RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RPAP1Q9BWH6 1393 aaPredicted RBP14.6□□□□□ -0.07
HMGN1-213ENST00000482192 HMMRO75330 724 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 USP2O75604 605 aaPredicted RBP14.6□□□□□ -0.07
HMGN1-213ENST00000482192 MCAMP43121 646 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 TTC39AQ5SRH9 613 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 CDC42EP5Q6NZY7 148 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 PI16Q6UXB8 463 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 ERICH6Q7L0X2 663 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 CDAN1Q8IWY9 1227 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 ANKRD13AQ8IZ07 590 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 HOOK2Q96ED9 719 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 SLC10A4Q96EP9 437 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 DBNDD2Q9BQY9 259 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 EXOC6BQ9Y2D4 811 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 PCNTO95613 3336 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 GAKO14976 1311 aa14.6□□□□□ -0.07
HMGN1-213ENST00000482192 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
HMGN1-213ENST00000482192 MECOMQ03112 1051 aa14.59□□□□□ -0.07
HMGN1-213ENST00000482192 C20orf194Q5TEA3 1177 aa14.59□□□□□ -0.07
HMGN1-213ENST00000482192 SPRYD7Q5W111 196 aa14.59□□□□□ -0.07
HMGN1-213ENST00000482192 CLMNQ96JQ2 1002 aa14.59□□□□□ -0.07
HMGN1-213ENST00000482192 ZNF512BQ96KM6 892 aaPredicted RBP14.59□□□□□ -0.07
HMGN1-213ENST00000482192 USP40Q9NVE5 1235 aa14.59□□□□□ -0.07
HMGN1-213ENST00000482192 RNF186Q9NXI6 227 aa14.59□□□□□ -0.07
HMGN1-213ENST00000482192 GSTO1P78417 241 aa14.58□□□□□ -0.08
HMGN1-213ENST00000482192 SREBF2Q12772 1141 aa14.58□□□□□ -0.08
HMGN1-213ENST00000482192 MKRN3Q13064 507 aaKnown RBP14.58□□□□□ -0.08
HMGN1-213ENST00000482192 FAM151AQ8WW52 585 aa14.58□□□□□ -0.08
HMGN1-213ENST00000482192 EAF2Q96CJ1 260 aaPredicted RBP14.58□□□□□ -0.08
HMGN1-213ENST00000482192 FAM163AQ96GL9 167 aaPredicted RBP14.58□□□□□ -0.08
HMGN1-213ENST00000482192 DBNLQ9UJU6 430 aaKnown RBP14.58□□□□□ -0.08
HMGN1-213ENST00000482192 MROH7-TTC4A0A0A0MT08 1334 aa14.58□□□□□ -0.08
HMGN1-213ENST00000482192 TRPA1O75762 1119 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 TM4SF4P48230 202 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 NFIAQ12857 509 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 DCAF15Q66K64 600 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 TBC1D9Q6ZT07 1266 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGN1-213ENST00000482192 WNK4Q96J92 1243 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 TLR7Q9NYK1 1049 aaKnown RBP14.57□□□□□ -0.08
HMGN1-213ENST00000482192 RAI14Q9P0K7 980 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.57□□□□□ -0.08
HMGN1-213ENST00000482192 LRP2BPQ9P2M1 347 aa14.57□□□□□ -0.08
HMGN1-213ENST00000482192 MANSC4A6NHS7 340 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-213ENST00000482192 LDHCP07864 332 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 BTDP43251 543 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 MAP3K9P80192 1104 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 TCP10Q12799 353 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 AACSQ86V21 672 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 RHPN1Q8TCX5 695 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 NSUN4Q96CB9 384 aaKnown RBP14.56□□□□□ -0.08
HMGN1-213ENST00000482192 YTHDC1Q96MU7 727 aaKnown RBP14.56□□□□□ -0.08
HMGN1-213ENST00000482192 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 CCDC8Q9H0W5 538 aaPredicted RBP14.56□□□□□ -0.08
HMGN1-213ENST00000482192 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 FAM198AQ9UFP1 575 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 CSADQ9Y600 493 aa14.56□□□□□ -0.08
HMGN1-213ENST00000482192 GPR75-ASB3A0A0A6YYF3 556 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 IGSF3O75054 1194 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 ENTPD3O75355 529 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 INHBEP58166 350 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 VGLL4Q14135 290 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.55□□□□□ -0.08
HMGN1-213ENST00000482192 ZNF384Q8TF68 577 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 KIF1BPQ96EK5 621 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 ELP3Q9H9T3 547 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 RFX7Q2KHR2 1363 aa14.55□□□□□ -0.08
HMGN1-213ENST00000482192 OTOFQ9HC10 1997 aa14.54□□□□□ -0.08
HMGN1-213ENST00000482192 RAB11FIP3O75154 756 aa14.54□□□□□ -0.08
HMGN1-213ENST00000482192 MAP4K4O95819 1239 aaPredicted RBP14.54□□□□□ -0.08
HMGN1-213ENST00000482192 RGS3P49796 1198 aa14.54□□□□□ -0.08
HMGN1-213ENST00000482192 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
HMGN1-213ENST00000482192 OPTNQ96CV9 577 aa14.54□□□□□ -0.08
HMGN1-213ENST00000482192 WRNIP1Q96S55 665 aa14.54□□□□□ -0.08
HMGN1-213ENST00000482192 ZNF341Q9BYN7 854 aa14.54□□□□□ -0.08
HMGN1-213ENST00000482192 IL1RAPL2Q9NP60 686 aa14.54□□□□□ -0.08
HMGN1-213ENST00000482192 MAST2Q6P0Q8 1798 aa14.53□□□□□ -0.08
HMGN1-213ENST00000482192 APBB1O00213 710 aa14.53□□□□□ -0.08
HMGN1-213ENST00000482192 WDHD1O75717 1129 aaPredicted RBP14.53□□□□□ -0.08
HMGN1-213ENST00000482192 ALDH1A1P00352 501 aa14.53□□□□□ -0.08
HMGN1-213ENST00000482192 CYP2E1P05181 493 aaPredicted RBP14.53□□□□□ -0.08
HMGN1-213ENST00000482192 ZAP70P43403 619 aa14.53□□□□□ -0.08
HMGN1-213ENST00000482192 MIGA2Q7L4E1 593 aa14.53□□□□□ -0.08
HMGN1-213ENST00000482192 NOL10Q9BSC4 688 aaKnown RBP14.53□□□□□ -0.08
HMGN1-213ENST00000482192 MYH2Q9UKX2 1941 aa14.53□□□□□ -0.08
HMGN1-213ENST00000482192 GJA5P36382 358 aa14.52□□□□□ -0.09
HMGN1-213ENST00000482192 RHBDL3P58872 404 aa14.52□□□□□ -0.09
HMGN1-213ENST00000482192 NAA16Q6N069 864 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-213ENST00000482192 ZSCAN29Q8IWY8 852 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-213ENST00000482192 ZFPM1Q8IX07 1006 aa14.52□□□□□ -0.09
HMGN1-213ENST00000482192 SNCAIPQ9Y6H5 919 aa14.52□□□□□ -0.09
HMGN1-213ENST00000482192 AKAP11Q9UKA4 1901 aa14.52□□□□□ -0.09
HMGN1-213ENST00000482192 LAMB1P07942 1786 aa14.52□□□□□ -0.09
HMGN1-213ENST00000482192 SPDYE5A6NIY4 337 aa14.51□□□□□ -0.09
HMGN1-213ENST00000482192 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
HMGN1-213ENST00000482192 BAG3O95817 575 aa14.51□□□□□ -0.09
HMGN1-213ENST00000482192 IFIT2P09913 472 aaKnown RBP14.51□□□□□ -0.09
HMGN1-213ENST00000482192 RRP1P56182 461 aaKnown RBP14.51□□□□□ -0.09
HMGN1-213ENST00000482192 PICALMQ13492 652 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms