96EK5 621 aa16.99■□□□□ 0.31
VARS-225ENST00000482996 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
VARS-225ENST00000482996 IDI2Q9BXS1 227 aa16.99■□□□□ 0.31
VARS-225ENST00000482996 ZNF341Q9BYN7 854 aa16.99■□□□□ 0.31
VARS-225ENST00000482996 TLR7Q9NYK1 1049 aaKnown RBP16.99■□□□□ 0.31
VARS-225ENST00000482996 FAM198AQ9UFP1 575 aa16.99■□□□□ 0.31
VARS-225ENST00000482996 IGSF3O75054 1194 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 RAB11FIP3O75154 756 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 ENTPD3O75355 529 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 MAP4K4O95819 1239 aaPredicted RBP16.98■□□□□ 0.31
VARS-225ENST00000482996 RGS3P49796 1198 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 VGLL4Q14135 290 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 SIRT2Q8IXJ6 389 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
VARS-225ENST00000482996 OPTNQ96CV9 577 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 WRNIP1Q96S55 665 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 NOL10Q9BSC4 688 aaKnown RBP16.98■□□□□ 0.31
VARS-225ENST00000482996 IL1RAPL2Q9NP60 686 aa16.98■□□□□ 0.31
VARS-225ENST00000482996 APBB1O00213 710 aa16.97■□□□□ 0.31
VARS-225ENST00000482996 ALDH1A1P00352 501 aa16.97■□□□□ 0.31
VARS-225ENST00000482996 CYP2E1P05181 493 aaPredicted RBP16.97■□□□□ 0.31
VARS-225ENST00000482996 ZAP70P43403 619 aa16.97■□□□□ 0.31
VARS-225ENST00000482996 NAA16Q6N069 864 aaPredicted RBP16.97■□□□□ 0.31
VARS-225ENST00000482996 MIGA2Q7L4E1 593 aa16.97■□□□□ 0.31
VARS-225ENST00000482996 ZNF384Q8TF68 577 aa16.97■□□□□ 0.31
VARS-225ENST00000482996 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
VARS-225ENST00000482996 GJA5P36382 358 aa16.96■□□□□ 0.31
VARS-225ENST00000482996 OTUD7BQ6GQQ9 843 aa16.96■□□□□ 0.31
VARS-225ENST00000482996 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.31
VARS-225ENST00000482996 AK9Q5TCS8 1911 aa16.96■□□□□ 0.3
VARS-225ENST00000482996 RFX7Q2KHR2 1363 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
VARS-225ENST00000482996 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 BAG3O95817 575 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
VARS-225ENST00000482996 RHBDL3P58872 404 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 PICALMQ13492 652 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 ERO1BQ86YB8 467 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 IFNL1Q8IU54 200 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 OTOFQ9HC10 1997 aa16.95■□□□□ 0.3
VARS-225ENST00000482996 SPDYE5A6NIY4 337 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms